Os10g0393100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0393100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.63 | 0.213 | 12.1 | -0.475 | 0.184 | 0.604 | 0.114 | -0.807 | 0.0408 | 7.4 | 26.05 | 4716 | -- | -- |
| 20.81 | 0.212 | 12.1 | -0.287 | 0.178 | 0.526 | 0.0917 | -- | 0.0651 | 7.6 | 25.51 | 4727 | -- | -- |
| 20.66 | 0.212 | 12.1 | -0.471 | 0.184 | 0.604 | -- | -0.799 | 0.0406 | 7.57 | 26.04 | 4718 | -- | -- |
| 20.83 | 0.213 | 12.1 | -0.28 | 0.182 | 0.523 | -- | -- | 0.0768 | 7.6 | 26 | 4725 | -- | -- |
| 22.23 | 0.22 | 12.1 | -0.465 | -- | 0.618 | -- | -0.818 | 0.0446 | -- | 26 | 4511 | -- | -- |
| 30.01 | 0.257 | 12.1 | -0.109 | 0.154 | -- | 0.133 | -- | 0.0854 | 6.97 | -- | -- | -- | -- |
| 30.04 | 0.257 | 12.1 | -0.106 | 0.154 | -- | -- | -- | 0.0853 | 7.33 | -- | -- | -- | -- |
| 22.35 | 0.22 | 12.1 | -0.277 | -- | 0.539 | -- | -- | 0.0666 | -- | 25.3 | 4494 | -- | -- |
| 22.62 | 0.221 | 12.1 | -- | 0.174 | 0.449 | -- | -- | 0.127 | 7.84 | 27.16 | 4711 | -- | -- |
| 31.3 | 0.261 | 12.1 | -0.103 | -- | -- | -- | -- | 0.0879 | -- | -- | -- | -- | -- |
| 30.34 | 0.258 | 12.1 | -- | 0.153 | -- | -- | -- | 0.0971 | 7.37 | -- | -- | -- | -- |
| 24.12 | 0.229 | 12.1 | -- | -- | 0.455 | -- | -- | 0.13 | -- | 27.1 | 4497 | -- | -- |
| 31.59 | 0.262 | 12.1 | -- | -- | -- | -- | -- | 0.0994 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 2 | 20.63 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 11 | 20.99 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 14 | 21.01 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 17 | 21.01 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 20 |
| 21 | 21.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 54 | 21.04 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 21 |
| 64 | 21.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 8 |
| 65 | 21.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 76 | 21.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 100 | 21.06 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 107 | 21.06 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 19 |
| 117 | 21.06 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 127 | 21.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 162 | 21.08 | temperature | 25 | 4320 | > th | dose dependent | sin | 16 | NA |
| 186 | 21.09 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 195 | 21.09 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 14 |
| 218 | 21.10 | temperature | 25 | 4320 | > th | dose dependent | sin | 3 | NA |
| 258 | 21.11 | temperature | 25 | 4320 | > th | dose dependent | sin | 1 | NA |
| 261 | 21.11 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 9 |
| 360 | 21.17 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 452 | 21.22 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 523 | 21.27 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 606 | 21.32 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 621 | 21.33 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 675 | 21.34 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 782 | 21.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 918 | 21.44 | temperature | 30 | 4320 | < th | dose independent | sin | 16 | NA |
| 988 | 21.45 | temperature | 10 | 4320 | > th | dose dependent | sin | 19 | NA |