BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0332400 Os06g0332400|AK101738
(683 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0332400 VHS domain containing protein 1121 0.0
Os02g0273700 VHS domain containing protein 559 e-159
Os01g0229200 VHS domain containing protein 460 e-129
Os11g0199700 Similar to Seed protein B32E (Fragment) 325 8e-89
Os05g0475300 VHS domain containing protein 283 4e-76
Os01g0825700 Similar to VHS2 protein (Fragment) 265 9e-71
Os08g0109000 ENTH/VHS domain containing protein 188 1e-47
Os02g0697300 ENTH/VHS domain containing protein 124 2e-28
Os05g0339000 VHS domain containing protein 119 1e-26
Os10g0578000 Similar to hepatocyte growth factor-regulated ... 87 4e-17
>Os06g0332400 VHS domain containing protein
Length = 683
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/683 (83%), Positives = 570/683 (83%)
Query: 1 MPQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXX 60
MPQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQ
Sbjct: 1 MPQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQLLAL 60
Query: 61 XXXXXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRAR 120
IKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRAR
Sbjct: 61 TLLETLIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRAR 120
Query: 121 YPQYYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTP 180
YPQYYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTP
Sbjct: 121 YPQYYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTP 180
Query: 181 EVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNS 240
EVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNS
Sbjct: 181 EVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNS 240
Query: 241 TTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKSPSIKPEGAKQPD 300
TTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKSPSIKPEGAKQPD
Sbjct: 241 TTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKSPSIKPEGAKQPD 300
Query: 301 QRSSEAASTVTPFEQLXXXXXXXXXXXXXXXXXXVGPSIDLLSGDDYFKPEPVNSQALVS 360
QRSSEAASTVTPFEQL VGPSIDLLSGDDYFKPEPVNSQALVS
Sbjct: 301 QRSSEAASTVTPFEQLALPAPASSSSSKPPVEPAVGPSIDLLSGDDYFKPEPVNSQALVS 360
Query: 361 VGNPPAASANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLSEPQLYXXXXXXXXXXX 420
VGNPPAASANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLSEPQLY
Sbjct: 361 VGNPPAASANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLSEPQLYPSQQTVPPQQP 420
Query: 421 XXXXNGLTSNTMAPYDQPSDINATGSWNSQFAHGMXXXXXXXXXXXXXXXNYGQGQDQSG 480
NGLTSNTMAPYDQPSDINATGSWNSQFAHGM NYGQGQDQSG
Sbjct: 421 SPYSNGLTSNTMAPYDQPSDINATGSWNSQFAHGMLPPQLPPQLPPQQPPNYGQGQDQSG 480
Query: 481 DLPPPPWETQPAESDQFQPGQPRGLAMXXXXXXXXXXXXXXXXXXXXAPLQPMLTGQPTG 540
DLPPPPWETQPAESDQFQPGQPRGLAM APLQPMLTGQPTG
Sbjct: 481 DLPPPPWETQPAESDQFQPGQPRGLAMPSGQIGGIQSQPVQVQPGQVAPLQPMLTGQPTG 540
Query: 541 MQFQQGFGDQLGAQQTQPLHTQYGGMYPTMQGNQSAGMYPQQMAGDFXXXXXXXXXXXXX 600
MQFQQGFGDQLGAQQTQPLHTQYGGMYPTMQGNQSAGMYPQQMAGDF
Sbjct: 541 MQFQQGFGDQLGAQQTQPLHTQYGGMYPTMQGNQSAGMYPQQMAGDFYQQQMYGGQMAGY 600
Query: 601 XXXXXXXXXXXXXXXXXXXXXXELSQGMNGLAVQDNSLYGTSASSSFQQPMRPSRPEDSL 660
ELSQGMNGLAVQDNSLYGTSASSSFQQPMRPSRPEDSL
Sbjct: 601 GYGQQSGGYYAPNAAYGYGGANELSQGMNGLAVQDNSLYGTSASSSFQQPMRPSRPEDSL 660
Query: 661 FGDLVSIAKTKPSKTAANKAGGL 683
FGDLVSIAKTKPSKTAANKAGGL
Sbjct: 661 FGDLVSIAKTKPSKTAANKAGGL 683
>Os02g0273700 VHS domain containing protein
Length = 634
Score = 559 bits (1440), Expect = e-159, Method: Compositional matrix adjust.
Identities = 354/716 (49%), Positives = 407/716 (56%), Gaps = 120/716 (16%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
SVLVDRAT++ LIGPDW++NLEICD LN DP QAKDVVKSIKKRI H+N+K+Q
Sbjct: 3 SVLVDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRIAHRNAKVQLLALTLL 62
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
IKNCGD VHM VAE+DILHEMVKI KK+PD+HVKEKIL LIDTWQE FGG RARYPQ
Sbjct: 63 ETMIKNCGDIVHMQVAEKDILHEMVKIVKKRPDFHVKEKILTLIDTWQEVFGGVRARYPQ 122
Query: 124 YYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVP 183
YY AYQELLRAGAVFPQR + SVPI+TPPQTQPL+N P +LR+ Q+ P SS P++P
Sbjct: 123 YYAAYQELLRAGAVFPQRSNGSVPIFTPPQTQPLQNYPASLRSA---QQEPPGSSVPDLP 179
Query: 184 TLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTD 243
+LSL EIQNARG+MDVLSEMLNA+DP NREGLRQEVIVDLVDQCRSYKQRVV+LVN+T++
Sbjct: 180 SLSLAEIQNARGIMDVLSEMLNALDPSNREGLRQEVIVDLVDQCRSYKQRVVELVNTTSN 239
Query: 244 EELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKSPSIKPEGAKQPDQRS 303
EELLSQGLSLNDDLQRVLAKHDAIAAG+AVR+EK KS+Q + D SP P +K P Q S
Sbjct: 240 EELLSQGLSLNDDLQRVLAKHDAIAAGVAVRLEKTKSLQTKIDSSPPANPGTSKAPVQSS 299
Query: 304 SEAASTVTPFEQLXXXXXXXXXXXXXXXXXXVGPSIDLLSGDDYFKPEPVNSQALVSVGN 363
S AS Q P IDLLSGDDY KPEP NS ALV V
Sbjct: 300 SGTASASN---QSTLALPAPASSSSPKAPAAPVPVIDLLSGDDYIKPEPANSLALVPVTE 356
Query: 364 PPAASANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLSEP--QLY-XXXXXXXXXXX 420
AA N L L DMF Q+N + N +T+S S P+ + P Q Y
Sbjct: 357 YSAAD-QNVLALADMFEQNNANRS-NNNLTNSFNTSAPNSNFPASQAYPAPVQPALPQHP 414
Query: 421 XXXXNGLTSNTMAPYDQPSDINATGSWNSQFAHGMXXXXXXXXXXXXXXXNYGQGQDQSG 480
NG++SN + PY DQ+G
Sbjct: 415 VAYSNGVSSNAIVPYY---------------------------------------DDQNG 435
Query: 481 DLPPPPWETQPAESDQFQPGQPRGLAMXXXXXXXXXXXXXXXXXXXXAPLQPMLTGQPTG 540
LPPPPWE Q + + QP Q PLQP GQP G
Sbjct: 436 GLPPPPWEIQQSMDNPPQPTQ-----------------------LGQMPLQP---GQPVG 469
Query: 541 M--------QFQQG--------FGDQLGAQQTQPLHT---------QYGG--MYP-TMQG 572
M QF QG QLG TQP + QYGG MYP +MQ
Sbjct: 470 MHPQSPHSGQFGQGSFMSPQQMANGQLGG--TQPRQSPQPQSAPNLQYGGMMMYPNSMQV 527
Query: 573 NQSAGMYPQQM-AGDFXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXELSQG 627
NQ AGMY Q M G F EL+Q
Sbjct: 528 NQGAGMYSQPMFGGQFYGMSHHHQMYAVQMAGYGFGQQPGAYYIPNAAYAYVSANELTQR 587
Query: 628 MNGLAVQDNSLYGTSASSSFQQPMRPSRPEDSLFGDLVSIAKTKPSKTAANKAGGL 683
MN ++VQ+ + +G + + SRPEDSLFGDLVSIAK K +K AA K GGL
Sbjct: 588 MNAVSVQEGNSHGGAMA---------SRPEDSLFGDLVSIAKMKQNKPAAGKVGGL 634
>Os01g0229200 VHS domain containing protein
Length = 711
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 317/737 (43%), Positives = 391/737 (53%), Gaps = 97/737 (13%)
Query: 6 LVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXX 65
+VDRATS+ LIGPDW+ N+EICDI N DP Q+KDVVK++KKRIGHKN K+Q
Sbjct: 5 MVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALKKRIGHKNPKVQILALTLLET 64
Query: 66 XIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYY 125
IKNCGD HMHVAERD+LHEMVKI KKK D +VKEK+L +IDTWQEAFGG RARYPQYY
Sbjct: 65 AIKNCGDIFHMHVAERDVLHEMVKIVKKKSDQNVKEKVLTMIDTWQEAFGGPRARYPQYY 124
Query: 126 VAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVPTL 185
AY +L+RAGA FP+R D P++ Q+ RN +R+ ++Q EA ESS+ + P L
Sbjct: 125 AAYHDLVRAGAAFPKRSDRPAPLFN-GQSPAGRN----MRSPDQQDEA-ESSAGNDFPAL 178
Query: 186 SLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTDEE 245
S++EIQNARG+MDVL+EMLNA+DPGNREGLRQEVIV+LVDQCR+YKQRVV LVN+T DEE
Sbjct: 179 SMSEIQNARGIMDVLAEMLNALDPGNREGLRQEVIVELVDQCRTYKQRVVLLVNATADEE 238
Query: 246 LLSQGLSLNDDLQRVLAKHDAIAAGIAVRVE-KPKSVQARGDKSPSIKPEGAK------- 297
L+SQGL+LNDDLQRVLAKHDAIAAGIAVRVE KPKS+QA D S+ + K
Sbjct: 239 LMSQGLALNDDLQRVLAKHDAIAAGIAVRVEKKPKSLQALVDTEDSMNQDSKKEQALVDI 298
Query: 298 ------QPDQRSSEAASTVTPFEQLXX-XXXXXXXXXXXXXXXXVGPSIDLLSGDDYFKP 350
+ ++ S++AS +PFEQL +G +DLLS DD P
Sbjct: 299 EDPTTQETNKEPSQSASVQSPFEQLALPAPPVSNGSATPAPKSDLG--VDLLSWDD--NP 354
Query: 351 EPV-NSQALVSVGNPPAAS--ANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLSEPQ 407
NS ALV V +P S + N L +VD+F+Q+N NN +NS+ +L Q
Sbjct: 355 STTENSLALVPVTDPVVDSTPSQNALAIVDIFSQNNTTNNIAKPADPFGVNSSSTLPGSQ 414
Query: 408 LYXXXXXXXXXXXXXXXN-GLTSNTMAPYDQPSDINATGSWNSQFAHGMXXXXXXXXXXX 466
Y GL N A S ++G WN Q A+
Sbjct: 415 PYNAPTQHPLQAQQQPQQVGLYPNGGAVNPGTSYPTSSG-WNGQIANN-------ATPPA 466
Query: 467 XXXXNYGQGQDQSGDLPPPPWETQ----------------------------PAESDQFQ 498
NY +QSG LPPPPWE Q P S+Q
Sbjct: 467 QQTVNY---DEQSGALPPPPWEAQSAPSGDMSNGGMQSHPVSNGQFGGMPSLPTPSNQMG 523
Query: 499 PGQPRGLAMXXXXXXXXXXXXXXXXXXXXAPLQPMLTGQPTGMQFQQGFGDQLGAQQTQP 558
QP M P QP +T Q Q GF +Q G + P
Sbjct: 524 GMQPLHPQMNQMGGPQAHQMYNNQQPGAMQPSQPAVT------QMQSGFANQFG---SMP 574
Query: 559 LHTQYGGMYPTMQ-----GNQSAGMY--PQQMAG-DFXXXXX------XXXXXXXXXXXX 604
H+ G +P MQ G Q MY P M G F
Sbjct: 575 PHSMPGMQFPGMQPSPMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGPQMSQYRLVQQQA 634
Query: 605 XXXXXXXXXXXXXXXXXXELSQGMNGLAVQDNSLYGTSASSSFQQPM------RPSRPED 658
+LSQ M GL++QD+S G ++S P +PS+PED
Sbjct: 635 AQYYSNSQGRPTYYAGMNDLSQKMYGLSMQDSSYMGMNSSPYSTTPSSSSSMGQPSKPED 694
Query: 659 SLFGDLVSIAKTKPSKT 675
LFGDL+SIAKTK +K
Sbjct: 695 KLFGDLLSIAKTKQNKA 711
>Os11g0199700 Similar to Seed protein B32E (Fragment)
Length = 588
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 158/271 (58%), Positives = 198/271 (73%), Gaps = 4/271 (1%)
Query: 5 VLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXX 64
+RATS+ LIGPDW++N+E+CDI+N DP QAKD +K +KKR+G+KNSK+Q
Sbjct: 6 ACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTLKLLKKRLGNKNSKVQILTLYVLE 65
Query: 65 XXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQY 124
KNCGD V+ + ERDIL EMVKI KKKPD +V+EKIL LIDTWQ AFGG+ RYPQY
Sbjct: 66 TLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQY 125
Query: 125 YVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRN----LPPALRNTERQQEAPESSSTP 180
+ AYQEL AG FP R +++VP++TPPQTQPLR PP + +A SS P
Sbjct: 126 HAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDAAIQASLQSSAP 185
Query: 181 EVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNS 240
P LSL+EIQ+ARG++DVL EMLNA+D + EG+R+EVIVDLV QCRSY+ RV+ LV++
Sbjct: 186 SAPALSLSEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMDLVSN 245
Query: 241 TTDEELLSQGLSLNDDLQRVLAKHDAIAAGI 271
T DE LL Q L LND+LQRVL +HD IA G+
Sbjct: 246 TGDESLLFQALGLNDELQRVLQRHDDIAKGV 276
>Os05g0475300 VHS domain containing protein
Length = 625
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/283 (48%), Positives = 192/283 (67%), Gaps = 12/283 (4%)
Query: 1 MPQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXX 60
+P S VD+ATS L GPDW++NLEICD LN D Q KDVVK++KKR+ HK+ ++Q
Sbjct: 13 LPASTRVDKATSHLLQGPDWAINLEICDTLNADRWQTKDVVKAVKKRLQHKDPRVQFFTL 72
Query: 61 XXXXXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRAR 120
+KNCG++VH V E+ IL EMV+I +KK D V++K+LIL+D+WQEAFGG +
Sbjct: 73 TLLETMMKNCGEYVHFEVVEQHILQEMVRIVQKKHDTQVRDKVLILLDSWQEAFGGPGGK 132
Query: 121 YPQYYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLP----PALRNTERQQEAPES 176
YPQYY +Y EL R+G +FP+RP + PI+TPP T ++ PA ER
Sbjct: 133 YPQYYWSYIELKRSGIMFPRRPVDAPPIFTPPATHHTQSYGSPTYPAGSLNERM------ 186
Query: 177 SSTPEVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQ 236
T +V TLSL ++ N R ++L +M+NA++P +R ++ E+I +LV QCRS +Q++++
Sbjct: 187 --TSDVETLSLGDLNNIRDTTELLCDMVNALNPSDRMAVKDEIISELVTQCRSNQQKLMR 244
Query: 237 LVNSTTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPK 279
V+ST +EELL QGL +ND LQ VLAKHDAIA+G + VE P+
Sbjct: 245 FVSSTGNEELLKQGLEINDHLQSVLAKHDAIASGAPLPVETPR 287
>Os01g0825700 Similar to VHS2 protein (Fragment)
Length = 597
Score = 265 bits (677), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 193/290 (66%), Gaps = 5/290 (1%)
Query: 7 VDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXXX 66
V++ATS L+GPDW++NLEICDI+N D Q KDVVK++KKR+ +K+ K+Q
Sbjct: 22 VEKATSHLLMGPDWAVNLEICDIINADVWQTKDVVKAVKKRLQNKDPKVQFYALTLLETM 81
Query: 67 IKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYYV 126
+KNCG++V + VAE+ +L EMVKI +KK D V++KIL+L+D+WQEAFGG ++YPQY+
Sbjct: 82 MKNCGEYVQLEVAEQHVLQEMVKIIQKKNDMLVRDKILLLLDSWQEAFGGPGSKYPQYHF 141
Query: 127 AYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVPTLS 186
AY E+ R GAVFP+RP + PI+TPP T ++ E S +V TLS
Sbjct: 142 AYLEVKRIGAVFPRRPIDAPPIFTPPATHTSQSYGSPRYEAGSLNEIMSS----DVETLS 197
Query: 187 LTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTDEEL 246
L ++ N R V ++L +M++A++P + ++ E+I DLV QCRS +Q+++Q V+ST +E+L
Sbjct: 198 LGDLNNIRNVTELLCDMVHALNPSDHMAVKDEIITDLVSQCRSNQQKLMQFVSSTGNEQL 257
Query: 247 LSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKS-PSIKPEG 295
L QGL +ND LQ +++K+D +A+ + VE P + K P+ KP
Sbjct: 258 LKQGLEINDRLQNIISKYDIMASSTHLAVEAPPADNVEAPKEDPAEKPSA 307
>Os08g0109000 ENTH/VHS domain containing protein
Length = 401
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 157/269 (58%), Gaps = 11/269 (4%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
S +V ATSE L DW+ N+EIC+++ DP +AKDV+K IKK +G ++ Q
Sbjct: 3 SEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLL 62
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
+ NCG+ +H V + +L +VKI KKK + V+EKI +L+D Q + GG + ++PQ
Sbjct: 63 EMLMNNCGEPIHKQVIDNGLLPILVKIVKKKTELPVREKIFLLLDATQTSLGGVKGKFPQ 122
Query: 124 YYVAYQELLRAGAVFPQRPDSSV-----PIYTPPQTQPLRNLPPALRNTERQQEAPESSS 178
YY AY EL+ AG F RP+ V P+ P T N + R E Q+E
Sbjct: 123 YYGAYYELVSAGVQFSNRPNVVVTQAQAPVPVPEPTIEPNNNSLSRRLDEGQKEVHAQ-- 180
Query: 179 TPEVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLV 238
P + I+ A VM+VL ++L+++DP + EG E ++DLV+QC KQR++ LV
Sbjct: 181 ----PVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLV 236
Query: 239 NSTTDEELLSQGLSLNDDLQRVLAKHDAI 267
++ DE ++SQ + LN++L +VL +HDA+
Sbjct: 237 MTSRDEVVVSQAIELNEELHKVLVRHDAL 265
>Os02g0697300 ENTH/VHS domain containing protein
Length = 392
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 148/272 (54%), Gaps = 21/272 (7%)
Query: 2 PQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXX 61
P +V+ ATSE+L GPDWS NLEICD++N + + ++++ IKKRI K++++Q
Sbjct: 47 PADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLV 106
Query: 62 XXXXXIKNCGDFVHMHVAERDILHEMVKIAKK-KPDYHVKEKILILIDTWQEAFGGSRAR 120
+KNC AER +L EMV++ + + + K L+LI+ W E+ G R
Sbjct: 107 LLETIVKNCEKAFSEVAAER-VLDEMVRLIDDPQTVVNNRNKALMLIEAWGES--GDELR 163
Query: 121 Y-PQYYVAYQELLRAGAVFPQRPDSSV-PIYTPPQTQPLRNLPPALRNTERQQEAPESSS 178
Y P Y Y+ L G FP R + S+ PI+TP R++ A + Q+ E
Sbjct: 164 YLPVYEETYKSLKSRGVRFPGRDNESLAPIFTPA-----RSVAEAEVDANFSQQTFED-- 216
Query: 179 TPEVPTLSLTEIQN----ARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRV 234
+V T + E + AR +++LS +L++ ++ L+ ++ LV QC + +
Sbjct: 217 -VQVHTYTAEETKEAFDVARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTI 273
Query: 235 VQLVNSTTDEE-LLSQGLSLNDDLQRVLAKHD 265
+++ + D E +L + LS+ND++Q+VL+K++
Sbjct: 274 QRMIETAGDNEAMLFEALSVNDEIQKVLSKYE 305
>Os05g0339000 VHS domain containing protein
Length = 136
Score = 119 bits (297), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
+V VD+ATSE L+GPDW+LN++ICD +N D QAK+V+K++KKR+ HKNSK+Q
Sbjct: 5 AVRVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRLQHKNSKVQFFALTLL 64
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKK 94
+KNCGD VH V ERDIL EM+KI KKK
Sbjct: 65 ETLMKNCGDHVHSQVVERDILQEMIKIVKKK 95
>Os10g0578000 Similar to hepatocyte growth factor-regulated tyrosine kinase
substrate-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 6 LVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXX 65
+VD AT E++ PDW+ NLEICD++N + +++++IK+RI KN ++Q
Sbjct: 51 IVDEATLETMDAPDWATNLEICDMVNTGNVNSIELIRAIKRRIMLKNPRVQYLALVLLET 110
Query: 66 XIKNCGDFVHMHVAERDILHEMVKIAKK-KPDYHVKEKILILIDTWQEAFGGSRARY-PQ 123
+KNC AER +L EMVK+ + + + K L+LI+ W E+ G RY P
Sbjct: 111 VVKNCEKAFSEIAAER-VLDEMVKLIDDPQTVVNNRNKALMLIEAWGES--GDELRYLPV 167
Query: 124 YYVAYQELLRAGAVFPQRPD 143
Y Y+ L G FP R D
Sbjct: 168 YEETYKSLRSRGIRFPGRDD 187
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.311 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,723,008
Number of extensions: 794368
Number of successful extensions: 2443
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2426
Number of HSP's successfully gapped: 10
Length of query: 683
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 575
Effective length of database: 11,396,689
Effective search space: 6553096175
Effective search space used: 6553096175
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 159 (65.9 bits)