Os07g0197000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0197000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.05 | 0.779 | 2.84 | -0.0792 | 0.0657 | 1.46 | -0.375 | 6.37 | 0.082 | 10.3 | 80 | 686 | 3.82 | -- |
| 282.06 | 0.782 | 2.84 | -0.256 | 0.112 | 2.4 | -0.56 | -- | 0.104 | 10.2 | 77 | 669 | 3.79 | -- |
| 275.5 | 0.773 | 2.84 | -0.0875 | 0.0806 | 1.41 | -- | 6.54 | 0.0835 | 8.06 | 80 | 685 | 3.82 | -- |
| 282.48 | 0.783 | 2.85 | -0.297 | 0.169 | 2.37 | -- | -- | 0.1 | 7.78 | 77 | 669 | 3.55 | -- |
| 275.87 | 0.774 | 2.84 | -0.0899 | -- | 1.38 | -- | 6.61 | 0.0784 | -- | 79.91 | 685 | 3.84 | -- |
| 313.87 | 0.831 | 2.86 | -0.158 | 0.045 | -- | -0.361 | -- | 0.0315 | 11.5 | -- | -- | -- | -- |
| 314.38 | 0.83 | 2.86 | -0.174 | 0.0571 | -- | -- | -- | 0.0292 | 9.27 | -- | -- | -- | -- |
| 283.91 | 0.785 | 2.84 | -0.299 | -- | 2.33 | -- | -- | 0.114 | -- | 77.08 | 669 | 3.64 | -- |
| 284.86 | 0.786 | 2.83 | -- | 0.167 | 2.33 | -- | -- | 0.143 | 7.23 | 77.97 | 669 | 3.56 | -- |
| 314.57 | 0.829 | 2.86 | -0.174 | -- | -- | -- | -- | 0.0295 | -- | -- | -- | -- | -- |
| 315.18 | 0.83 | 2.85 | -- | 0.0572 | -- | -- | -- | 0.0486 | 9.5 | -- | -- | -- | -- |
| 286.22 | 0.788 | 2.83 | -- | -- | 2.25 | -- | -- | 0.145 | -- | 77.41 | 669 | 3.69 | -- |
| 315.37 | 0.829 | 2.86 | -- | -- | -- | -- | -- | 0.0488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.28 | humidity | 80 | 720 | < th | dose independent | rect. | 2 | 2 |
| 3 | 266.28 | humidity | 80 | 720 | < th | dose dependent | rect. | 2 | 2 |
| 9 | 266.33 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 14 | 267.96 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 36 | 269.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 44 | 269.47 | humidity | 80 | 720 | < th | dose independent | rect. | 23 | 6 |
| 47 | 269.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 69 | 270.03 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 228 | 274.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 234 | 274.99 | humidity | 80 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 235 | 275.00 | humidity | 80 | 90 | < th | dose independent | rect. | 3 | 3 |
| 247 | 275.34 | humidity | 80 | 10 | < th | dose independent | rect. | 3 | 4 |
| 264 | 275.69 | humidity | 80 | 720 | < th | dose independent | sin | 10 | NA |
| 326 | 277.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 344 | 277.85 | humidity | 80 | 720 | > th | dose independent | sin | 9 | NA |
| 583 | 284.90 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 589 | 284.92 | humidity | 70 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 848 | 288.53 | humidity | 90 | 720 | < th | dose dependent | sin | 10 | NA |
| 883 | 288.91 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 7 |
| 884 | 288.94 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 1 |