Os11g0433200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Growth-on protein GRO10.
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Os11g0433200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Growth-on protein GRO10.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.61 | 0.197 | 9.27 | 0.217 | 0.199 | -0.738 | -0.0667 | 0.0921 | 0.015 | 7.59 | 21.9 | 97 | -- | -- |
| 17.58 | 0.195 | 9.27 | 0.197 | 0.196 | -0.727 | -0.0757 | -- | 0.00538 | 7.64 | 22.44 | 89 | -- | -- |
| 17.6 | 0.195 | 9.27 | 0.211 | 0.193 | -0.734 | -- | 0.139 | 0.0148 | 7.45 | 22.22 | 95 | -- | -- |
| 17.6 | 0.195 | 9.27 | 0.195 | 0.198 | -0.727 | -- | -- | 0.00527 | 7.61 | 22.47 | 89 | -- | -- |
| 19.05 | 0.203 | 9.27 | 0.253 | -- | -0.817 | -- | 0.348 | 0.0144 | -- | 23.08 | 160 | -- | -- |
| 26.39 | 0.241 | 9.3 | 0.0441 | 0.421 | -- | 0.203 | -- | -0.109 | 5.05 | -- | -- | -- | -- |
| 26.5 | 0.241 | 9.3 | 0.0439 | 0.423 | -- | -- | -- | -0.11 | 5.08 | -- | -- | -- | -- |
| 19.14 | 0.204 | 9.28 | 0.207 | -- | -0.795 | -- | -- | 0.00823 | -- | 22.86 | 155 | -- | -- |
| 18.5 | 0.201 | 9.28 | -- | 0.262 | -0.69 | -- | -- | -0.0242 | 7.56 | 22.74 | 84 | -- | -- |
| 35.87 | 0.28 | 9.3 | 0.0591 | -- | -- | -- | -- | -0.0988 | -- | -- | -- | -- | -- |
| 26.55 | 0.241 | 9.3 | -- | 0.423 | -- | -- | -- | -0.114 | 5.07 | -- | -- | -- | -- |
| 20.2 | 0.209 | 9.28 | -- | -- | -0.769 | -- | -- | -0.0214 | -- | 23.23 | 156 | -- | -- |
| 35.96 | 0.28 | 9.3 | -- | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 6 | 17.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 12 | 17.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 16 | 17.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 19 | 17.26 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 36 | 17.42 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 39 | 17.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 45 | 17.50 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 70 | 17.69 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 83 | 17.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 98 | 17.93 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 114 | 18.01 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 129 | 18.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 134 | 18.06 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 140 | 18.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 150 | 18.12 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 157 | 18.14 | temperature | 20 | 90 | > th | dose dependent | sin | 1 | NA |
| 337 | 18.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 377 | 18.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 503 | 18.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 512 | 18.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 538 | 18.56 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 558 | 18.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 633 | 18.63 | temperature | 20 | 4320 | > th | dose dependent | sin | 9 | NA |
| 643 | 18.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 666 | 18.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 7 |
| 720 | 18.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 722 | 18.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 761 | 18.71 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 763 | 18.71 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 811 | 18.73 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 860 | 18.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 894 | 18.77 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 921 | 18.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 924 | 18.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 950 | 18.79 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 1 |