BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0393100 Os10g0393100|AK072853
(371 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373 546 e-156
AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541 112 2e-25
AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541 109 2e-24
AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345 108 6e-24
AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537 107 1e-23
AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541 105 4e-23
>AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373
Length = 372
Score = 546 bits (1406), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/374 (71%), Positives = 311/374 (83%), Gaps = 5/374 (1%)
Query: 1 MESLWKLSYLLEPASLALILTXXXXXXXXXXXXLDHGREMERNLDFSEASITLDRSQALM 60
ME+LW L YLLEPA LI+T L++G+EMERN DFSEASITLD SQALM
Sbjct: 1 METLWTLLYLLEPAPATLIVTAVTVTFASAFRALNYGKEMERNRDFSEASITLDSSQALM 60
Query: 61 IPLASSCSLLLMFYLFSSVSHLVTAFTAVASAMALFFCLSPYVNCVRSRLGVGDPFVSRC 120
IP+ SSCSLLLMFYLFSSVS L+TAFTA+AS +LF+ LSPY ++++LG+ DPF+SRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAIASVSSLFYWLSPYAVYMKTQLGLSDPFLSRC 120
Query: 121 CSKPFTRLQGLLVAICVGTVVAWLVSGHWLLNNLLGISICIAFVSHVRLPNIKICALLLV 180
CSK FTR+QGLL+ C TVVAWL+SGHW+LNNLLGISICIAFVSHVRLPNIKICA+LLV
Sbjct: 121 CSKSFTRIQGLLLVACAMTVVAWLISGHWVLNNLLGISICIAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELPVKLV 240
CLFVYD+FWVFFSERFFGANVMV+VATQ+ASNPVHTVAN L+LPGLQLITKKLELPVK+V
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVAVATQQASNPVHTVANSLNLPGLQLITKKLELPVKIV 240
Query: 241 FPRSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFDHRKIKDMSVSQDMPPSKQRK 300
FPR+L+GG+ PG S D+MMLGLGDMAIP MLLALVL FDHRK +D+ D+ SK K
Sbjct: 241 FPRNLLGGVVPGVSASDFMMLGLGDMAIPAMLLALVLCFDHRKTRDVVNIFDLKSSKGHK 300
Query: 301 YVWYALTGYGVGLVTALAAGILSQSPQPALLYLVPSTLGPVMYMSWLRNELWELWEG--- 357
Y+WYAL GY +GLV ALAAG+L+ SPQPALLYLVPSTLGPV++MSW R +L ELWEG
Sbjct: 301 YIWYALPGYAIGLVAALAAGVLTHSPQPALLYLVPSTLGPVIFMSWRRKDLAELWEGPAL 360
Query: 358 SRPIINDKAHLLEV 371
S PI +K+H +E+
Sbjct: 361 SNPI--EKSHEIEI 372
>AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541
Length = 540
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 152/333 (45%), Gaps = 46/333 (13%)
Query: 35 DHGREMERNLDFSEASITLDRSQALMIPLASSCSLLLMFYLFSS--VSHLVTAFTAVASA 92
D E+ D + ++ A+ + +S L++++ L S V LV F +
Sbjct: 231 DAIDEIPNTNDGGSGVVEINSISAIFFVVLASGFLVILYKLMSYWFVELLVVVF-CIGGV 289
Query: 93 MALFFCLSPYVNCVRSRLGVGDPFVSRCCSKPFTRLQGLLVAICVGTVVAWLV----SGH 148
L CL ++ R D +V P + L + C+ V W V S
Sbjct: 290 EGLQTCLVALLSRWFQR--AADTYVKVPFLGPISYLTLAVSPFCIVFAVLWAVYRVHSFA 347
Query: 149 WLLNNLLGISICIAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFFGANVMVSVATQ 208
W+ ++LGI++ I + V +PN+K+ +LL C F+YD+FWVF S++ F +VM+ V
Sbjct: 348 WIGQDVLGIALIITVLQIVHVPNLKVGTVLLSCAFLYDIFWVFVSKKLFHESVMIVV--- 404
Query: 209 KASNPVHTVANKLSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSPGDYMMLGLGDMAI 268
T +K G +P+ L PR G Y ++G GD+ +
Sbjct: 405 -------TRGDKSGEDG---------IPMLLKIPRMF-------DPWGGYSIIGFGDILL 441
Query: 269 PGMLLALVLSFDHRKIKDMSVSQDMPPSKQRKYVWYALTGYGVG-LVTALAAGILSQSPQ 327
PG+L+A L +D K + Y +A+ YG+G L+T +A ++ Q
Sbjct: 442 PGLLIAFALRYDWLANKTLRTG----------YFIWAMVAYGLGLLITYVALNLMDGHGQ 491
Query: 328 PALLYLVPSTLGPVMYMSWLRNELWELWEGSRP 360
PALLY+VP TLG ++ ++ R++LW LW P
Sbjct: 492 PALLYIVPFTLGTMLTLARKRDDLWILWTKGEP 524
>AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541
Length = 540
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 44/321 (13%)
Query: 47 SEASITLDRSQALMIPLASSCSLLLMFYLFSS--VSHLVTAFTAVASAMALFFCLSPYVN 104
S + + A++ + +SC L++++ L S + LV F + L CL ++
Sbjct: 243 SRGVVEVTVISAILFVVVASCFLIMLYKLMSFWFIEVLVVLF-CIGGVEGLQTCLVSLLS 301
Query: 105 CVRSRLGVGDPFVSRCCSKPFTRLQGLLVAICVGTVVAWLV----SGHWLLNNLLGISIC 160
C R G+ +V + L + C+ V W V S W+ ++LGIS+
Sbjct: 302 CFRWFRRFGESYVKVPFLGAVSYLTLAICPFCIAFAVFWAVKRQYSYAWIGQDILGISLI 361
Query: 161 IAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANK 220
I + VR+PN+K+ +LL C F+YD+FWVF S+ +F +VM+ VA S
Sbjct: 362 ITVLQIVRVPNLKVGFVLLSCAFMYDIFWVFVSKWWFRESVMIVVARGDRSG-------- 413
Query: 221 LSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFD 280
+ +P+ L PR G Y ++G GD+ +PG+L+ L +D
Sbjct: 414 -----------EDGIPMLLKIPRMF-------DPWGGYSIIGFGDIILPGLLVTFALRYD 455
Query: 281 HRKIKDMSVSQDMPPSKQRKYVWYALTGYGVG-LVTALAAGILSQSPQPALLYLVPSTLG 339
K + + Y ++ YG+G L+T +A ++ QPALLY+VP LG
Sbjct: 456 WLANKRL----------KSGYFLGTMSAYGLGLLITYIALNLMDGHGQPALLYIVPFILG 505
Query: 340 PVMYMSWLRNELWELWEGSRP 360
+ + R +L LW P
Sbjct: 506 TLFVLGHKRGDLKTLWTTGEP 526
>AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345
Length = 344
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 105/217 (48%), Gaps = 54/217 (24%)
Query: 125 FTRLQGLLVAICVGTVV-AWLV-SGHWLLNNLLGISICIAFVSHVRLPNIKICALLLVCL 182
FT+ Q +VA GT AW HWL NN+LG+S CI + + L + K A+LL L
Sbjct: 137 FTKSQ--VVAGIPGTFFCAWYAWKKHWLANNILGLSFCIQGIEMLSLGSFKTGAILLAGL 194
Query: 183 FVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELPVKLVFP 242
F YD+FWVFF+ VMVSVA K + P+KL+FP
Sbjct: 195 FFYDIFWVFFTP------VMVSVA------------------------KSFDAPIKLLFP 224
Query: 243 RSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFDHRKIKDMSVSQDMPPSKQRKYV 302
G + Y MLGLGD+ IPG+ +AL L FD + +Q +Y
Sbjct: 225 T--------GDALRPYSMLGLGDIVIPGIFVALALRFDVSR------------RRQPQYF 264
Query: 303 WYALTGYGVGLVTALAAGILSQSPQPALLYLVPSTLG 339
A GY VG++ + Q+ QPALLY+VP+ +G
Sbjct: 265 TSAFIGYAVGVILTIVVMNWFQAAQPALLYIVPAVIG 301
>AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537
Length = 536
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 68/328 (20%)
Query: 47 SEASITLDRSQALMIPLASSCSLLLMFYLFSSVSHLVTAFTAVASAMALFFCLSPYVNCV 106
E ++ + A++ +++S L+L+F+ SS L+ + +FF + +
Sbjct: 242 EEETLDISAMGAVIFVISASTFLVLLFFFMSSWFILI---------LTIFFV----IGGM 288
Query: 107 RSRLGVGDPFVSRCCSKPFTR------------LQGLLVAICVGTVVAWLV----SGHWL 150
+ + ++R CSK + L +++ C + W + S W
Sbjct: 289 QGMHNINVTLITRRCSKCGQKNLKLPLLGNTSILSLVVLLFCFVVAILWFMNRKTSHAWA 348
Query: 151 LNNLLGISICIAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFFGANVMVSVATQKA 210
++ GI + I + RLPNI++ +LL C F YD+FWVF S F +VM++VA +
Sbjct: 349 GQDIFGICMMINVLQVARLPNIRVATILLCCAFFYDIFWVFISPLIFKQSVMIAVA--RG 406
Query: 211 SNPVHTVANKLSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSP-GDYMMLGLGDMAIP 269
S +P+ L PR S P G Y M+G GD+ P
Sbjct: 407 SKDTGE-----------------SIPMLLRIPRL--------SDPWGGYNMIGFGDILFP 441
Query: 270 GMLLALVLSFDHRKIKDMSVSQDMPPSKQRKYVWYALTGYGVGL-VTALAAGILSQSPQP 328
G+L+ + FD K +S Y + + GYG+GL +T L +++ QP
Sbjct: 442 GLLICFIFRFDKENNKGVS----------NGYFPWLMFGYGLGLFLTYLGLYVMNGHGQP 491
Query: 329 ALLYLVPSTLGPVMYMSWLRNELWELWE 356
ALLYLVP TLG + + +R EL +LW
Sbjct: 492 ALLYLVPCTLGITVILGLVRKELRDLWN 519
>AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541
Length = 540
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 42 RNLDFSEASITLDRSQALMIPLASSCSLLLMFYLFSS-VSHLVTAFTAVASAMALFFCLS 100
R D + + + + A+ + +S LLL+FY SS ++T F + + +
Sbjct: 240 RKDDPEKEILDISVTGAVFFIVTASIFLLLLFYFMSSWFVWVLTIFFCIGGMQGMHNIIM 299
Query: 101 PYV--NCVR-SRLGVGDPFVSRCCSKPFTRLQGLLVAICVGTVVAWLVSGH----WLLNN 153
+ C +R V P + + L L+ +C+ V W + H W+ +
Sbjct: 300 AVILRKCRHLARKSVKLPLLGT-----MSVLSLLVNIVCLAFAVFWFIKRHTSYSWVGQD 354
Query: 154 LLGISICIAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFFGANVMVSVATQKASNP 213
+LGI + I + VRLPNIK+ +LL C FVYD+FWVF S F +VM+ VA +S
Sbjct: 355 ILGICLMITALQVVRLPNIKVATVLLCCAFVYDIFWVFISPLIFHESVMIVVAQGDSST- 413
Query: 214 VHTVANKLSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSP-GDYMMLGLGDMAIPGML 272
+P+ L PR P G Y M+G GD+ PG+L
Sbjct: 414 ------------------GESIPMLLRIPRFF--------DPWGGYDMIGFGDILFPGLL 447
Query: 273 LALVLSFDHRKIKDMSVSQDMPPSKQRKYVWYALTGYGV-GLVTALAAGILSQSPQPALL 331
++ +D KIK +S Y + GYG+ L+T L ++ QPALL
Sbjct: 448 ISFASRYD--KIKKRVISN--------GYFLWLTIGYGIGLLLTYLGLYLMDGHGQPALL 497
Query: 332 YLVPSTLGPVMYMSWLRNELWELWE 356
Y+VP TLG + + +R EL ELW
Sbjct: 498 YIVPCTLGLAVILGLVRGELKELWN 522
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,710,626
Number of extensions: 299090
Number of successful extensions: 935
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 924
Number of HSP's successfully gapped: 6
Length of query: 371
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 271
Effective length of database: 8,364,969
Effective search space: 2266906599
Effective search space used: 2266906599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)