Os07g0242600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0242600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.02 | 0.274 | 8.97 | 1.19 | 0.669 | -0.7 | -0.102 | -1.11 | 0.569 | 23.4 | 84.64 | 2660 | -- | -- |
| 35.24 | 0.276 | 8.97 | 1.29 | 0.699 | -0.798 | -0.165 | -- | 0.58 | 23.4 | 84.24 | 2649 | -- | -- |
| 34.04 | 0.272 | 8.97 | 1.19 | 0.671 | -0.694 | -- | -1.15 | 0.564 | 23.4 | 83.92 | 2649 | -- | -- |
| 35.36 | 0.277 | 8.96 | 1.31 | 0.684 | -0.806 | -- | -- | 0.583 | 23.4 | 84 | 2654 | -- | -- |
| 56.62 | 0.35 | 8.94 | 1.26 | -- | -0.821 | -- | -0.468 | 0.598 | -- | 84.53 | 3037 | -- | -- |
| 49.24 | 0.329 | 8.96 | 1.22 | 0.57 | -- | -0.282 | -- | 0.592 | 23.2 | -- | -- | -- | -- |
| 49.57 | 0.33 | 8.96 | 1.23 | 0.572 | -- | -- | -- | 0.593 | 23.1 | -- | -- | -- | -- |
| 56.83 | 0.351 | 8.94 | 1.3 | -- | -0.862 | -- | -- | 0.599 | -- | 84 | 3053 | -- | -- |
| 57.38 | 0.353 | 8.97 | -- | 0.591 | -1.32 | -- | -- | 0.526 | 22.8 | 77.3 | 29233 | -- | -- |
| 69.99 | 0.391 | 8.94 | 1.25 | -- | -- | -- | -- | 0.598 | -- | -- | -- | -- | -- |
| 89.64 | 0.443 | 8.99 | -- | 0.584 | -- | -- | -- | 0.456 | 23.2 | -- | -- | -- | -- |
| 77.23 | 0.409 | 8.96 | -- | -- | -1.36 | -- | -- | 0.54 | -- | 77.31 | 28990 | -- | -- |
| 110.96 | 0.492 | 8.97 | -- | -- | -- | -- | -- | 0.46 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.49 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 2 | 33.53 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 3 | 33.53 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 4 | 33.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 6 | 33.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 8 | 33.58 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 12 | 33.75 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 17 | 33.81 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 37 | 33.92 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 39 | 33.92 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 67 | 33.98 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 82 | 33.99 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 104 | 34.10 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 168 | 34.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 190 | 34.24 | humidity | 50 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 192 | 34.24 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 205 | 34.25 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 252 | 34.31 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 272 | 34.31 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 315 | 34.36 | radiation | 20 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 336 | 34.38 | humidity | 70 | 14400 | < th | dose independent | sin | 13 | NA |
| 374 | 34.39 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 413 | 34.41 | humidity | 60 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 502 | 34.51 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 538 | 34.56 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 544 | 34.56 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 587 | 34.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 598 | 34.61 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 631 | 34.63 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 634 | 34.64 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 644 | 34.65 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 657 | 34.65 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 658 | 34.66 | humidity | 70 | 14400 | > th | dose independent | sin | 14 | NA |
| 682 | 34.67 | wind | 9 | 43200 | < th | dose dependent | sin | 7 | NA |
| 751 | 34.72 | wind | 1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 786 | 34.74 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 787 | 34.74 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 819 | 34.76 | humidity | 70 | 14400 | < th | dose dependent | sin | 13 | NA |
| 891 | 34.80 | radiation | 30 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 898 | 34.81 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 899 | 34.81 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 951 | 34.83 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |