Os06g0730900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
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Os06g0730900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.33 | 0.165 | 9.76 | -0.246 | 0.318 | 0.93 | 0.153 | -0.821 | -0.118 | 4.38 | 10.18 | 996 | -- | -- |
| 12.91 | 0.167 | 9.74 | -0.087 | 0.347 | 0.953 | 0.0651 | -- | -0.0809 | 4.64 | 7.369 | 940 | -- | -- |
| 12.37 | 0.164 | 9.76 | -0.253 | 0.301 | 0.919 | -- | -0.806 | -0.12 | 4.04 | 10.77 | 1077 | -- | -- |
| 12.89 | 0.167 | 9.74 | -0.0852 | 0.292 | 0.897 | -- | -- | -0.0776 | 3.83 | 8.963 | 1119 | -- | -- |
| 16.95 | 0.192 | 9.77 | -0.262 | -- | 1 | -- | -0.756 | -0.13 | -- | 9.761 | 1138 | -- | -- |
| 25.42 | 0.236 | 9.71 | 0.18 | 0.385 | -- | 0.0777 | -- | 0.0777 | 2.85 | -- | -- | -- | -- |
| 25.44 | 0.236 | 9.71 | 0.178 | 0.385 | -- | -- | -- | 0.0773 | 2.85 | -- | -- | -- | -- |
| 17.42 | 0.194 | 9.75 | -0.103 | -- | 0.993 | -- | -- | -0.0875 | -- | -9.038 | 1142 | -- | -- |
| 13.05 | 0.168 | 9.74 | -- | 0.299 | 0.871 | -- | -- | -0.0626 | 3.98 | 8.277 | 1080 | -- | -- |
| 34.01 | 0.272 | 9.71 | 0.194 | -- | -- | -- | -- | 0.0872 | -- | -- | -- | -- | -- |
| 26.27 | 0.24 | 9.72 | -- | 0.389 | -- | -- | -- | 0.0574 | 2.86 | -- | -- | -- | -- |
| 17.66 | 0.196 | 9.74 | -- | -- | 0.951 | -- | -- | -0.0699 | -- | 7.648 | 1138 | -- | -- |
| 35.01 | 0.276 | 9.71 | -- | -- | -- | -- | -- | 0.0656 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 10 | 11.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 15 | 11.70 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 40 | 11.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 18 |
| 64 | 12.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 69 | 12.13 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 144 | 12.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 12 |
| 204 | 12.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 355 | 12.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 397 | 12.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 415 | 12.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 436 | 12.63 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 472 | 12.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 655 | 12.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 658 | 12.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 733 | 12.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 962 | 12.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 12 | 1 |