BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0196300 Os07g0196300|AK101511
(404 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0196300 Cyclin-like F-box domain containing protein 707 0.0
Os07g0242600 Cyclin-like F-box domain containing protein 189 3e-48
Os07g0195300 Cyclin-like F-box domain containing protein 150 2e-36
Os07g0198000 142 3e-34
Os07g0242400 Cyclin-like F-box domain containing protein 130 2e-30
Os07g0197000 Conserved hypothetical protein 125 5e-29
Os07g0207900 117 1e-26
Os07g0195700 95 9e-20
Os07g0183700 87 3e-17
Os07g0195500 76 5e-14
Os07g0196600 69 8e-12
>Os07g0196300 Cyclin-like F-box domain containing protein
Length = 404
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/404 (88%), Positives = 359/404 (88%)
Query: 1 MAPPGTSXXXXXXXXXXXXXXXXLPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAF 60
MAPPGTS LPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAF
Sbjct: 1 MAPPGTSRRRGRRGRRAAGRCAGLPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAF 60
Query: 61 VDAHASRHPGPYVAACFXXXXXXXXXXXXXXXXXIVDLSSGDIVKTIYTEVSGSRVQRTR 120
VDAHASRHPGPYVAACF IVDLSSGDIVKTIYTEVSGSRVQRTR
Sbjct: 61 VDAHASRHPGPYVAACFSDEADGGDGDESCGGVDIVDLSSGDIVKTIYTEVSGSRVQRTR 120
Query: 121 LDLVCLVEGPSPLDVTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTGE 180
LDLVCLVEGPSPLDVTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTGE
Sbjct: 121 LDLVCLVEGPSPLDVTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTGE 180
Query: 181 YKVVRLLGSGNPCELYECEIMTVNSAGALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLL 240
YKVVRLLGSGNPCELYECEIMTVNSAGALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLL
Sbjct: 181 YKVVRLLGSGNPCELYECEIMTVNSAGALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLL 240
Query: 241 DYSRLYCSNDGLLIRPGNIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEPLSL 300
DYSRLYCSNDGLLIRPGNIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEPLSL
Sbjct: 241 DYSRLYCSNDGLLIRPGNIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEPLSL 300
Query: 301 ADLNGSLVMVHAVYGSPMDLWFLSDLEQGLWVKKYSIDFEXXXXXXXXXXXXDDEKIVFL 360
ADLNGSLVMVHAVYGSPMDLWFLSDLEQGLWVKKYSIDFE DDEKIVFL
Sbjct: 301 ADLNGSLVMVHAVYGSPMDLWFLSDLEQGLWVKKYSIDFEYYNNNAYPLLLLDDEKIVFL 360
Query: 361 LRGTNVLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLSLEGGLN 404
LRGTNVLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLSLEGGLN
Sbjct: 361 LRGTNVLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLSLEGGLN 404
>Os07g0242600 Cyclin-like F-box domain containing protein
Length = 397
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 195/388 (50%), Gaps = 27/388 (6%)
Query: 24 LPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPYVAACFXXXXXX 83
LPL+ LF++++RLPA+++CRLR VCR WR++ SD F+ H + H + A F
Sbjct: 25 LPLEVLFDVLVRLPAKELCRLRIVCRPWRSLTSDPLFMKTHVAHHRETFFLASF------ 78
Query: 84 XXXXXXXXXXXIVDLSSGDIVKTIYTEVSGSRVQRTRLDLVCLVEGPSPLDVTVLDPVTG 143
I+D +G+++K I +G +V TRLDLVC+ + VL+PVTG
Sbjct: 79 ---KDDETHIHIMDF-AGNVIKQIGIP-AGHKVLCTRLDLVCVATNKN--SCHVLNPVTG 131
Query: 144 ATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTGEYKVVRLLGSGNPCEL---YECEI 200
Y KS A+ + R S AFG V STGEYKV+R+ +L CE+
Sbjct: 132 DVYNLPKS-PAEEHTYHVNLRKPFTSFAFGHVASTGEYKVLRMFNRPGFTDLGIPQLCEV 190
Query: 201 MTVNSA-GALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLLD--YSRLYCSNDGLLIRPG 257
+TV G +WR Q + V VV+NGV YFL+D Y + DG I P
Sbjct: 191 ITVKGGTGQARWRGKQSREFFVECQKANSGVVVNGVVYFLIDSVYDSMIIGGDGAGIHPD 250
Query: 258 NIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEPLSLADLNGSLVMV-HAVY-G 315
I FDLE EEW + GP DM + I + LSLA+L G LV+V H Y
Sbjct: 251 FICSFDLEVEEWREDIQGPISRNFVYDMDFPDEYIAIWDQLSLAELKGYLVLVYHQSYRS 310
Query: 316 SPMDLWFLSDLEQGLWVKKYSIDFEXXXXXXXXXXX----XDDEKIVFLLRGTNVLQSYD 371
S +DLW+L D E W+K+YSI E DD +IV L T +L YD
Sbjct: 311 STIDLWYLIDYETRTWIKQYSIQIESFVPVRECKVKPLLVLDDGRIVVWLGSTGLLLIYD 370
Query: 372 LKDDTYTDILVVPDFRSVGIYTGDLLSL 399
+ T+ ++ + VG+YTG +LSL
Sbjct: 371 PRTSTFAEV-EMRRLSEVGLYTGSVLSL 397
>Os07g0195300 Cyclin-like F-box domain containing protein
Length = 432
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 171/333 (51%), Gaps = 26/333 (7%)
Query: 24 LPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPYVAACFXXXXXX 83
LP D LFE++LRL +DVCRLR VCRSWRA+ +D FV AHA+RH GP +A
Sbjct: 33 LPADVLFEVLLRLGPKDVCRLRGVCRSWRALTTDATFVAAHAARHRGPLLAG-----GVL 87
Query: 84 XXXXXXXXXXXIVDLSSGDIVKTIYTEVSGSRVQRTRLDLVCLVEGPSPLDVTVLDPVTG 143
++DL SG +VK I + + T LDL+C+ E + T+L+P+TG
Sbjct: 88 DFDVFPSVDVLLMDL-SGSVVKRIRHAATHLVLPTTNLDLLCVTEVYT-CRATLLNPITG 145
Query: 144 ATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTGEYKVVRLLGSGN----PCELYECE 199
A + +S + S S +G+ S G+YKV+R+L + P +L+E
Sbjct: 146 AAVHLPEPLSTPHSLRGRSLSDFDGSFKYGR-DSNGDYKVLRVLTDCHNKQFPEQLFEIL 204
Query: 200 IMTVNSAGALQWRAIQGPQLPVC-SSNNMRSVVINGVAYFLLDYSRLYCSNDGL-LIRPG 257
+ +S ++WRA + LP+C + + VVINGV YFLLD N
Sbjct: 205 SLDESSRYHMRWRAKKA--LPMCVRRDAIGGVVINGVVYFLLDGRPNGVKNAHRESYEMD 262
Query: 258 NIVPFDLETEEWMGILNGP---KPVARGRDMIVISS-TLEIMEPLSLADLNGSLVMVH-- 311
++ FDL +E W+ L GP P D I+ + + + LSL++L+G+LV+
Sbjct: 263 HMALFDLCSERWISYLEGPMATHPEMNNIDEILPEPLEMSVYQNLSLSELSGALVVAQYT 322
Query: 312 ----AVYGSPMDLWFLSDLEQGLWVKKYSIDFE 340
A S +DLW+L D E+ +W KKY I E
Sbjct: 323 DYRSAEIKSYVDLWYLMDSEKQIWEKKYRIVLE 355
>Os07g0198000
Length = 420
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 181/397 (45%), Gaps = 40/397 (10%)
Query: 24 LPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPYVAACFXXXXXX 83
+P D + E++LRLPA+ R RAVCR WRA SD FV AHA+R VA
Sbjct: 32 MPEDMVREVLLRLPAKAAARFRAVCRPWRATLSDPRFVAAHAARRGALLVAT-------G 84
Query: 84 XXXXXXXXXXXIVDLS--SGDIVKTIYTEVSGSRVQRTRLDLVCLVEGPSPLDVTVLDPV 141
VDL +GD+V+ E G T DL C+V + VL PV
Sbjct: 85 APCRTSRGSGGHVDLVGLAGDVVRRTRAE-EGVLELSTCGDLACVVG--TDRRARVLHPV 141
Query: 142 TGATY---IPAKSISADNKDLLS---SGRLIMESCAFGKVPSTGEYKVVRLLGSGNPCEL 195
TGA +P ++ +NK R + AFG+ STGEYKV+R+ +
Sbjct: 142 TGAGADDPLP-HDLAEENKPWAGWRLEERFHAFTHAFGRASSTGEYKVLRVASLSPDLRV 200
Query: 196 YE-CEIMTVNSAG----ALQWRAIQGPQLPVCSSNNMRSVVINGVAYFL---LDYSRLYC 247
+ E++ ++ AG +WR + P + ++N V+ GV +FL + L
Sbjct: 201 EQLVEVLALDRAGRAHAGARWRGMPRPPFHLAGASNAGMAVVAGVVHFLAVDIPLPFLPF 260
Query: 248 SNDGLLIRPGNIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEP-LSLADLNGS 306
+D I G I FDL+TE+W +L GP + + I ++ P L+L +L G
Sbjct: 261 EHDDDDIHHGAIARFDLDTEQWRPLLRGPLNIHQ------IQQDNDLSPPLLTLTELKGF 314
Query: 307 LVMVH---AVYGSPMDLWFLSDLEQGLWVKKYSIDFEXXXXXXXXX--XXXDDEKIVFLL 361
LV VH + S MDLWFL D E+ WVK+Y I D+ IVF +
Sbjct: 315 LVTVHRDRSHQSSSMDLWFLIDSEEETWVKEYKIQIHLRPREFYAHPLLVLDERMIVFCV 374
Query: 362 RGTNVLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLS 398
R + YDL+ D L D VG+Y G LLS
Sbjct: 375 RPKGRVMVYDLEIGKCKD-LGDGDCVEVGVYKGCLLS 410
>Os07g0242400 Cyclin-like F-box domain containing protein
Length = 394
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 178/379 (46%), Gaps = 46/379 (12%)
Query: 38 ARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPYVAACFXXXXXXXXXXXXXXXXXIVD 97
A+ +CRLRAVCRSW + +DR F+ A+A+ HP P +A +VD
Sbjct: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAV-------LVDSFPSRCCVDLVD 90
Query: 98 LSSGDIVKTIYTEVSGSRVQRTRLDLVCLVEGPSPLDVTVLDPVTGATYIPAKSISADNK 157
L SG++V+ I RV D V LV G V+VLDP TG+ I+ +
Sbjct: 91 L-SGNVVEEILGVGGECRVLTASYDRV-LVAGEHH-RVSVLDPATGSVSALPFGIA---E 144
Query: 158 DLLSSGRLIMESCAFGKVPSTGEYKVVRLLGSGNPCELYE----CEIMTVNSAGALQWRA 213
D++ + AFG+ STGEYK++R+L + YE CE+ + +WR
Sbjct: 145 DMVRRNGMRPAWFAFGQTNSTGEYKLLRILEDLE--DGYEADPVCEVFAIGDMNG-RWRK 201
Query: 214 IQGPQL---PVCSSNNMRSVVINGVAYFLLDYSRLYCSNDGLLIRPGNIVPFDLETEEWM 270
++ P P C++ VV G AYF LD+ ++ + G I FDL TE+W
Sbjct: 202 MESPPGYLDPSCTN----GVVFEGAAYFFLDHWQM---DPSYYFATGCIPSFDLATEQWS 254
Query: 271 GILNGPKPVARGRDMIVISSTL---EIMEPLSLADLNGSLVMVHAVYG-SPMDLWFLSDL 326
L GP R + + TL ++ + L LA L G+L H S +DLWFL D
Sbjct: 255 TALQGPV----NRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDF 310
Query: 327 EQGLWVKKYSID----FEXXXXXXXXXXXXDDEKIVFLLR--GTNVLQSYDLKDDTYTDI 380
E G+W K+Y I+ F+ D+ +V ++ ++ Y+ +T ++I
Sbjct: 311 ENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEI 370
Query: 381 LVVPD--FRSVGIYTGDLL 397
+ F VG+YTG+ L
Sbjct: 371 VQTKASIFTGVGVYTGNQL 389
>Os07g0197000 Conserved hypothetical protein
Length = 381
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 23/206 (11%)
Query: 132 PLDVTVLDPVTGATYIPAKSISADNKDLLSSGRLIM------ESCAFGKVPSTGEYKVVR 185
PL + VL+P TG T ++ ++ D +++GR +M ES AFG++ STG YK +R
Sbjct: 4 PLCLWVLNPATGVTV----ALPKNHSDEIAAGRGMMMYHGKVESHAFGEISSTGVYKALR 59
Query: 186 LLGSGNPCELYE---CEIMTVNSAGALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLLDY 242
++ Y+ CE++ V+ WR +QGP +C S MR VV++GV YF++++
Sbjct: 60 II------RFYQRQLCEVIAVDGNNQDMWRKMQGPPATICCSKQMRCVVVDGVVYFMMEF 113
Query: 243 SRLYCSNDGLLIRPGNIVPFDLETEEWMGILNGPKPVARG-RDMIVISSTLEIMEPLSLA 301
Y L + PG+I F+LETE+WM + GP+ V R +D S L + LSLA
Sbjct: 114 YTTYFEIVVLPVEPGSIASFNLETEKWMTV-QGPEVVHRHVQDGDSTYSELNLQ--LSLA 170
Query: 302 DLNGSLVMVHAVYGSPMDLWFLSDLE 327
D G LV VH + MDLWFL+D E
Sbjct: 171 DSGGCLVTVHNIPPIRMDLWFLTDSE 196
>Os07g0207900
Length = 403
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 179/410 (43%), Gaps = 75/410 (18%)
Query: 24 LPLDALFEIMLRLPARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPY--VAACFXXXX 81
LP+D L ++LRLPAR CRLRAVCR WRAV SD F AHA+RHP P+ VAAC
Sbjct: 32 LPVDLLNAVLLRLPARPACRLRAVCRPWRAVLSDPRFAAAHAARHPDPHLVVAAC----- 86
Query: 82 XXXXXXXXXXXXXIVDL----SSGDIVKTIYT-EVSGSRVQRTRLDLVCLVEGPSPLDVT 136
+VD+ +SGD+ K + V R + LV L V
Sbjct: 87 ----DRLDAGGIELVDVYLVGASGDVAKRVPAGRCDTDAVSSARDGVALLVGNDRRLRVL 142
Query: 137 VLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAF--GKVP-STGEYKVVRLLGSGNPC 193
+ +P G +C+F G+ S+GE+KV+R +G+
Sbjct: 143 DAAASAAVSLVP-------------DGEHHPINCSFTLGRAASSSGEHKVLR-IGTVVHG 188
Query: 194 ELYECEIMTVNSAGA----LQWRAIQGPQLPVCSSNNMRSVVINGVAYFLLDYSRLYCSN 249
E C ++T+ AG +WR P L V + V GVAYFLL R Y ++
Sbjct: 189 EPQVCAVLTLAVAGGRGQNARWREAPSPPL-VVRTRRGDVAVAGGVAYFLL--RRAYLAD 245
Query: 250 DGLLIRPGNIVPFDLETEEWMGILNGPKPVARGRDMIVISSTLEIMEPLSLADLNGSLVM 309
I FDLE E+W L G P+A R T ++LA+L GSLV+
Sbjct: 246 --------RIAAFDLEAEQWRPALVGGPPLAAWR------PTRPDRPRVTLAELGGSLVV 291
Query: 310 -VHAVYGSPMDLWFL---SDLEQGLWVKKYSID-------FEXXXXXXXXXXXXDDEKIV 358
+ + +DLWFL D EQ W K+Y++ + DD +IV
Sbjct: 292 AIDDHRAATLDLWFLLAAGDGEQ-HWSKQYTVTMPYHRRPWRCDGERAEPVVVLDDGRIV 350
Query: 359 FLLRG---------TNVLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLSL 399
F + V++ YD +TD+ VG+YTG+LLSL
Sbjct: 351 FWVWAGGSGGTRHGGGVMRVYDPITGGHTDVATAARCAHVGVYTGNLLSL 400
>Os07g0195700
Length = 294
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 198 CEIMTVNSA---GALQWRAIQGPQLPVCSSNNMRSVVINGVAYFLLD--YSRLYCSNDGL 252
CE+ TV G WR Q Q V VV+NGV YFL+D Y + S G
Sbjct: 16 CEVFTVKGGTGQGHAHWRGKQSRQFFVEMQKANSGVVVNGVVYFLMDALYDAMIISGLGA 75
Query: 253 LIRPGNIVPFDLETEEWMGILNGPKPVARGRDM-IVISSTLEIMEPLSLADLNGSLVMVH 311
I P I FDLETEEW + GP + D I L LA+L G LV H
Sbjct: 76 GIHPDFIFSFDLETEEWREDIQGPISSSFVFDGDFDPQEYFSIWHQLCLAELKGYLVH-H 134
Query: 312 AVYGSPMDLWFLSDLEQGLWVKKYSIDFEXX----XXXXXXXXXXDDEKIVFLLRGTNVL 367
+ S MDLWFL+D E WVK+YSI E DD +I+ L T +L
Sbjct: 135 QRFCSTMDLWFLTDYETRAWVKEYSIQTESFIPVLEYDVKPLLVLDDGRILIWLGSTGLL 194
Query: 368 QSYDLKDDTYTDILVVPDFRSVGIYTGDLLSLEGG 402
YD + ++ ++ + VG+YTG LLSL+
Sbjct: 195 LIYDPRTSSFAEV-KMRHLAEVGMYTGSLLSLQNA 228
>Os07g0183700
Length = 361
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 115/235 (48%), Gaps = 24/235 (10%)
Query: 180 EYKVVRLLGSGNPCELYECEIMTVNSAGALQWRAIQGP--QLPVCSSNNMRSVVINGVAY 237
E+K++R++ S + + EI+T + QWR P L +N VV G AY
Sbjct: 137 EHKLLRIVESRDYSHV--SEIITTSDTKP-QWRKADNPPDYLDWSFTNG---VVYRGAAY 190
Query: 238 FLLDY-SRLYCSNDGLLIRPGNIVPFDLETEEWMGILNGP-KPVARGRDMIVISSTLEIM 295
FLL Y +R+ S+ LIR G + FDLETE+W L GP K + + V + L
Sbjct: 191 FLLSYFNRVAASS---LIRTGCMPSFDLETEQWSMTLQGPTKTILHDANGTVNYTGLA-- 245
Query: 296 EPLSLADLNGSLVMVHAV-YGSPMDLWFLSDLEQGLWVKKYSIDFEXXXXXXXXXXX--- 351
L LA L G+L H + S +DLWFL+D ++G W K+Y I+ +
Sbjct: 246 GHLMLAQLKGTLSAAHWKDHVSIVDLWFLTDFDKGTWSKEYRINVDFVFFGTGVYVKVHP 305
Query: 352 ---XDDEKIVFLLR-GTN-VLQSYDLKDDTYTDILVVPDFRSVGIYTGDLLSLEG 401
D+ ++VF L+ GT ++Q Y+ DI + VG+YTG L LEG
Sbjct: 306 LVVTDEGEVVFWLQAGTKAIVQIYNPVTKISLDITETSIYAGVGVYTGSPLCLEG 360
>Os07g0195500
Length = 395
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 122 DLVCLVEGPSPLD--VTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTG 179
D++C+V SP D + V+D TG + SA ++GR + GKVP+TG
Sbjct: 88 DMICVV---SPGDGLLRVVDVATGDLTDLSMGCSA------ATGRNVSSGYTLGKVPATG 138
Query: 180 EYKVVRLLGSGNPCELYECEIMTVNSAGALQWRAIQG-PQLPVCSSNNMRSVVINGVAYF 238
E+K++ + + N + E +T + G QWRA + P + + + S + GV +F
Sbjct: 139 EHKLLHVYAAANGSQSSEVLTITTGAGGGCQWRATRSHPPMRIEHGISRSSATVGGVVHF 198
Query: 239 LLDYSRLYCSNDGLLIRPGNIVPFDLETEEWMGIL-NGPKPV-ARGRDMIVISSTLEIME 296
L + + G + I FDL TE+W +L +GP P R R
Sbjct: 199 LSPATTSAPRDRG--VECDTIAGFDLATEQWRPVLMDGPLPADQRHRGQ---------RP 247
Query: 297 PLSLADLNGSLVMVHAVY-GSPMDLWFLSDLEQGLWVKKYSI 337
LSLA L G LV VH Y G ++LW L+ W K +S+
Sbjct: 248 NLSLAALGGRLVAVHHDYPGRTINLWSLTP-NTTTWTKLHSL 288
>Os07g0196600
Length = 400
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 122 DLVCLVEGPSPLD--VTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFGKVPSTG 179
D++C+V SP D + V+D TG + SA ++GR + GKVP+TG
Sbjct: 88 DMICVV---SPGDGLLRVVDVATGDLTDLSMGCSA------ATGRNVSSGYTLGKVPATG 138
Query: 180 EYKVVRLLGSGNPCELYEC-EIMTVNSAGALQWRAIQG-PQLPVCSSNNMRSVVINGVAY 237
E+K++ + + N + E I T G QWRA + P + + + S + GV +
Sbjct: 139 EHKLLHVYAAANGSQSSEVLTITTGGGGGGCQWRATRSHPPMRIEHGISRSSATVGGVVH 198
Query: 238 FLLDYSRLYCSNDGLLIRPGNIVPFDLETEEWM-GILNGPKPV-ARGRDMIVISSTLEIM 295
FL + + G + I FDL TE+W +++GP P R R
Sbjct: 199 FLSPATTSAPRDRG--VECDTIAAFDLATEQWRPALMDGPLPADQRHRGQ---------R 247
Query: 296 EPLSLADLNGSLVMVHAVY-GSPMDLWFLSDLEQGLWVKKYSI 337
L LA L+G LV VH Y G ++LW L+ + W K +S+
Sbjct: 248 PNLGLAALDGRLVAVHHDYPGRTINLWSLTPNDT-TWTKLHSL 289
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,836,656
Number of extensions: 497619
Number of successful extensions: 1360
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1331
Number of HSP's successfully gapped: 12
Length of query: 404
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 301
Effective length of database: 11,657,759
Effective search space: 3508985459
Effective search space used: 3508985459
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)