BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0730900 Os06g0730900|AK064963
(542 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0730900 Peptidase A22B, minor histocompatibility antig... 1010 0.0
Os02g0823000 Peptidase A22B, minor histocompatibility antig... 851 0.0
Os11g0433200 Similar to Growth-on protein GRO10 401 e-112
Os01g0914700 Peptidase A22B, minor histocompatibility antig... 368 e-102
Os10g0393100 Peptidase A22B, minor histocompatibility antig... 137 2e-32
Os02g0117400 Peptidase A22B, minor histocompatibility antig... 98 1e-20
Os05g0436400 Peptidase A22, presenilin signal peptide famil... 98 2e-20
>Os06g0730900 Peptidase A22B, minor histocompatibility antigen H13 family protein
Length = 542
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/518 (95%), Positives = 495/518 (95%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM
Sbjct: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
LADPIDCCTSPKEKVSGDILLVQR NHVHELYKMVCEK
Sbjct: 85 LADPIDCCTSPKEKVSGDILLVQRGKCKFTKKAKFAEAAGASGIIIINHVHELYKMVCEK 144
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL
Sbjct: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM
Sbjct: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV
Sbjct: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
Query: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF
Sbjct: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
Query: 385 WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA 444
WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA
Sbjct: 385 WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA 444
Query: 445 FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS
Sbjct: 445 FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
Query: 505 LGWKRGELWNLWSKGEPERVCPHHMHMQPQPKTPPLVQ 542
LGWKRGELWNLWSKGEPERVCPHHMHMQPQPKTPPLVQ
Sbjct: 505 LGWKRGELWNLWSKGEPERVCPHHMHMQPQPKTPPLVQ 542
>Os02g0823000 Peptidase A22B, minor histocompatibility antigen H13 family protein
Length = 545
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/512 (80%), Positives = 450/512 (87%), Gaps = 2/512 (0%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
DIVH DDEAPKIPGCSNDF+LVKVQ+WVN +ED E+VGVGARFGP I SKEKHANRT L+
Sbjct: 27 DIVHQDDEAPKIPGCSNDFVLVKVQTWVNNREDGEFVGVGARFGPTIESKEKHANRTGLL 86
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
LADPIDCC P +KV+GD+LLVQR NHVHELYKMVC++
Sbjct: 87 LADPIDCCDPPTQKVAGDVLLVQRGNCKFTKKAKNAEAAGASAIIIINHVHELYKMVCDR 146
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
NETDLDINIPAVLLP+DAG L +LT G VSVQ YSPDRP+VDTAEVFLWLMAVGT+L
Sbjct: 147 NETDLDINIPAVLLPKDAGNDLQKLLTRGK-VSVQLYSPDRPLVDTAEVFLWLMAVGTIL 205
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
CASYWSAWSAREA+ EQEKLLKDG E LN+E G SSGM+DIN+ SAI+FVV+ASCFLIM
Sbjct: 206 CASYWSAWSAREAVIEQEKLLKDGHESSLNLEAGGSSGMVDINMTSAILFVVIASCFLIM 265
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
LYK+MS WFVELLVVIFC+GGVEGLQTCLVALLSRWF+ A+ESF KVPFFGAVSYLT+AV
Sbjct: 266 LYKLMSHWFVELLVVIFCIGGVEGLQTCLVALLSRWFKPAAESFVKVPFFGAVSYLTIAV 325
Query: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
PFCIVFAV+WAV+R TYAWIGQDILGIALI+TVIQIVR+PNLKVGSVLLSC+F YDIF
Sbjct: 326 CPFCIVFAVIWAVYRRMTYAWIGQDILGIALIVTVIQIVRIPNLKVGSVLLSCSFLYDIF 385
Query: 385 WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA 444
WVF+SK WFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGG+SIIGFGDILLPGLL+A
Sbjct: 386 WVFISKMWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGFSIIGFGDILLPGLLIA 445
Query: 445 FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
FALRYDWAAKK+LQ+GYFLWSMVAYGSGL+ITYVALNLMDGHGQPALLYIVPFTLG I+
Sbjct: 446 FALRYDWAAKKTLQSGYFLWSMVAYGSGLMITYVALNLMDGHGQPALLYIVPFTLGTFIA 505
Query: 505 LGWKRGELWNLWSKGEPERVCPHHMHMQPQPK 536
LG KRGEL NLW++G+PERVC HMHMQP PK
Sbjct: 506 LGRKRGELRNLWTRGQPERVCT-HMHMQPSPK 536
>Os11g0433200 Similar to Growth-on protein GRO10
Length = 361
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 259/353 (73%), Gaps = 5/353 (1%)
Query: 172 SGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVLCASYWSAWSAREALCEQEKLL--KDGR 229
S +V VQ YSP+RPVVD + FLW+MA+GT++CAS W+ + A E + E+ L KDG
Sbjct: 4 SFAAVEVQLYSPNRPVVDLSACFLWIMAIGTIVCASLWTEFVACEQVDERYNQLTRKDGP 63
Query: 230 EVLLNVENGSSSGMIDINVASAIMFVVVASCFLIMLYKMMSSWFVELLVVIFCVGGVEGL 289
N + +I+ AI+F++VAS FL++L+ MSSWFV LL+V+FC+GG+EG+
Sbjct: 64 NS--GTTNREDKEIFEISAKGAIVFILVASVFLLLLFYFMSSWFVWLLIVLFCIGGIEGM 121
Query: 290 QTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAVSPFCIVFAVLWAVHRHFTYAWIGQD 349
CLV LL+R + + ++PFFG V L++ + PFC +FA+LWAV+RH ++AWIGQD
Sbjct: 122 HVCLVTLLTRICKDCGQKTVQLPFFGEVLTLSVLIVPFCTIFAILWAVYRHASFAWIGQD 181
Query: 350 ILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVFVSKRWFHESVMIVVARGDKTDE 409
ILGI L+ITV+Q+ R+PN++V S LLS AF YD+FWVF+S FHESVMI VARGD + E
Sbjct: 182 ILGICLMITVLQMARLPNIRVASALLSAAFVYDVFWVFISPLIFHESVMIAVARGDNSGE 241
Query: 410 DGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFALRYDWAAKKSLQTGYFLWSMVAY 469
+PMLL+IPR FDPWGGY +IGFGDI+ PGLLVAF+ R+D A+K+ L GYFLW V Y
Sbjct: 242 -AIPMLLRIPRFFDPWGGYDMIGFGDIIFPGLLVAFSYRFDRASKRGLFNGYFLWLTVGY 300
Query: 470 GSGLLITYVALNLMDGHGQPALLYIVPFTLGALISLGWKRGELWNLWSKGEPE 522
GL +TY+AL LMDGHGQPALLY+VP TLG ++ LGW RGEL +LW+ G +
Sbjct: 301 AVGLFLTYLALFLMDGHGQPALLYLVPCTLGLIVILGWFRGELHDLWNYGRSQ 353
>Os01g0914700 Peptidase A22B, minor histocompatibility antigen H13 family protein
Length = 523
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 284/494 (57%), Gaps = 13/494 (2%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
D D +PK PGC N F VKV WV+G E G+ ARFG + + ++ + +
Sbjct: 39 DSEFEDGVSPKFPGCDNPFQKVKVTYWVDGDERSSLTGITARFGEVLPATGSDGDKRKAV 98
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
+ P C ++ I + +R N +L KMVC +
Sbjct: 99 VPAPKTGCAKSSAPLASSIAVAERGECTFLEKAKTAESGGAAALLLINDEDDLQKMVCTQ 158
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
N+T +I IP V++ + AG + + + G V + Y+P++P D A FLWLMAVG+V
Sbjct: 159 NDTVPNIGIPVVMVSQSAGRKILSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAVGSVA 218
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
CAS WS + +D L E + S ++++ +A++F+V AS L+
Sbjct: 219 CASVWSFVVVGD---------EDKNAPTLGGEEAADSEIVELQTKTALVFIVTASLVLLF 269
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
L+ S+W LLVV+FC+ G++GL L+ R E+ +P G V+ +TL +
Sbjct: 270 LFFFKSTWSAWLLVVLFCLSGLQGLHYVASTLIVRTCDRCREAKVALPVLGNVTVVTLVI 329
Query: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
P ++F V+WAVH++ +AW+GQD++GI ++I V+Q+V +PN+KV + LL AF YDIF
Sbjct: 330 LPLALIFVVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFMYDIF 389
Query: 385 WVFVSKRWFHESVMIVVARGDKTDED-GVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLV 443
WVF+S F +SVMI VARG +DE +PM+LK+P+ FD W GY +IGFGDIL PGLLV
Sbjct: 390 WVFISPFIFKKSVMITVARG--SDEGPSLPMVLKMPKEFDTWNGYDMIGFGDILFPGLLV 447
Query: 444 AFALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALI 503
AF+ RYD A K L GYFL M+ Y GL TYV L LM GQPALLY+VP TLG ++
Sbjct: 448 AFSFRYDRANGKDLTDGYFLCLMIGYAFGLSCTYVGLYLMK-SGQPALLYLVPSTLGTIV 506
Query: 504 SLGWKRGELWNLWS 517
+LG KRGEL LW+
Sbjct: 507 TLGAKRGELSQLWN 520
>Os10g0393100 Peptidase A22B, minor histocompatibility antigen H13 family protein
Length = 371
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 48/344 (13%)
Query: 217 ALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIMLYKMMSSWFVEL 276
A + L GRE+ N++ +S I ++ + A+M + +SC L++++ + SS V
Sbjct: 26 AYASASRALDHGREMERNLDFSEAS--ITLDRSQALMIPLASSCSLLLMFYLFSS--VSH 81
Query: 277 LVVIF-CVGGVEGLQTCLVALLS--RWFRAASESFFKVPFFGAVSYLTLAVSPFCIVFAV 333
LV F V L CL ++ R + F + L + C+ V
Sbjct: 82 LVTAFTAVASAMALFFCLSPYVNCVRSRLGVGDPFVSRCCSKPFTRLQGLLVAICVGTVV 141
Query: 334 LWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVFVSKRWF 393
W V H W+ ++LGI++ I + VR+PN+K+ ++LL C F YD+FWVF S+R+F
Sbjct: 142 AWLVSGH----WLLNNLLGISICIAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFF 197
Query: 394 HESVMIVVARGDK-------------------TDEDGVPMLLKIPRMF-------DPWGG 427
+VM+ VA T + +P+ L PR G
Sbjct: 198 GANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSPGD 257
Query: 428 YSIIGFGDILLPGLLVAFALRYDWAAKK----------SLQTGYFLWSMVAYGSGLLITY 477
Y ++G GD+ +PG+L+A L +D K S Q Y +++ YG G L+T
Sbjct: 258 YMMLGLGDMAIPGMLLALVLSFDHRKIKDMSVSQDMPPSKQRKYVWYALTGYGVG-LVTA 316
Query: 478 VALNLMDGHGQPALLYIVPFTLGALISLGWKRGELWNLWSKGEP 521
+A ++ QPALLY+VP TLG ++ + W R ELW LW P
Sbjct: 317 LAAGILSQSPQPALLYLVPSTLGPVMYMSWLRNELWELWEGSRP 360
>Os02g0117400 Peptidase A22B, minor histocompatibility antigen H13 family protein
Length = 343
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 19/170 (11%)
Query: 331 FAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVFVSK 390
F + +A +H W+ ++LGI+ I I+++ + + K G++LL+ FFYDIFWVF +
Sbjct: 151 FCIWYAAKKH----WLANNVLGISFCIQGIEMLSLGSFKTGAILLAGLFFYDIFWVFFT- 205
Query: 391 RWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFALRYD 450
VM+ VA+ P+ L P D +S++G GDI++PG+ VA ALR+D
Sbjct: 206 -----PVMVSVAKSFDA-----PIKLLFPTG-DAARPFSMLGLGDIVIPGIFVALALRFD 254
Query: 451 WAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLG 500
+ ++ YF + + Y GL +T + +N QPALLYIVP +G
Sbjct: 255 --VSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQA-AQPALLYIVPGVIG 301
>Os05g0436400 Peptidase A22, presenilin signal peptide family protein
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 19/170 (11%)
Query: 331 FAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVFVSK 390
F + +A +H W+ ++LGI+ I I+++ + + K G++LLS FFYDIFWVF +
Sbjct: 91 FCIWYAAKKH----WLANNVLGISFCIQGIEMLSLGSFKTGAILLSGLFFYDIFWVFFT- 145
Query: 391 RWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFALRYD 450
VM+ VA+ P+ L P D +S++G GDI++PG+ VA ALR+D
Sbjct: 146 -----PVMVSVAKSFDA-----PIKLLFPTG-DAARPFSMLGLGDIVIPGIFVALALRFD 194
Query: 451 WAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLG 500
+ ++ YF + + Y GL +T + +N QPALLYIVP +G
Sbjct: 195 --VSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQA-AQPALLYIVPGVIG 241
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.140 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,936,975
Number of extensions: 720404
Number of successful extensions: 1774
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1757
Number of HSP's successfully gapped: 7
Length of query: 542
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 436
Effective length of database: 11,501,117
Effective search space: 5014487012
Effective search space used: 5014487012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)