BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0914700 Os01g0914700|AK069261
(523 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537 449 e-126
AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541 439 e-123
AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541 411 e-115
AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541 392 e-109
AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373 106 3e-23
AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345 98 1e-20
>AT1G05820.1 | chr1:1749776-1753767 FORWARD LENGTH=537
Length = 536
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/496 (46%), Positives = 325/496 (65%), Gaps = 14/496 (2%)
Query: 37 GADSEFEDGVSPKFPGCDNPFQKVKVTYWVDGDERSSLTGITARFGEVLPATGSDGDKRK 96
GAD++ D +PK PGC N FQ VKV WV+G+ + T +TA+FG +LP+ K
Sbjct: 26 GADTK--DVTAPKIPGCSNEFQMVKVENWVNGENGETFTAMTAQFGTMLPSDKDKAVKLP 83
Query: 97 AVVPAPKTGCAKSSAPLASSIAVAERGECTFLEKAKTAESGGAAALLLINDEDDLQKMVC 156
+ P C+ ++ L+ SIA++ RGEC F KA+ A++GGAAAL+LIND+++L +MVC
Sbjct: 84 VALTTPLDSCSNLTSKLSWSIALSVRGECAFTVKAQVAQAGGAAALVLINDKEELDEMVC 143
Query: 157 TQNDTVPNIGIPVVMVSQSAGRKILSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAVGS 216
+ DT N+ IP++M++ S+G + + KV++L+YAP+ P D A+ FLWLM+VG+
Sbjct: 144 GEKDTSLNVSIPILMITTSSGDALKKSIMQNKKVELLLYAPKSPIVDYAVVFLWLMSVGT 203
Query: 217 VACASVWSFVVV---GDED-------KNAPTLGGEEAADSEIVELQTKTALVFIVTASXX 266
V ASVWS V DE K++ + A+ E +++ A++F+++AS
Sbjct: 204 VFVASVWSHVTSPKKNDEQYDELSPKKSSNVDATKGGAEEETLDISAMGAVIFVISASTF 263
Query: 267 XXXXXXXKSTWSAWLLVVLFCLSGLQGLHYVASTLIVRTCDRCREAKVALPVLGNVTVVT 326
S+W +L + F + G+QG+H + TLI R C +C + + LP+LGN ++++
Sbjct: 264 LVLLFFFMSSWFILILTIFFVIGGMQGMHNINVTLITRRCSKCGQKNLKLPLLGNTSILS 323
Query: 327 LVILPLALIFVVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFMY 386
LV+L + ++W +++ + AW GQD+ GICMMI VLQV LPNI+VAT LL AF Y
Sbjct: 324 LVVLLFCFVVAILWFMNRKTSHAWAGQDIFGICMMINVLQVARLPNIRVATILLCCAFFY 383
Query: 387 DIFWVFISPFIFKKSVMITVARGS-DEGPSLPMVLKMPKEFDTWNGYDMIGFGDILFPGL 445
DIFWVFISP IFK+SVMI VARGS D G S+PM+L++P+ D W GY+MIGFGDILFPGL
Sbjct: 384 DIFWVFISPLIFKQSVMIAVARGSKDTGESIPMLLRIPRLSDPWGGYNMIGFGDILFPGL 443
Query: 446 LVAFSFRYDRANGKDLTDGYFLCLMIGYAFGLSCTYVGLYLMK-SGQPALLYLVPSTLGT 504
L+ F FR+D+ N K +++GYF LM GY GL TY+GLY+M GQPALLYLVP TLG
Sbjct: 444 LICFIFRFDKENNKGVSNGYFPWLMFGYGLGLFLTYLGLYVMNGHGQPALLYLVPCTLGI 503
Query: 505 IVTLGAKRGELSQLWN 520
V LG R EL LWN
Sbjct: 504 TVILGLVRKELRDLWN 519
>AT2G43070.1 | chr2:17911233-17914776 REVERSE LENGTH=541
Length = 540
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/497 (46%), Positives = 323/497 (64%), Gaps = 11/497 (2%)
Query: 35 AAGADSEFEDGVSPKFPGCDNPFQKVKVTYWVDGDERSSLTGITARFGEVLPATGSDGDK 94
AA D + + S + PGC N FQ VKV WVDG E LTG+TA+FG LP+ +
Sbjct: 26 AAADDVSWTEDSSLESPGCTNKFQMVKVLNWVDGVEGDFLTGLTAQFGAALPSVPDQALR 85
Query: 95 RKAVVPAPKTGCAKSSAPLASSIAVAERGECTFLEKAKTAESGGAAALLLINDEDDLQKM 154
A P C+ S+ L IA++ RG C F EKAK AE+ GA+ALL+IND++DL +M
Sbjct: 86 FPAAFVDPLDSCSHLSSRLDGHIALSIRGNCAFTEKAKHAEAAGASALLVINDKEDLDEM 145
Query: 155 VCTQNDTVPNIGIPVVMVSQSAGRKILSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAV 214
C + DT N+ IPV+M+S+S+G + M V++L+YAP++P+ D L LMAV
Sbjct: 146 GCMEKDTSLNVSIPVLMISKSSGDALNKSMVDNKNVELLLYAPKRPAVDLTAGLLLLMAV 205
Query: 215 GSVACASVWSFVVVGDEDKNAPTLGGEEAA---------DSEIVELQTKTALVFIVTASX 265
G+V AS+WS + D+ + ++ ++ + + EI+++ A+ FIVTAS
Sbjct: 206 GTVVVASLWSELTDPDQANESYSILAKDVSSAGTRKDDPEKEILDISVTGAVFFIVTASI 265
Query: 266 XXXXXXXXKSTWSAWLLVVLFCLSGLQGLHYVASTLIVRTCDRCREAKVALPVLGNVTVV 325
S+W W+L + FC+ G+QG+H + +I+R C V LP+LG ++V+
Sbjct: 266 FLLLLFYFMSSWFVWVLTIFFCIGGMQGMHNIIMAVILRKCRHLARKSVKLPLLGTMSVL 325
Query: 326 TLVILPLALIFVVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFM 385
+L++ + L F V W + +++ ++WVGQD++GIC+MI LQVV LPNIKVAT LL AF+
Sbjct: 326 SLLVNIVCLAFAVFWFIKRHTSYSWVGQDILGICLMITALQVVRLPNIKVATVLLCCAFV 385
Query: 386 YDIFWVFISPFIFKKSVMITVARG-SDEGPSLPMVLKMPKEFDTWNGYDMIGFGDILFPG 444
YDIFWVFISP IF +SVMI VA+G S G S+PM+L++P+ FD W GYDMIGFGDILFPG
Sbjct: 386 YDIFWVFISPLIFHESVMIVVAQGDSSTGESIPMLLRIPRFFDPWGGYDMIGFGDILFPG 445
Query: 445 LLVAFSFRYDRANGKDLTDGYFLCLMIGYAFGLSCTYVGLYLMK-SGQPALLYLVPSTLG 503
LL++F+ RYD+ + +++GYFL L IGY GL TY+GLYLM GQPALLY+VP TLG
Sbjct: 446 LLISFASRYDKIKKRVISNGYFLWLTIGYGIGLLLTYLGLYLMDGHGQPALLYIVPCTLG 505
Query: 504 TIVTLGAKRGELSQLWN 520
V LG RGEL +LWN
Sbjct: 506 LAVILGLVRGELKELWN 522
>AT1G63690.2 | chr1:23618490-23622082 FORWARD LENGTH=541
Length = 540
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/492 (42%), Positives = 296/492 (60%), Gaps = 10/492 (2%)
Query: 39 DSEFEDGVSPKFPGCDNPFQKVKVTYWVDGDERSSLTGITARFGEVLPATGSDGDKRKAV 98
D +D ++PK PGC+N F VKV W+DG E G+ ARFG+ + + + ++ V
Sbjct: 29 DIVHQDNLAPKKPGCENDFVLVKVQTWIDGVENEEFVGVGARFGKRIVSKEKNANQTHLV 88
Query: 99 VPAPKTGCAKSSAPLASSIAVAERGECTFLEKAKTAESGGAAALLLINDEDDLQKMVCTQ 158
P+ C L+ + + ERG C F KA AE+ GA+ALL+IN++ +L KMVC
Sbjct: 89 FANPRDSCTPLKNKLSGDVVIVERGNCRFTAKANNAEAAGASALLIINNQKELYKMVCEP 148
Query: 159 NDTVPNIGIPVVMVSQSAGRKILSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAVGSVA 218
++T +I IP VM+ Q AG + + +KV +Y+P +P+ D A FLWLMA+G++
Sbjct: 149 DETDLDIQIPAVMLPQDAGASLQKMLANSSKVSAQLYSPRRPAVDVAEVFLWLMAIGTIL 208
Query: 219 CASVWS----FVVVGDEDK----NAPTLGGEEAADSEIVELQTKTALVFIVTASXXXXXX 270
CAS WS + DK + S +VE+ + +A+ F+V AS
Sbjct: 209 CASYWSAWSAREAAIEHDKLLKDAIDEIPNTNDGGSGVVEINSISAIFFVVLASGFLVIL 268
Query: 271 XXXKSTWSAWLLVVLFCLSGLQGLHYVASTLIVRTCDRCREAKVALPVLGNVTVVTLVIL 330
S W LLVV+FC+ G++GL L+ R R + V +P LG ++ +TL +
Sbjct: 269 YKLMSYWFVELLVVVFCIGGVEGLQTCLVALLSRWFQRAADTYVKVPFLGPISYLTLAVS 328
Query: 331 PLALIFVVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFMYDIFW 390
P ++F V+WAV++ FAW+GQD++GI ++I VLQ+VH+PN+KV T LL AF+YDIFW
Sbjct: 329 PFCIVFAVLWAVYRVHSFAWIGQDVLGIALIITVLQIVHVPNLKVGTVLLSCAFLYDIFW 388
Query: 391 VFISPFIFKKSVMITVARGSDEGPS-LPMVLKMPKEFDTWNGYDMIGFGDILFPGLLVAF 449
VF+S +F +SVMI V RG G +PM+LK+P+ FD W GY +IGFGDIL PGLL+AF
Sbjct: 389 VFVSKKLFHESVMIVVTRGDKSGEDGIPMLLKIPRMFDPWGGYSIIGFGDILLPGLLIAF 448
Query: 450 SFRYDRANGKDLTDGYFLCLMIGYAFGLSCTYVGLYLMK-SGQPALLYLVPSTLGTIVTL 508
+ RYD K L GYF+ M+ Y GL TYV L LM GQPALLY+VP TLGT++TL
Sbjct: 449 ALRYDWLANKTLRTGYFIWAMVAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTMLTL 508
Query: 509 GAKRGELSQLWN 520
KR +L LW
Sbjct: 509 ARKRDDLWILWT 520
>AT1G01650.1 | chr1:233188-237647 REVERSE LENGTH=541
Length = 540
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/499 (42%), Positives = 290/499 (58%), Gaps = 13/499 (2%)
Query: 36 AGADSEFEDGVSPKFPGCDNPFQKVKVTYWVDGDERSSLTGITARFGEVLPATGSDGDKR 95
D D P+ PGC+N F VKV V+G E + G+ ARFG L +
Sbjct: 25 CAGDIVHHDDSLPQRPGCNNNFVLVKVPTRVNGSEYTEYVGVGARFGPTLESKEKHATLI 84
Query: 96 KAVVPAPKTGCAKSSAPLASSIAVAERGECTFLEKAKTAESGGAAALLLINDEDDLQKMV 155
K + P C+ L + + RG+C+F K K AE+ GA+A+L+IN+ DL KMV
Sbjct: 85 KLAIADPPDCCSTPKNKLTGEVILVHRGKCSFTTKTKVAEAAGASAILIINNSTDLFKMV 144
Query: 156 CTQNDTVPNIGIPVVMVSQSAGRKILSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAVG 215
C + + V +I IPVVM+ AGR + + + A V + +Y+P++P+ D A FLWLMAVG
Sbjct: 145 CEKGENVLDITIPVVMLPVDAGRSLENIVKSNAIVTLQLYSPKRPAVDVAEVFLWLMAVG 204
Query: 216 SVACASVWSFVVVGDE---------DKNAPTLGGEEAADSEIVELQTKTALVFIVTASXX 266
++ CAS WS V +E D + L + +VE+ +A++F+V AS
Sbjct: 205 TILCASYWSAWTVREEAIEQDKLLKDGSDELLQLSTTSSRGVVEVTVISAILFVVVASCF 264
Query: 267 XXXXXXXKSTWSAWLLVVLFCLSGLQGLHYVASTLI--VRTCDRCREAKVALPVLGNVTV 324
S W +LVVLFC+ G++GL +L+ R R E+ V +P LG V+
Sbjct: 265 LIMLYKLMSFWFIEVLVVLFCIGGVEGLQTCLVSLLSCFRWFRRFGESYVKVPFLGAVSY 324
Query: 325 VTLVILPLALIFVVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAF 384
+TL I P + F V WAV + +AW+GQD++GI ++I VLQ+V +PN+KV LL AF
Sbjct: 325 LTLAICPFCIAFAVFWAVKRQYSYAWIGQDILGISLIITVLQIVRVPNLKVGFVLLSCAF 384
Query: 385 MYDIFWVFISPFIFKKSVMITVARGSDEGPS-LPMVLKMPKEFDTWNGYDMIGFGDILFP 443
MYDIFWVF+S + F++SVMI VARG G +PM+LK+P+ FD W GY +IGFGDI+ P
Sbjct: 385 MYDIFWVFVSKWWFRESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILP 444
Query: 444 GLLVAFSFRYDRANGKDLTDGYFLCLMIGYAFGLSCTYVGLYLMK-SGQPALLYLVPSTL 502
GLLV F+ RYD K L GYFL M Y GL TY+ L LM GQPALLY+VP L
Sbjct: 445 GLLVTFALRYDWLANKRLKSGYFLGTMSAYGLGLLITYIALNLMDGHGQPALLYIVPFIL 504
Query: 503 GTIVTLGAKRGELSQLWNA 521
GT+ LG KRG+L LW
Sbjct: 505 GTLFVLGHKRGDLKTLWTT 523
>AT4G33410.1 | chr4:16081640-16083119 FORWARD LENGTH=373
Length = 372
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 41/221 (18%)
Query: 337 VVVWAVHQNSPFAWVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFMYDIFWVFISPF 396
VV W + + WV +L+GI + I + V LPNIK+ LLV F+YDIFWVF S
Sbjct: 140 VVAWLISGH----WVLNNLLGISICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSER 195
Query: 397 IFKKSVMITVARGSDEGP--------------------SLPMVLKMPKEF-------DTW 429
F +VM+ VA P LP+ + P+ +
Sbjct: 196 FFGANVMVAVATQQASNPVHTVANSLNLPGLQLITKKLELPVKIVFPRNLLGGVVPGVSA 255
Query: 430 NGYDMIGFGDILFPGLLVAFSFRYDRANGKDLTD----------GYFLCLMIGYAFGLSC 479
+ + M+G GD+ P +L+A +D +D+ + Y + GYA GL
Sbjct: 256 SDFMMLGLGDMAIPAMLLALVLCFDHRKTRDVVNIFDLKSSKGHKYIWYALPGYAIGLVA 315
Query: 480 TYVGLYLMKSGQPALLYLVPSTLGTIVTLGAKRGELSQLWN 520
L S QPALLYLVPSTLG ++ + +R +L++LW
Sbjct: 316 ALAAGVLTHSPQPALLYLVPSTLGPVIFMSWRRKDLAELWE 356
>AT2G03120.1 | chr2:937554-940083 FORWARD LENGTH=345
Length = 344
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 350 WVGQDLMGICMMILVLQVVHLPNIKVATALLVSAFMYDIFWVFISPFIFKKSVMITVARG 409
W+ +++G+ I ++++ L + K LL F YDIFWVF +P VM++VA+
Sbjct: 161 WLANNILGLSFCIQGIEMLSLGSFKTGAILLAGLFFYDIFWVFFTP------VMVSVAKS 214
Query: 410 SDEGPSLPMVLKMPKEFDTWNGYDMIGFGDILFPGLLVAFSFRYDRANGKDLTDGYFLCL 469
D P+ L P D Y M+G GDI+ PG+ VA + R+D + + YF
Sbjct: 215 FDA----PIKLLFPTG-DALRPYSMLGLGDIVIPGIFVALALRFDVSRRRQ--PQYFTSA 267
Query: 470 MIGYAFGLSCTYVGLYLMKSGQPALLYLVPSTLGTIVTLGAKRGELSQL 518
IGYA G+ T V + ++ QPALLY+VP+ +G + + G++ L
Sbjct: 268 FIGYAVGVILTIVVMNWFQAAQPALLYIVPAVIGFLASHCIWNGDIKPL 316
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,830,447
Number of extensions: 448214
Number of successful extensions: 928
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 916
Number of HSP's successfully gapped: 6
Length of query: 523
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 420
Effective length of database: 8,282,721
Effective search space: 3478742820
Effective search space used: 3478742820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)