BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0730900 Os06g0730900|AK064963
(542 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541 740 0.0
AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541 715 0.0
AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537 426 e-119
AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541 423 e-118
AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373 115 9e-26
AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345 101 9e-22
>AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541
Length = 540
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/508 (69%), Positives = 420/508 (82%), Gaps = 1/508 (0%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
DIVH D+ APK PGC NDF+LVKVQ+W++G E++E+VGVGARFG +IVSKEK+AN+T L+
Sbjct: 29 DIVHQDNLAPKKPGCENDFVLVKVQTWIDGVENEEFVGVGARFGKRIVSKEKNANQTHLV 88
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
A+P D CT K K+SGD+++V+R N+ ELYKMVCE
Sbjct: 89 FANPRDSCTPLKNKLSGDVVIVERGNCRFTAKANNAEAAGASALLIINNQKELYKMVCEP 148
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
+ETDLDI IPAV+LP+DAG +L +L + + VS Q YSP RP VD AEVFLWLMA+GT+L
Sbjct: 149 DETDLDIQIPAVMLPQDAGASLQKMLANSSKVSAQLYSPRRPAVDVAEVFLWLMAIGTIL 208
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
CASYWSAWSAREA E +KLLKD + + N +G S G+++IN SAI FVV+AS FL++
Sbjct: 209 CASYWSAWSAREAAIEHDKLLKDAIDEIPNTNDGGS-GVVEINSISAIFFVVLASGFLVI 267
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
LYK+MS WFVELLVV+FC+GGVEGLQTCLVALLSRWF+ A++++ KVPF G +SYLTLAV
Sbjct: 268 LYKLMSYWFVELLVVVFCIGGVEGLQTCLVALLSRWFQRAADTYVKVPFLGPISYLTLAV 327
Query: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
SPFCIVFAVLWAV+R ++AWIGQD+LGIALIITV+QIV VPNLKVG+VLLSCAF YDIF
Sbjct: 328 SPFCIVFAVLWAVYRVHSFAWIGQDVLGIALIITVLQIVHVPNLKVGTVLLSCAFLYDIF 387
Query: 385 WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA 444
WVFVSK+ FHESVMIVV RGDK+ EDG+PMLLKIPRMFDPWGGYSIIGFGDILLPGLL+A
Sbjct: 388 WVFVSKKLFHESVMIVVTRGDKSGEDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIA 447
Query: 445 FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
FALRYDW A K+L+TGYF+W+MVAYG GLLITYVALNLMDGHGQPALLYIVPFTLG +++
Sbjct: 448 FALRYDWLANKTLRTGYFIWAMVAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTMLT 507
Query: 505 LGWKRGELWNLWSKGEPERVCPHHMHMQ 532
L KR +LW LW+KGEPER CPHH+ ++
Sbjct: 508 LARKRDDLWILWTKGEPERACPHHVRLE 535
>AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541
Length = 540
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/512 (67%), Positives = 404/512 (78%), Gaps = 3/512 (0%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
DIVHHDD P+ PGC+N+F+LVKV + VNG E EYVGVGARFGP + SKEKHA +L
Sbjct: 28 DIVHHDDSLPQRPGCNNNFVLVKVPTRVNGSEYTEYVGVGARFGPTLESKEKHATLIKLA 87
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
+ADP DCC++PK K++G+++LV R N+ +L+KMVCEK
Sbjct: 88 IADPPDCCSTPKNKLTGEVILVHRGKCSFTTKTKVAEAAGASAILIINNSTDLFKMVCEK 147
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
E LDI IP V+LP DAG +L ++ S V++Q YSP RP VD AEVFLWLMAVGT+L
Sbjct: 148 GENVLDITIPVVMLPVDAGRSLENIVKSNAIVTLQLYSPKRPAVDVAEVFLWLMAVGTIL 207
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
CASYWSAW+ RE EQ+KLLKDG + LL + SS G++++ V SAI+FVVVASCFLIM
Sbjct: 208 CASYWSAWTVREEAIEQDKLLKDGSDELLQLSTTSSRGVVEVTVISAILFVVVASCFLIM 267
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLS--RWFRAASESFFKVPFFGAVSYLTL 322
LYK+MS WF+E+LVV+FC+GGVEGLQTCLV+LLS RWFR ES+ KVPF GAVSYLTL
Sbjct: 268 LYKLMSFWFIEVLVVLFCIGGVEGLQTCLVSLLSCFRWFRRFGESYVKVPFLGAVSYLTL 327
Query: 323 AVSPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYD 382
A+ PFCI FAV WAV R ++YAWIGQDILGI+LIITV+QIVRVPNLKVG VLLSCAF YD
Sbjct: 328 AICPFCIAFAVFWAVKRQYSYAWIGQDILGISLIITVLQIVRVPNLKVGFVLLSCAFMYD 387
Query: 383 IFWVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLL 442
IFWVFVSK WF ESVMIVVARGD++ EDG+PMLLKIPRMFDPWGGYSIIGFGDI+LPGLL
Sbjct: 388 IFWVFVSKWWFRESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILPGLL 447
Query: 443 VAFALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGAL 502
V FALRYDW A K L++GYFL +M AYG GLLITY+ALNLMDGHGQPALLYIVPF LG L
Sbjct: 448 VTFALRYDWLANKRLKSGYFLGTMSAYGLGLLITYIALNLMDGHGQPALLYIVPFILGTL 507
Query: 503 ISLGWKRGELWNLWSKGEPERVCPHHMHMQPQ 534
LG KRG+L LW+ GEP+R CP H+ +QPQ
Sbjct: 508 FVLGHKRGDLKTLWTTGEPDRPCP-HVRLQPQ 538
>AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537
Length = 536
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 308/509 (60%), Gaps = 4/509 (0%)
Query: 29 HDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLMLADP 88
D APKIPGCSN+F +VKV++WVNG+ + + + A+FG + S + A + + L P
Sbjct: 30 KDVTAPKIPGCSNEFQMVKVENWVNGENGETFTAMTAQFGTMLPSDKDKAVKLPVALTTP 89
Query: 89 IDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEKNETD 148
+D C++ K+S I L R N EL +MVC + +T
Sbjct: 90 LDSCSNLTSKLSWSIALSVRGECAFTVKAQVAQAGGAAALVLINDKEELDEMVCGEKDTS 149
Query: 149 LDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVLCASY 208
L+++IP +++ +G AL + V + Y+P P+VD A VFLWLM+VGTV AS
Sbjct: 150 LNVSIPILMITTSSGDALKKSIMQNKKVELLLYAPKSPIVDYAVVFLWLMSVGTVFVASV 209
Query: 209 WSAWSAREALCEQEKLLKDGREVLLN-VENGSSSGMIDINVASAIMFVVVASCFLIMLYK 267
WS ++ + EQ L + ++ + G+ +DI+ A++FV+ AS FL++L+
Sbjct: 210 WSHVTSPKKNDEQYDELSPKKSSNVDATKGGAEEETLDISAMGAVIFVISASTFLVLLFF 269
Query: 268 MMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAVSPF 327
MSSWF+ +L + F +GG++G+ V L++R + K+P G S L+L V F
Sbjct: 270 FMSSWFILILTIFFVIGGMQGMHNINVTLITRRCSKCGQKNLKLPLLGNTSILSLVVLLF 329
Query: 328 CIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVF 387
C V A+LW ++R ++AW GQDI GI ++I V+Q+ R+PN++V ++LL CAFFYDIFWVF
Sbjct: 330 CFVVAILWFMNRKTSHAWAGQDIFGICMMINVLQVARLPNIRVATILLCCAFFYDIFWVF 389
Query: 388 VSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFAL 447
+S F +SVMI VARG K + +PMLL+IPR+ DPWGGY++IGFGDIL PGLL+ F
Sbjct: 390 ISPLIFKQSVMIAVARGSKDTGESIPMLLRIPRLSDPWGGYNMIGFGDILFPGLLICFIF 449
Query: 448 RYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALISLGW 507
R+D K + GYF W M YG GL +TY+ L +M+GHGQPALLY+VP TLG + LG
Sbjct: 450 RFDKENNKGVSNGYFPWLMFGYGLGLFLTYLGLYVMNGHGQPALLYLVPCTLGITVILGL 509
Query: 508 KRGELWNLWSKGEPERVCPHHMHMQPQPK 536
R EL +LW+ G + P + P P+
Sbjct: 510 VRKELRDLWNYGTQQ---PSAADVNPSPE 535
>AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541
Length = 540
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 310/511 (60%), Gaps = 2/511 (0%)
Query: 25 DIVHHDDEAPKIPGCSNDFILVKVQSWVNGKEDDEYVGVGARFGPQIVSKEKHANRTRLM 84
D+ +D + + PGC+N F +VKV +WV+G E D G+ A+FG + S A R
Sbjct: 30 DVSWTEDSSLESPGCTNKFQMVKVLNWVDGVEGDFLTGLTAQFGAALPSVPDQALRFPAA 89
Query: 85 LADPIDCCTSPKEKVSGDILLVQRXXXXXXXXXXXXXXXXXXXXXXXNHVHELYKMVCEK 144
DP+D C+ ++ G I L R N +L +M C +
Sbjct: 90 FVDPLDSCSHLSSRLDGHIALSIRGNCAFTEKAKHAEAAGASALLVINDKEDLDEMGCME 149
Query: 145 NETDLDINIPAVLLPRDAGFALHTVLTSGNSVSVQQYSPDRPVVDTAEVFLWLMAVGTVL 204
+T L+++IP +++ + +G AL+ + +V + Y+P RP VD L LMAVGTV+
Sbjct: 150 KDTSLNVSIPVLMISKSSGDALNKSMVDNKNVELLLYAPKRPAVDLTAGLLLLMAVGTVV 209
Query: 205 CASYWSAWSAREALCEQEKLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIM 264
AS WS + + E +L ++ ++DI+V A+ F+V AS FL++
Sbjct: 210 VASLWSELTDPDQANESYSILAKDVSSAGTRKDDPEKEILDISVTGAVFFIVTASIFLLL 269
Query: 265 LYKMMSSWFVELLVVIFCVGGVEGLQTCLVALLSRWFRAASESFFKVPFFGAVSYLTLAV 324
L+ MSSWFV +L + FC+GG++G+ ++A++ R R + K+P G +S L+L V
Sbjct: 270 LFYFMSSWFVWVLTIFFCIGGMQGMHNIIMAVILRKCRHLARKSVKLPLLGTMSVLSLLV 329
Query: 325 SPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIF 384
+ C+ FAV W + RH +Y+W+GQDILGI L+IT +Q+VR+PN+KV +VLL CAF YDIF
Sbjct: 330 NIVCLAFAVFWFIKRHTSYSWVGQDILGICLMITALQVVRLPNIKVATVLLCCAFVYDIF 389
Query: 385 WVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVA 444
WVF+S FHESVMIVVA+GD + + +PMLL+IPR FDPWGGY +IGFGDIL PGLL++
Sbjct: 390 WVFISPLIFHESVMIVVAQGDSSTGESIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLIS 449
Query: 445 FALRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
FA RYD K+ + GYFLW + YG GLL+TY+ L LMDGHGQPALLYIVP TLG +
Sbjct: 450 FASRYDKIKKRVISNGYFLWLTIGYGIGLLLTYLGLYLMDGHGQPALLYIVPCTLGLAVI 509
Query: 505 LGWKRGELWNLWSKGEPERVCPHHMHMQPQP 535
LG RGEL LW+ G E H P P
Sbjct: 510 LGLVRGELKELWNYGIEES--ESHTPEDPMP 538
>AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373
Length = 372
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 68/343 (19%)
Query: 223 KLLKDGREVLLNVENGSSSGMIDINVASAIMFVVVASCFLIMLYKMMSSWFVELLVVIFC 282
+ L G+E+ N + +S I ++ + A+M V++SC L++++ + SS +LL
Sbjct: 32 RALNYGKEMERNRDFSEAS--ITLDSSQALMIPVMSSCSLLLMFYLFSS-VSQLLTAFTA 88
Query: 283 VGGVEGLQTCLVAL---------LSRWF--RAASESFFKVPFFGAVSYLTLAVSPFCIVF 331
+ V L L LS F R S+SF ++ V+ C +
Sbjct: 89 IASVSSLFYWLSPYAVYMKTQLGLSDPFLSRCCSKSFTRIQGLLLVA---------CAMT 139
Query: 332 AVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWVFVSKR 391
V W + H W+ ++LGI++ I + VR+PN+K+ ++LL C F YDIFWVF S+R
Sbjct: 140 VVAWLISGH----WVLNNLLGISICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSER 195
Query: 392 WFHESVMIVVARGDK-------------------TDEDGVPMLLKIPRMFDPWGG----- 427
+F +VM+ VA T + +P+ + PR + GG
Sbjct: 196 FFGANVMVAVATQQASNPVHTVANSLNLPGLQLITKKLELPVKIVFPR--NLLGGVVPGV 253
Query: 428 ----YSIIGFGDILLPGLLVAFALRYD----------WAAKKSLQTGYFLWSMVAYGSGL 473
+ ++G GD+ +P +L+A L +D + K S Y +++ Y G
Sbjct: 254 SASDFMMLGLGDMAIPAMLLALVLCFDHRKTRDVVNIFDLKSSKGHKYIWYALPGYAIG- 312
Query: 474 LITYVALNLMDGHGQPALLYIVPFTLGALISLGWKRGELWNLW 516
L+ +A ++ QPALLY+VP TLG +I + W+R +L LW
Sbjct: 313 LVAALAAGVLTHSPQPALLYLVPSTLGPVIFMSWRRKDLAELW 355
>AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345
Length = 344
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 23/178 (12%)
Query: 327 FCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLSCAFFYDIFWV 386
FC +A W H W+ +ILG++ I I+++ + + K G++LL+ FFYDIFWV
Sbjct: 151 FCAWYA--WKKH------WLANNILGLSFCIQGIEMLSLGSFKTGAILLAGLFFYDIFWV 202
Query: 387 FVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMFDPWGGYSIIGFGDILLPGLLVAFA 446
F + VM+ VA+ P+ L P D YS++G GDI++PG+ VA A
Sbjct: 203 FFTP------VMVSVAKSFDA-----PIKLLFPTG-DALRPYSMLGLGDIVIPGIFVALA 250
Query: 447 LRYDWAAKKSLQTGYFLWSMVAYGSGLLITYVALNLMDGHGQPALLYIVPFTLGALIS 504
LR+D + ++ Q YF + + Y G+++T V +N QPALLYIVP +G L S
Sbjct: 251 LRFDVSRRR--QPQYFTSAFIGYAVGVILTIVVMNWFQA-AQPALLYIVPAVIGFLAS 305
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.140 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,474,977
Number of extensions: 461613
Number of successful extensions: 1209
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1198
Number of HSP's successfully gapped: 7
Length of query: 542
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 439
Effective length of database: 8,282,721
Effective search space: 3636114519
Effective search space used: 3636114519
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)