Os01g0914700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
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Os01g0914700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A22B, minor histocompatibility antigen H13 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.29 | 0.752 | 2.99 | -0.243 | 0.259 | -1.05 | 0.664 | 1.6 | -0.000701 | 6.94 | 4.8 | 2405 | -- | -- |
| 257.4 | 0.747 | 3.02 | -0.205 | 0.249 | -1.17 | 0.644 | -- | -0.0148 | 6.85 | 4.803 | 2445 | -- | -- |
| 257.36 | 0.747 | 2.99 | -0.236 | 0.266 | -1.02 | -- | 1.71 | -0.0013 | 6.48 | 4.87 | 2400 | -- | -- |
| 258.44 | 0.749 | 3.01 | -0.175 | 0.273 | -1.28 | -- | -- | -0.0192 | 6.55 | 4.807 | 2404 | -- | -- |
| 260.89 | 0.752 | 2.99 | -0.23 | -- | -1.02 | -- | 1.61 | 0.0017 | -- | 4.857 | 2445 | -- | -- |
| 276.05 | 0.779 | 3.02 | -0.49 | 0.251 | -- | 0.632 | -- | -0.0423 | 6.16 | -- | -- | -- | -- |
| 276.26 | 0.778 | 3.02 | -0.487 | 0.279 | -- | -- | -- | -0.0462 | 4.6 | -- | -- | -- | -- |
| 261.79 | 0.754 | 3.02 | -0.186 | -- | -1.27 | -- | -- | -0.0218 | -- | 4.8 | 2454 | -- | -- |
| 259.3 | 0.75 | 3.01 | -- | 0.262 | -1.35 | -- | -- | -0.0039 | 6.85 | 4.852 | 2404 | -- | -- |
| 280.39 | 0.782 | 3.02 | -0.477 | -- | -- | -- | -- | -0.0389 | -- | -- | -- | -- | -- |
| 282.52 | 0.786 | 3.01 | -- | 0.27 | -- | -- | -- | 0.00808 | 4.64 | -- | -- | -- | -- |
| 262.57 | 0.755 | 3.01 | -- | -- | -1.35 | -- | -- | -0.00141 | -- | 4.804 | 2491 | -- | -- |
| 286.39 | 0.79 | 3.01 | -- | -- | -- | -- | -- | 0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.93 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 2 | 240.94 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 19 | 248.53 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 23 | 249.19 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 25 | 249.44 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 28 | 249.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 29 | 249.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 42 | 249.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 43 | 249.85 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 52 | 250.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 54 | 250.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 55 | 250.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 77 | 252.39 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 78 | 252.46 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 89 | 252.68 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 90 | 252.69 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 168 | 254.47 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 201 | 255.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 221 | 256.01 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 298 | 256.88 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 314 | 257.04 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 322 | 257.11 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 337 | 257.21 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 343 | 257.24 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 358 | 257.35 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 366 | 257.45 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 386 | 257.65 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 24 | 16 |
| 388 | 257.65 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 24 | 19 |
| 436 | 257.79 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 443 | 257.80 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 445 | 257.81 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 487 | 257.91 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 488 | 257.91 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 495 | 257.92 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 514 | 257.95 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 13 |
| 546 | 257.99 | temperature | 20.0 | 14400 | < th | dose dependent | no | NA | NA |
| 607 | 258.06 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 668 | 258.16 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 688 | 258.19 | wind | 7.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 754 | 258.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 801 | 258.39 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 834 | 258.46 | wind | 7.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 845 | 258.47 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 849 | 258.48 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 854 | 258.49 | wind | 5.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 856 | 258.50 | wind | 5.0 | 720 | < th | dose independent | sin | 10 | NA |
| 882 | 258.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 906 | 258.62 | wind | 5.0 | 720 | > th | dose independent | sin | 11 | NA |
| 923 | 258.66 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 943 | 258.71 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 960 | 258.79 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 971 | 258.84 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 1000 | 258.94 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 3 |