BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0275700 Os06g0275700|AK110058
(973 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0275700 U box domain containing protein 1910 0.0
Os02g0727300 U box domain containing protein 1185 0.0
Os12g0277400 U box domain containing protein 404 e-112
Os12g0277000 U box domain containing protein 315 1e-85
Os03g0657100 U box domain containing protein 307 3e-83
Os01g0948500 Armadillo-like helical domain containing protein 110 4e-24
Os01g0651900 79 2e-14
Os04g0455050 75 3e-13
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 72 2e-12
Os02g0732200 U box domain containing protein 70 6e-12
>Os06g0275700 U box domain containing protein
Length = 973
Score = 1910 bits (4947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 944/973 (97%), Positives = 944/973 (97%)
Query: 1 MELQRVQNSTVNVMHVMEYLAANVDLAKDLVMRCSAVARELKNDDLLGMTEDLDSVIKNI 60
MELQRVQNSTVNVMHVMEYLAANVDLAKDLVMRCSAVARELKNDDLLGMTEDLDSVIKNI
Sbjct: 1 MELQRVQNSTVNVMHVMEYLAANVDLAKDLVMRCSAVARELKNDDLLGMTEDLDSVIKNI 60
Query: 61 GHELSRIPASTFGSSRFPDGRADANLQIAGHRPRYCDQNSCDGYSEADMSIIPANSRPRR 120
GHELSRIPASTFGSSRFPDGRADANLQIAGHRPRYCDQNSCDGYSEADMSIIPANSRPRR
Sbjct: 61 GHELSRIPASTFGSSRFPDGRADANLQIAGHRPRYCDQNSCDGYSEADMSIIPANSRPRR 120
Query: 121 RTLHNSDMPRLVDFLQGMYHESHDIGAHSFNSLPEVAEYVEPLYDSFFCPLTNKVMVDPV 180
RTLHNSDMPRLVDFLQGMYHESHDIGAHSFNSLPEVAEYVEPLYDSFFCPLTNKVMVDPV
Sbjct: 121 RTLHNSDMPRLVDFLQGMYHESHDIGAHSFNSLPEVAEYVEPLYDSFFCPLTNKVMVDPV 180
Query: 181 TTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNEA 240
TTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNEA
Sbjct: 181 TTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNEA 240
Query: 241 TRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLI 300
TRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLI
Sbjct: 241 TRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLI 300
Query: 301 RCDSLDLLCLLAEDETGKEVIANTRAITRTIKLLSSNSPDERHAAIXXXXXXXXXXXXXX 360
RCDSLDLLCLLAEDETGKEVIANTRAITRTIKLLSSNSPDERHAAI
Sbjct: 301 RCDSLDLLCLLAEDETGKEVIANTRAITRTIKLLSSNSPDERHAAISFLLELSKSELLLE 360
Query: 361 NIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLV 420
NIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLV
Sbjct: 361 NIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLV 420
Query: 421 EGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHSGNTVIRKAALDVLVQISSD 480
EGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHSGNTVIRKAALDVLVQISSD
Sbjct: 421 EGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHSGNTVIRKAALDVLVQISSD 480
Query: 481 GPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGH 540
GPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGH
Sbjct: 481 GPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGH 540
Query: 541 VITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEF 600
VITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEF
Sbjct: 541 VITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEF 600
Query: 601 MGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGRVTERHAVAAT 660
MGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGRVTERHAVAAT
Sbjct: 601 MGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGRVTERHAVAAT 660
Query: 661 LLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRVSRHAKTYMEGLVGALVRMTMT 720
LLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRVSRHAKTYMEGLVGALVRMTMT
Sbjct: 661 LLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRVSRHAKTYMEGLVGALVRMTMT 720
Query: 721 LYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLSQPPSEEQRR 780
LYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLSQPPSEEQRR
Sbjct: 721 LYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLSQPPSEEQRR 780
Query: 781 PKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCXXXXXXXXXXX 840
PKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFC
Sbjct: 781 PKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCLAEAGAVEALV 840
Query: 841 XXXXSNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTA 900
SNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTA
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTA 900
Query: 901 GAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHR 960
GAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHR
Sbjct: 901 GAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHR 960
Query: 961 MPDYSATYVSVEL 973
MPDYSATYVSVEL
Sbjct: 961 MPDYSATYVSVEL 973
>Os02g0727300 U box domain containing protein
Length = 973
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/979 (61%), Positives = 734/979 (74%), Gaps = 33/979 (3%)
Query: 1 MELQRVQNSTVNVMHVMEYLAANVDLAKDLVMRCSAVARELKNDDLLGMTEDLDSVIKNI 60
ME Q + + +V + E+ A V+LAK+L RC A A +L +D++L +T+DL+SVI+N+
Sbjct: 22 MERQTARRTPSSVTQMPEFPPACVNLAKELTARCRARALQLTDDEILSITQDLESVIENL 81
Query: 61 GHELSRIPASTFGSSRFPDGRADANLQIAGHRPRYCDQNSCDGYSEADMSIIPANSRPRR 120
+ R+P S GS+ + DG A S G+ E DM NS P R
Sbjct: 82 CDYIGRVPTSALGSNAYTDGAVKAL--------------SVRGFLEDDMLTNAVNSMPNR 127
Query: 121 RTLHNSDMPRLVDFLQGMYHESHDIGAHSFNSLPEVAEYVEPLYDSFFCPLTNKVMVDPV 180
+ H+S+MPRLV+FLQGMYHES + G H F+SLPEV+EY+EPLYD+ FCPLTN+VM DPV
Sbjct: 128 KYFHDSNMPRLVEFLQGMYHESDEFGGHLFSSLPEVSEYIEPLYDALFCPLTNQVMTDPV 187
Query: 181 TTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNEA 240
TESGVTY+R+AIEE+FE+FAD SE V+CPVTKM +QSK L +N LKS IAEW MRNEA
Sbjct: 188 LTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLKSVIAEWTMRNEA 247
Query: 241 TRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLI 300
R+RIARTALS++STEAM+LEAI ELK LAK+R KNREQMHKIG+T+ L RLL++ + I
Sbjct: 248 MRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLLDNHNVQI 307
Query: 301 RCDSLDLLCLLAEDETGKEVIANTRAITRTIKLLSSNSPDERHAAIXXXXXXXXXXXXXX 360
R +L+LLC L EDE GK++I T+AI RTIKLLS+N DERHAAI
Sbjct: 308 RHSALELLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISFLLELSKSQLLLE 367
Query: 361 NIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLV 420
+IGST+GSIL+LTTM+ NDSDDP+AA+KAGEVLKNLE C KNIKYMAESGYL+PLQ HLV
Sbjct: 368 DIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLEPLQSHLV 427
Query: 421 EGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHSGNTVIRKAALDVLVQISSD 480
EGSE++QMEMV YL EL+Q+QE+TI+I GS S +LIKMVHS NTV RKAALDVLVQ+SS
Sbjct: 428 EGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNTVARKAALDVLVQLSSH 487
Query: 481 GPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGH 540
PNSKTLV+AG VPVMVEELFIRK+DDEP+ K AAAVLAN+VESG+DPD VVNKEGH
Sbjct: 488 RPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNTVVNKEGH 547
Query: 541 VITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEF 600
V+TSKYS+YNF HMLKC MPD+LNLSIIRVLLALTA K L VVSV++E +++E
Sbjct: 548 VLTSKYSIYNFVHMLKCFMPDELNLSIIRVLLALTAHAKALAAVVSVVRENHRGHSIVEL 607
Query: 601 MGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGR--VTERHAVA 658
M S TEALG+++TRLLI LS MGHTIAE+LCK GQP RLV+SI + GR +TERHA A
Sbjct: 608 MSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAITERHAAA 667
Query: 659 ATLLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRV--SRHAKTYMEGLVGALVR 716
TLL+RLPY+N++LNLAL+++GAVP +L IEEM G R+ SRHA YMEGLVG LVR
Sbjct: 668 VTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEGLVGTLVR 727
Query: 717 MTMTLYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLS--QPP 774
+T TLY+PDVL AAMDH+F +VLT LL +AGS EVQRLAAVGLENLS+ S+ LS PP
Sbjct: 728 LTATLYNPDVLKAAMDHDFASVLTALLAGAAGSGEVQRLAAVGLENLSYHSIKLSRPPPP 787
Query: 775 SEEQRRPKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCXXXXX 834
E++ RPKK IL+RL+DA RVH+++ PP +CPVHRGVC+PATTFC
Sbjct: 788 PEDEPRPKKMTILKRLKDA---RVHNHSSSKNPPL---NVCPVHRGVCTPATTFC-LLEA 840
Query: 835 XXXXXXXXXXSNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRD 894
N++ RVVDA LGALCTL+DD VDVE+ V LA AAR VL ALRQHR
Sbjct: 841 GAVEGLLACLENDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHR- 899
Query: 895 VGGDTAGAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESV 954
++ RCF VE+ L HG + CVR+VT DR LP+ALVSAFH+GDA KQ AES+
Sbjct: 900 -----GNSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESI 954
Query: 955 LRSLHRMPDYSATYVSVEL 973
LR LH+MPDYSATY+SVE
Sbjct: 955 LRRLHKMPDYSATYMSVEF 973
>Os12g0277400 U box domain containing protein
Length = 806
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/825 (32%), Positives = 445/825 (53%), Gaps = 58/825 (7%)
Query: 160 VEPLYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSK 219
VEP+Y+SF CPL+ +VM DPVT ESG T++R+AI ++F+ G +VCPVT + S
Sbjct: 18 VEPIYESFLCPLSKQVMRDPVTIESGATFEREAILKWFKDNGSGGRRLVCPVTNKELSST 77
Query: 220 ALRSNVPLKSTIAEWIMRNEATRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQ 279
L ++ L++TI EW+ RNEA ++ +AR +L+ +E +L+A++ + + + R +R
Sbjct: 78 ELNPSIALRNTIDEWMHRNEAAKLDVARKSLTSDCSEGDILQALEYVAEICQRSRSSRHL 137
Query: 280 MHKIGITKFLPRLLEHKDGLIRCDSLDLLCLLAE-DETGKEVIANTRAITRTIKLLSSNS 338
+ K+G+ + LL++ +R +L L +A+ D K IA I +K L+
Sbjct: 138 VRKVGLISLITDLLKNSSPKVRQKALGSLRFVAKNDNDNKNEIAAGDNIRTIVKFLNHGH 197
Query: 339 PDERHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLEN 398
E+ A+ IGS SG+IL+L + + ++ + ++A + L+NLE+
Sbjct: 198 SQEKEQAVSLLYELSEYKPLSEKIGSVSGAILILVGLSSSKVENLLTVDRAEKTLENLES 257
Query: 399 CPKNIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKM 458
C KN++ MAE+G L PL R L+EGS D Q+ M ++LGELV ++ + +A +A L+ +
Sbjct: 258 CEKNVRQMAENGRLQPLLRLLLEGSSDTQLSMAAHLGELVLSNDVKVLVAQTAGSTLVNI 317
Query: 459 VHSGNTVIRKAALDVLVQISSDGPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAA 518
+ SGN R+AAL L QISS ++K L++AG +P ++ +LF + PM K +A
Sbjct: 318 MKSGNREAREAALKALNQISSYDTSAKILIEAGILPPLITDLFTVGSNQLPMRLKEVSAT 377
Query: 519 VLANIVESGLDPDTIVVNKEGHVITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALP 578
+LANIV SG +++ ++ + S+ V+N H++ + P + +++VL+ LT
Sbjct: 378 ILANIVASGASFESVPLDHNRQNLVSEEIVHNLLHLISNTGP-AIECKLLQVLVGLTTSA 436
Query: 579 KPLMTVVSVMKEQDSSLTVIEFMGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQP 638
+ ++V +K +++++I+F+ + + +++ +LL +SP MG +AE Q
Sbjct: 437 TTVQSIVDAIKSSGATVSLIQFVEAPQREVRLASIKLLNNISPFMGQELAEAFRGNFSQL 496
Query: 639 GRLVKSIGQPGRVTERHAVAATLLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMR 698
LV+ I ++E A AA L+A LP ++ L LL+ GA T++ K+ +++G++R
Sbjct: 497 SSLVRVIADNNGISEEQAAAAGLIADLPPRDSVLTRRLLQDGAFSTIITKVTMVRQGDIR 556
Query: 699 VSRHAKTYMEGLVGALVRMTMTLYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAV 758
R ++EGLV + R+T L D D++ A D+N T + TDLL + G D VQ ++A
Sbjct: 557 GGRFVNPFLEGLVRVVSRITFILDDLDIIDVARDYNLTPLFTDLL-QMNGLDTVQIVSAT 615
Query: 759 GLENLSHQSVNLSQPPSEEQRRPKKKNILRRLRDAHTGRVHDNNRKPPPPP--------- 809
LENLS QS +L R+ P P P
Sbjct: 616 ALENLSRQS-----------------KLLTRI-------------VPAPNPGFCFSIFPC 645
Query: 810 ------AQGRLCPVHRGVCSPATTFCXXXXXXXXXXXXXXXSNENGRVVDAVLGALCTLM 863
A G C VH G+CS +FC N N +VV+A L AL TL+
Sbjct: 646 LSQKSVATGA-CRVHVGICSARESFCLLEGKAVEKLVACLDHN-NEKVVEAALAALSTLL 703
Query: 864 DDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTAGAVSRRCFWAVERFLAHGGERCV 923
+D VD+E+GV VL + + +L L ++R+ A+ +R WAVER L +
Sbjct: 704 EDGVDIEQGVMVLCDAEGVNPILEVLCENRN------EALRQRAVWAVERILRI--DEIA 755
Query: 924 RDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHRMPDYSATY 968
+++ ++ + +ALV AF GD+ T+Q+AE L+ + ++P++S +
Sbjct: 756 YEISGNQNVGTALVEAFRHGDSRTRQIAERALKHVDKLPNFSGIF 800
>Os12g0277000 U box domain containing protein
Length = 843
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 225/805 (27%), Positives = 398/805 (49%), Gaps = 31/805 (3%)
Query: 163 LYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALR 222
+ +F CP+T +VM DPV E+G ++R+AI +F + A CPVT + ++
Sbjct: 43 VLSAFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVK 102
Query: 223 SNVPLKSTIAEWIMRNEATRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHK 282
V L++ I EW R E +R A L+ A++E L + + K+ R + + +
Sbjct: 103 PVVALRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRR 162
Query: 283 IGITKFLPRLLEHKDGLIRCDSLDLLCLLA-EDETGKEVIANTRAITRTIKLLSSNSPDE 341
G+ + +L + +R +L L A ED+ ++ ++ I R +K + E
Sbjct: 163 DGMVPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQE 222
Query: 342 RHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPK 401
R A+ I +G+IL+L + + S +P AE+A L+NLE C K
Sbjct: 223 RELAVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEK 282
Query: 402 NIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHS 461
N+ MAE+G L+PL L+EGS + Q+ + S L ++V ++ +A + +V +
Sbjct: 283 NVLQMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVEN 342
Query: 462 GNTVIRKAALDVLVQISSDGPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLA 521
G ++ A VL IS++ ++K L++ G + + L + + P + AAAVL+
Sbjct: 343 GTLPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLS 402
Query: 522 NIVESGLDPDTIVVNKEGHVITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPL 581
N+V G+D T+ ++ I S+ V++ H++ + P + ++ + + L++ +
Sbjct: 403 NLVACGIDFGTVPLDG-NRTIVSEDIVHSLLHLISNTSP-PIQCKLLEIFVMLSSSTTTV 460
Query: 582 MTVVSVMKEQDSSLTVIEFMGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRL 641
++++S ++ + +++F+ S + ++ +LL +S M H IA+ L +P G L
Sbjct: 461 LSIISAIRSSGAITNLVQFVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCL 520
Query: 642 VKSIGQPGRVTERHAVAATLLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRVSR 701
V+ + + + A +LA LP ++ L + L+EQGA + K+ + R +
Sbjct: 521 VRIVSENDANADEQDAALQILANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNI 580
Query: 702 HAKTYMEGLVGALVRMTMTLY-DPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGL 760
T +EGLV L R+T L +P + A ++N ++ T LL R G D VQ L+A L
Sbjct: 581 VDNTMLEGLVKVLARITYILREEPRCVALAREYNLASLFTSLL-RLNGLDGVQLLSAKAL 639
Query: 761 ENLSHQSVNLSQPPSEEQRRPKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRG 820
NLS +S ++ P+ ++ K + +KPP +LC VH G
Sbjct: 640 VNLSVESRYMTGTPNFDEHEQKSG-------------LTWFGKKPPGI----QLCRVHSG 682
Query: 821 VCSPATTFCXXXXXXXXXXXXXXXSNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD 880
+CS FC S++N +VV+A L ALCTL+ D V++ GV+VL +
Sbjct: 683 ICSIRDNFC-ILEGKAVERLVVCLSHQNKKVVEASLAALCTLLGDGVEITEGVSVLYMAN 741
Query: 881 AARHVLRALRQHRDVGGDTAGAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAF 940
A + L+ G+ G + +R WAVER L E + ++DR L SALV AF
Sbjct: 742 AVEPIFEILK------GNPTGTLQQRVTWAVERILR--AENIAKAASSDRGLSSALVHAF 793
Query: 941 HKGDAATKQVAESVLRSLHRMPDYS 965
GD+ T+++AE+ L+ ++++P +S
Sbjct: 794 QNGDSRTRRIAEASLKHINKLPTFS 818
>Os03g0657100 U box domain containing protein
Length = 824
Score = 307 bits (786), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 256/836 (30%), Positives = 404/836 (48%), Gaps = 52/836 (6%)
Query: 161 EPLYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKA 220
E +++F CPLT +VM DPVT E+G T++R+AI ++F + D CP+T+ ++
Sbjct: 12 EGAFEAFVCPLTKQVMRDPVTIETGQTFEREAILKWFRECRDNGRRPTCPLTQRELRDTE 71
Query: 221 LRSNVPLKSTIAEWIMRNEATRVRIARTAL-----SMASTEAMLLEAIQELKLLAKIRRK 275
+ +V L+S I EW RNE + A +L A E A++ L +++I ++
Sbjct: 72 VSPSVALRSVIHEWRARNEEKDLDRACASLVGGFAGHAGDEEEEESALRALVHVSQICQR 131
Query: 276 N---REQMHKIGITKFLPRLLEHKDGLIRCDSLDLLCLLAED-ETGKEVIANTRAITRTI 331
+ ++ + + G+ + + +L+ +R SL +L +L ED + KE + I I
Sbjct: 132 SAASKDLVRRRGVLRAVAEMLKSGSRRLRLKSLQVLRVLVEDNDDNKEELGKGDTIRTII 191
Query: 332 KLLSSNSPDERHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKFNDSDDPVAAEKAGE 391
K LS+ ER A+ IG+ G+IL+L M + S+ VA +KA
Sbjct: 192 KFLSNEHVQERELAVSLLHELSGHEPTCERIGAVYGAILLLVGMGSSKSESAVAVDKAES 251
Query: 392 VLKNLENCPKNIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGELVQKQEMTINIAGSA 451
L+NL+ N+K MA++G L PL L+ G D ++ M YLGEL + +A A
Sbjct: 252 TLRNLDRFDANVKQMADNGRLQPLLTRLLRGEPDTRVAMADYLGELALANDDKAAVAEQA 311
Query: 452 SEILIKMVHSGNTVIRKAALDVLVQISSDGPNSKTLVD-AGAVPVMVEELFIRKIDDEPM 510
+L+ M+ +G T ++A L L +ISS ++K L+ AG +P +V ++ PM
Sbjct: 312 GPLLVGMLRTGATPAKEATLKALREISSSEASAKLLLQRAGVLPPLVNDVLF-STGHLPM 370
Query: 511 GSKTEAAAVLANIVESGLDPDTI------------VVNKEGHVITSKYSVYNFTHMLKCS 558
K AA +LAN+V SG D +I + S+ V++ H++ +
Sbjct: 371 KLKELAATILANLVASGADFRSIPLDDDEDDDGGGGGRGRRRTLLSEDVVHSQLHLISNT 430
Query: 559 MPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEFMGSKTEALGISATRLLIA 618
P + ++ VL LT+ + VV+ +K +++++I+F+ + + + + +LL
Sbjct: 431 GP-AIGCRLLSVLAGLTSSRATVADVVAAVKSSGATISLIQFIEAAHRDIRVESLKLLRN 489
Query: 619 LSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGRVTERHAVAATLLARLPYQNITLNLALLE 678
L+P MG +A+ L + R + S G G VTE A A LL LP + +L L +
Sbjct: 490 LAPYMGAELADALGGSLSSLLRAISSDG--GGVTEEQAAAVGLLGDLPEGDSSLTRQLFD 547
Query: 679 QGAVPTLLAKIEEMQRGEMR-VSRHAKTYMEGLVGALVRMTMTL-YDPDVLLAAMDHNFT 736
GA L K+ E++RG +R +R+ EG+V + R+T L D + + A +
Sbjct: 548 LGAFRALAPKLAELRRGTIRGGNRYVTPLTEGVVKVMYRVTCALEEDAEYVEFAREAGLA 607
Query: 737 AVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLSQPPSEEQRRPKKKNILRRLRDAHTG 796
+ +LL + G D VQ +A+ LE LS QS +L+ P+ A G
Sbjct: 608 PLFVELL-HTNGMDTVQLYSAMALEKLSLQSSHLTAIPAPPSPPAG-------FGCACLG 659
Query: 797 RVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCXXXXXXXXXXXXXXXSNE--NGRVVDA 854
R P C VH G CS TFC + +GRVV+A
Sbjct: 660 RRPAAAAVPAGV------CRVHGGFCSLRETFCLAQADGGKAVERLVACLDHLDGRVVEA 713
Query: 855 VLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTAGAVSRRCFWAVERF 914
L AL TL+ D VD GV VL E D R V+ + + R A+ RR WAVER
Sbjct: 714 ALAALSTLVCDGVDAREGVVVLGEADGLRPVVDIMVESR------TEALQRRAVWAVERI 767
Query: 915 LAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHRMPDYSATYVS 970
L E +V AD+ + SALV A+ GD T+Q AE LR L R+P++SA + S
Sbjct: 768 LRV--EEIAGEVAADQTVASALVEAYRNGDPRTRQTAERALRHLDRIPNFSAAFQS 821
>Os01g0948500 Armadillo-like helical domain containing protein
Length = 672
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 158/652 (24%), Positives = 276/652 (42%), Gaps = 67/652 (10%)
Query: 318 KEVIANTRAITRTIKLLSSNSPDERHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKF 377
KE +A+ A++ ++ LS + DE AI IG GSI+ML T++
Sbjct: 87 KERLASIEALSSIVRSLSRDV-DETREAIALLLDLSDIPQVRQRIGRIKGSIVMLVTLR- 144
Query: 378 NDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGEL 437
++ +P + A ++L L + P+N+ MAE+GY PL +L EGS+ ++ M + + ++
Sbjct: 145 -NAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAISKM 203
Query: 438 VQKQEMTINIA-GSASEILIKMVHSGNTVIRKAALDVLVQISSDGPNSKTLVDAGAVPVM 496
+ M ++ A E L++M SGN + +AL L+ +SS N++ L+++G +
Sbjct: 204 FLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHSALGALLNLSSSLQNAEILINSGITGPL 263
Query: 497 VEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGHVITSKYSVYNFTHMLK 556
++ LF + M + A+A+LA I +S + I+++K+ V S+ N + +
Sbjct: 264 LQLLF--SVTSVLMTLREPASAILAAIAQS----ERILLHKD--VAPQMLSLLNLSSPV- 314
Query: 557 CSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEFMGSKTEALGISATRLL 616
+ L ++R L +++ + + L ++ F+ K + I+A +
Sbjct: 315 ------IQLHLLRALNSISGHTNAKRARAKIRQNGGVQL-LLPFLTEKNIDIKIAALNFI 367
Query: 617 IALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGRVTERHAVAATLLARLPYQNITLNLAL 676
LS +AE++ VK I P E+ A A +L+ LP + + L
Sbjct: 368 SNLSKDASQELAEQIRDT--HLNIFVKIISSPTSGNEK-AAAIGILSNLPVTDKKITELL 424
Query: 677 LEQGAVPTLLAKIEEMQRGEMRVSRHAKTYMEGLVGALVRMTMTLYDPDVLLAAMDHNFT 736
E +P L++ +E + R + +EG+ G L+R T+ +D + A+ H
Sbjct: 425 TEANLLPLLISLLEINITAPLTPLR--TSLLEGIAGVLIRFTVP-WDKKLQSLAVGHGVV 481
Query: 737 AVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLSQPPSEEQRRPKKKNILRRLRDAHTG 796
L LL S GS + + AA L LS S+ L +K + R L A
Sbjct: 482 PCLVKLL--SEGSIKAKSKAATSLAQLSQNSLAL-----------RKTKLPRWLCVA--- 525
Query: 797 RVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCXXXXXXXXXXXXXXXSNENGRVVDAVL 856
P+ C VH C+ +TFC ++N AVL
Sbjct: 526 ------------PSAETYCLVHNSQCTVKSTFC-LVKAGAVSPLIQILEDDNREADGAVL 572
Query: 857 GALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRDVGGDTAGAVSRRCFWAVERFLA 916
AL TLM D + E G V+ + +LR + G T+ + W +ER
Sbjct: 573 EALATLMQDEI-WENGSKVIEKASGVHALLRI----AEAGNSTS---QEKAIWMLERIFR 624
Query: 917 HGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESVLRSLHRMPDYSATY 968
R A + L+ KGD K + +L L + S+ +
Sbjct: 625 LEAHRERYGEIAQ----ALLIDLAQKGDPILKPMIGKILAHLELLQTQSSYF 672
>Os01g0651900
Length = 190
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 496 MVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGHVITSK 545
MVEEL+IRK+DDE + K AAAVLAN+VES +DPDT VVNKEGHV+TSK
Sbjct: 1 MVEELYIRKVDDEALPYKAMAAAVLANVVESSIDPDTTVVNKEGHVLTSK 50
>Os04g0455050
Length = 87
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 473 VLVQISSDGPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDT 532
+L+++ S PNSKTLV+ V MVEEL+IRK+DDE + K AAAV AN+VES +DPDT
Sbjct: 1 MLIELFSHRPNSKTLVEVVPV--MVEELYIRKVDDEALRYKAMAAAVPANVVESSIDPDT 58
Query: 533 IVVNKEGHVITSK 545
VVNKEGHV+TSK
Sbjct: 59 TVVNKEGHVLTSK 71
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 146/358 (40%), Gaps = 30/358 (8%)
Query: 165 DSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSN 224
D F CP++ ++M DPV SG TY+R I+++ + S CP T+ + +L N
Sbjct: 230 DEFRCPISLELMQDPVIVSSGQTYERSCIQKWLD-----SGHKTCPKTQQPLSHTSLTPN 284
Query: 225 VPLKSTIAEWIMRN------EATRVRIARTALSMASTEAMLLE---------------AI 263
LKS I++W N R + A S A L+ A
Sbjct: 285 FVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAA 344
Query: 264 QELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLIRCDSLDLLCLLAEDETGKEVIAN 323
E++LLAK NR + + G L LL D + ++ L L+ E K I +
Sbjct: 345 GEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVD 404
Query: 324 TRAITRTIKLLSSNSPDERHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKFNDSDDP 383
+ AI + +++L + S + R A IG+ +G+I L + + S P
Sbjct: 405 SHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGA-AGAIPPLINLLCDGS--P 461
Query: 384 VAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGELVQKQEM 443
+ A + NL N ++G + L LV+ + + E +S L L E
Sbjct: 462 RGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEG 521
Query: 444 TINIAGSAS-EILIKMVHSGNTVIRKAALDVLVQISSDGPNSKTLVDAGAVPVMVEEL 500
I IA S L++++ +G+ R+ A +L + S A V ++EL
Sbjct: 522 KIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKEL 579
>Os02g0732200 U box domain containing protein
Length = 637
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 27/333 (8%)
Query: 165 DSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSN 224
+ F CP++ ++M DPV +G TY+R I+ + + G+ CP T++ +Q+ L N
Sbjct: 264 EDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDC---GNR--TCPKTQLKLQNITLTPN 318
Query: 225 VPLKSTIAEWI----------MRNEATRV-----RIARTALSMASTEAMLLE---AIQEL 266
L+S I +W +N+ + R+A L + + L E A E+
Sbjct: 319 YVLRSLILQWCEEKGIEPPTRSKNDGAYLEVGGERVAIETLVRNLSSSSLDERKSAAAEI 378
Query: 267 KLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLIRCDSLDLLCLLAEDETGKEVIANTRA 326
+ LAK NR + + G L +LL KD + ++ L L+ + KE+I A
Sbjct: 379 RSLAKKSTDNRILLAESGAISALVKLLSSKDLKTQEHAVTALLNLSIYDQNKELIVVAGA 438
Query: 327 ITRTIKLLSSNSPDERHAAIXXXXXXXXXXXXXXNIGSTSGSILMLTTMKFNDSDDPVAA 386
I I++L + R A IGST G+I L ++ S P
Sbjct: 439 IVPIIQVLRKGGMEARENAAAAIFSLSLIDDNKITIGSTPGAIEAL--VELLQSGSPRGR 496
Query: 387 EKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLVEGSEDVQM-EMVSYLGELVQKQEMTI 445
+ A L NL N +G L PL + L + S + + E ++ L LV E I
Sbjct: 497 KDAATALFNLCIYQANKVRAVRAGILAPLIQMLQDSSRNGAIDEALTILSVLVSHHECKI 556
Query: 446 NIAGS-ASEILIKMVHSGNTVIRKAALDVLVQI 477
IA + A LI ++ S ++ A +L+ +
Sbjct: 557 AIAKAHAIPFLIDLLRSSQARNKENAAAILLAL 589
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 30,740,323
Number of extensions: 1281009
Number of successful extensions: 4760
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 4740
Number of HSP's successfully gapped: 13
Length of query: 973
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 863
Effective length of database: 11,292,261
Effective search space: 9745221243
Effective search space used: 9745221243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)