Os07g0196300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0196300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.1 | 0.636 | 7.14 | 1.96 | 1.18 | 1.04 | 0.612 | -0.783 | 0.839 | 19.8 | 0.1327 | 90 | -- | -- |
| 185.86 | 0.635 | 7.14 | 1.94 | 1.19 | 1.07 | 0.095 | -- | 0.831 | 19.6 | 0.14 | 93 | -- | -- |
| 183.92 | 0.632 | 7.14 | 1.95 | 1.19 | 1.04 | -- | -0.527 | 0.845 | 19.8 | 0.1342 | 93 | -- | -- |
| 185.61 | 0.635 | 7.14 | 1.93 | 1.24 | 1.07 | -- | -- | 0.845 | 19.6 | 0.1306 | 110 | -- | -- |
| 233.03 | 0.715 | 7.12 | 1.92 | -- | 1.32 | -- | -0.72 | 0.775 | -- | 0.55 | 84 | -- | -- |
| 200.79 | 0.664 | 7.17 | 1.82 | 1.94 | -- | -0.417 | -- | 0.761 | 22.2 | -- | -- | -- | -- |
| 201.48 | 0.665 | 7.17 | 1.84 | 1.95 | -- | -- | -- | 0.762 | 22.2 | -- | -- | -- | -- |
| 232.64 | 0.713 | 7.12 | 1.91 | -- | 1.33 | -- | -- | 0.783 | -- | 0.8688 | 57 | -- | -- |
| 281.72 | 0.782 | 7.19 | -- | 1.34 | 1.04 | -- | -- | 0.654 | 19.7 | 1.65 | 128 | -- | -- |
| 431.27 | 0.97 | 7.12 | 1.87 | -- | -- | -- | -- | 0.765 | -- | -- | -- | -- | -- |
| 290.83 | 0.798 | 7.22 | -- | 1.96 | -- | -- | -- | 0.557 | 22.2 | -- | -- | -- | -- |
| 326.65 | 0.845 | 7.16 | -- | -- | 1.32 | -- | -- | 0.576 | -- | 0.93 | 46 | -- | -- |
| 523.39 | 1.07 | 7.17 | -- | -- | -- | -- | -- | 0.558 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.72 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 2 | 172.10 | radiation | 20.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 4 | 172.69 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 19 |
| 8 | 173.62 | radiation | 10.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 12 | 174.09 | radiation | 1.0 | 90 | > th | dose independent | sin | 9 | NA |
| 15 | 174.14 | radiation | 1.0 | 30 | < th | dose independent | sin | 5 | NA |
| 20 | 174.61 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 21 | 174.68 | radiation | 1.0 | 30 | > th | dose independent | sin | 5 | NA |
| 26 | 174.89 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 27 | 174.89 | radiation | 1.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 43 | 175.41 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 56 | 176.03 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 59 | 176.09 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 16 |
| 65 | 176.32 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 76 | 176.71 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 16 |
| 86 | 176.99 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 87 | 176.99 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 109 | 177.33 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 111 | 177.40 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 115 | 177.47 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 118 | 177.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 119 | 177.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 122 | 177.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 19 |
| 131 | 177.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 133 | 177.79 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 135 | 177.79 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 170 | 177.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 5 |
| 171 | 177.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 172 | 178.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 174 | 178.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 181 | 178.21 | humidity | 70.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 183 | 178.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 204 | 178.43 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 18 |
| 205 | 178.44 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 211 | 178.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 213 | 178.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 215 | 178.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 217 | 178.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 218 | 178.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 219 | 178.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 220 | 178.58 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 11 |
| 238 | 178.65 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 7 |
| 266 | 179.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 19 |
| 286 | 179.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 288 | 179.19 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 312 | 179.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 316 | 179.35 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 317 | 179.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 324 | 179.40 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 344 | 179.47 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 357 | 179.57 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 370 | 179.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 378 | 179.75 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 380 | 179.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 392 | 179.81 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 6 |
| 396 | 179.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 19 |
| 397 | 179.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 428 | 179.99 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 477 | 180.21 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 526 | 180.38 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 556 | 180.43 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 576 | 180.47 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 577 | 180.47 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 579 | 180.47 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 586 | 180.49 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 590 | 180.50 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 591 | 180.50 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 12 | 15 |
| 596 | 180.51 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 14 | 12 |
| 601 | 180.52 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 20 | 4 |
| 617 | 180.54 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 631 | 180.56 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 659 | 180.57 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 680 | 180.59 | temperature | 15.0 | 14400 | < th | dose dependent | no | NA | NA |
| 686 | 180.59 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 690 | 180.60 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 17 |
| 703 | 180.60 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 705 | 180.61 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 745 | 180.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 755 | 180.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 9 |
| 757 | 180.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 775 | 180.66 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 794 | 180.68 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 6 |
| 795 | 180.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 843 | 180.76 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 844 | 180.76 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 872 | 180.78 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 901 | 180.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 916 | 180.87 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 917 | 180.87 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 930 | 180.87 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 21 |
| 931 | 180.87 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 939 | 180.88 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 950 | 180.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 951 | 180.89 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 957 | 180.90 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 7 |
| 970 | 180.93 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 6 |