Os05g0436400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A22, presenilin signal peptide family protein.
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Os05g0436400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A22, presenilin signal peptide family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.94 | 0.193 | 11 | 0.0513 | 0.153 | -0.347 | -0.11 | -0.508 | 0.205 | 8.32 | 22.79 | 70 | -- | -- |
| 17.11 | 0.193 | 11 | 0.134 | 0.154 | -0.398 | -0.128 | -- | 0.23 | 8.67 | 22.89 | 62 | -- | -- |
| 16.98 | 0.192 | 11 | 0.051 | 0.154 | -0.355 | -- | -0.51 | 0.206 | 8.42 | 22.8 | 66 | -- | -- |
| 17.16 | 0.193 | 11 | 0.132 | 0.155 | -0.398 | -- | -- | 0.231 | 8.67 | 22.82 | 62 | -- | -- |
| 18.03 | 0.198 | 11 | 0.0437 | -- | -0.369 | -- | -0.577 | 0.211 | -- | 23.1 | 182 | -- | -- |
| 19.78 | 0.209 | 11 | 0.0505 | 0.239 | -- | 0.0475 | -- | 0.171 | 5.87 | -- | -- | -- | -- |
| 19.79 | 0.208 | 11 | 0.0509 | 0.239 | -- | -- | -- | 0.17 | 5.9 | -- | -- | -- | -- |
| 18.23 | 0.199 | 11 | 0.131 | -- | -0.401 | -- | -- | 0.227 | -- | 23.27 | 254 | -- | -- |
| 17.58 | 0.195 | 11 | -- | 0.157 | -0.36 | -- | -- | 0.21 | 8.26 | 22.98 | 61 | -- | -- |
| 22.74 | 0.223 | 11 | 0.0581 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 19.86 | 0.208 | 11 | -- | 0.24 | -- | -- | -- | 0.165 | 5.89 | -- | -- | -- | -- |
| 18.67 | 0.201 | 11 | -- | -- | -0.381 | -- | -- | 0.208 | -- | 23.51 | 254 | -- | -- |
| 22.83 | 0.223 | 11 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 54 | 16.83 | humidity | 50 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 56 | 16.85 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 59 | 16.89 | radiation | 1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 60 | 16.89 | humidity | 50 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 65 | 16.91 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 67 | 16.92 | radiation | 40 | 270 | < th | dose independent | rect. | 3 | 12 |
| 74 | 16.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 87 | 16.98 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 112 | 17.05 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 19 |
| 117 | 17.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 135 | 17.09 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 138 | 17.10 | humidity | 60 | 90 | > th | dose independent | rect. | 4 | 19 |
| 142 | 17.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 174 | 17.13 | temperature | 25 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 175 | 17.14 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 22 |
| 194 | 17.14 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 198 | 17.14 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 213 | 17.15 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 217 | 17.16 | temperature | 25 | 90 | > th | dose dependent | sin | 0 | NA |
| 226 | 17.16 | humidity | 50 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 232 | 17.16 | radiation | 1 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 234 | 17.17 | temperature | 25 | 270 | > th | dose dependent | sin | 4 | NA |
| 235 | 17.17 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 244 | 17.17 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 251 | 17.18 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 23 |
| 272 | 17.19 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 14 |
| 296 | 17.20 | humidity | 50 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 306 | 17.21 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 23 |
| 401 | 17.25 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 4 | 19 |
| 402 | 17.25 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 23 |
| 422 | 17.26 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 11 |
| 425 | 17.26 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 21 |
| 450 | 17.27 | radiation | 1 | 720 | > th | dose independent | sin | 0 | NA |
| 479 | 17.28 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 2 |
| 481 | 17.28 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 15 |
| 483 | 17.28 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 20 |
| 484 | 17.28 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 23 |
| 505 | 17.28 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 568 | 17.30 | humidity | 50 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 593 | 17.31 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 13 |
| 613 | 17.31 | radiation | 30 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 615 | 17.31 | humidity | 50 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 622 | 17.31 | temperature | 25 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 624 | 17.31 | radiation | 40 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 644 | 17.32 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 672 | 17.33 | radiation | 30 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 704 | 17.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 715 | 17.35 | humidity | 60 | 90 | > th | dose independent | rect. | 12 | 11 |
| 741 | 17.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 743 | 17.36 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 20 |
| 744 | 17.36 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 21 |
| 763 | 17.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 769 | 17.37 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 18 |
| 803 | 17.38 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 863 | 17.38 | humidity | 50 | 90 | > th | dose dependent | rect. | 12 | 11 |
| 925 | 17.40 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 947 | 17.40 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 982 | 17.41 | humidity | 50 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 983 | 17.42 | radiation | 1 | 720 | < th | dose independent | sin | 0 | NA |
| 991 | 17.42 | radiation | 40 | 270 | < th | dose independent | rect. | 1 | 22 |
| 995 | 17.42 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |