BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0161800 Os06g0161800|AK064664
(274 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0161800 Protein of unknown function DUF569 family protein 524 e-149
Os06g0161900 Protein of unknown function DUF569 family protein 188 4e-48
Os06g0161100 155 3e-38
Os08g0163900 Protein of unknown function DUF569 family protein 74 1e-13
Os10g0358900 70 2e-12
Os08g0164300 Protein of unknown function DUF569 family protein 69 3e-12
Os08g0164000 Protein of unknown function DUF569 family protein 65 6e-11
Os08g0164400 65 6e-11
>Os06g0161800 Protein of unknown function DUF569 family protein
Length = 274
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/274 (95%), Positives = 262/274 (95%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATARAAWAVHVLHHFDGRMLMLH 60
MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATARAAWAVHVLHHFDGRMLMLH
Sbjct: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATARAAWAVHVLHHFDGRMLMLH 60
Query: 61 SAANGRYLXXXXXXXXXXXXRFGLGGGNRVTLRDLDRLPMFAAGWFPIVSASGDVLLGHA 120
SAANGRYL RFGLGGGNRVTLRDLDRLPMFAAGWFPIVSASGDVLLGHA
Sbjct: 61 SAANGRYLAATTSPWAATAARFGLGGGNRVTLRDLDRLPMFAAGWFPIVSASGDVLLGHA 120
Query: 121 SDRFLRAIDRGDGNGVTVEVSDSRRPNTPWVVEAIPPIESIPRLPHLVGIGHIARAIRFV 180
SDRFLRAIDRGDGNGVTVEVSDSRRPNTPWVVEAIPPIESIPRLPHLVGIGHIARAIRFV
Sbjct: 121 SDRFLRAIDRGDGNGVTVEVSDSRRPNTPWVVEAIPPIESIPRLPHLVGIGHIARAIRFV 180
Query: 181 RAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIMCVRAGLFGRLTPL 240
RAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIMCVRAGLFGRLTPL
Sbjct: 181 RAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIMCVRAGLFGRLTPL 240
Query: 241 ITDLPPNNVTMEIIVVTAGTIDANELRFPNVGAV 274
ITDLPPNNVTMEIIVVTAGTIDANELRFPNVGAV
Sbjct: 241 ITDLPPNNVTMEIIVVTAGTIDANELRFPNVGAV 274
>Os06g0161900 Protein of unknown function DUF569 family protein
Length = 273
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/287 (47%), Positives = 156/287 (54%), Gaps = 27/287 (9%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATARAAWAVHVLHHF---DGRML 57
ME+F D HHVWLRSR G YL AD DG V + RA+ AAW VH HH D +L
Sbjct: 1 MEQFHDGHHVWLRSRAQGTYLRAD-DDGRGVSMGQGRASVHAAWTVHT-HHLNAGDVDIL 58
Query: 58 MLHSAANGRYLXXXXXXXXXXXXRFGLGGGNR--VTLRDLDRLPMFAAGWFPIVSASGD- 114
MLHSAANGRYL R L GNR + LRDLD+ A WF I S GD
Sbjct: 59 MLHSAANGRYLATGLGWT-----RRRLLSGNRASIILRDLDQEVFPPACWFAIRSGWGDD 113
Query: 115 VLLGHASDRFLRAIDRG-----DGNGVTVEVSDSRR-PNTPWVVEAIPPIESIPRLPHLV 168
VLL H S RFLRA DR +G GV ++ D RR WVVEAIPP SIPR P+
Sbjct: 114 VLLRHCSWRFLRADDRKWNWNRNGTGVIADMIDGRRLARWQWVVEAIPPRNSIPRPPNPS 173
Query: 169 -GIGHIARAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIM 227
G AR I F R T + W FTGRS +L +L+RR+ F + M
Sbjct: 174 PSFGFFARRIIFRRL-------THNDLQWVWIWFTGRSALHLWNQLSRRMGFEPDPNSTM 226
Query: 228 CVRAGLFGRLTPLITDLPPNNVTMEIIVVTAGTIDANELRFPNVGAV 274
CVRAG +GRLTPL+TDLP NN TM I V+ ++ L PNV A
Sbjct: 227 CVRAGTYGRLTPLVTDLPRNNATMVIFVLPPESLAGLGLTCPNVHAA 273
>Os06g0161100
Length = 360
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 145/270 (53%), Gaps = 30/270 (11%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATARAAWAVHVLHHFDGRMLMLH 60
ME+F DR HV LRSR HG YLHAD DG V L P A+ A W VH+ R L+LH
Sbjct: 1 MEQFHDRDHVRLRSRVHGTYLHAD-EDGRGVSLQPTGASLTAVWTVHLEGGSPQRRLLLH 59
Query: 61 SAANGRYLXXXXXXXXXXXXRFGLGG--GNRVTLRDLDRLPMFAAGWFPIVSASGD-VLL 117
SAA GRYL + G G G+RV L +LDRL + W + +A GD VLL
Sbjct: 60 SAAYGRYLAATG--------KPGPSGLRGHRVALINLDRLDDESVSWEAVRTAKGDDVLL 111
Query: 118 GHASDRFLRAIDRGDGNGVTVEVSDSRRPNTPWV---VEAIPPIESIPRLPHLV--GIGH 172
HA+ R LRA G G TV+ SR WV VEAIP +S+PR P + G
Sbjct: 112 RHATGRNLRA---NHGAGATVDDRYSRM--LLWVDQVVEAIPSADSVPRPPPISRRQDGP 166
Query: 173 IARAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIMCVRAG 232
R IRFV A + +GT W F+FTGRS+ L+ E+ R A CV+AG
Sbjct: 167 EIRTIRFVPA---APNGTIAE-DWRTFQFTGRSVQRLKEEITSRAGEATQ----YCVQAG 218
Query: 233 LFGRLTPLITDLPPNNVTMEIIVVTAGTID 262
+GRL PL +LP N T++II++ GT D
Sbjct: 219 RYGRLIPLTHELPHNTETIDIIIMMTGTTD 248
>Os08g0163900 Protein of unknown function DUF569 family protein
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 110 SASGDVLLGHASDRFLRAIDR--GDGNGVTVEVSDSRRPNTPWVVEAIPPIESIPRLPHL 167
A G VLL S R+LR ++V+ + W V +PP E +P LP
Sbjct: 165 DARGVVLLRDRSGRYLRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSEDMPELPIA 224
Query: 168 VGIGHIARAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELARRLNFAVVSDVIM 227
R I+FV + A D WA + GRS+ LR ++A + + D M
Sbjct: 225 T---QPLREIQFV--DEADLDNISEGENWATVQIRGRSVRLLREKIAELVGY---DDFTM 276
Query: 228 CVRAGLFGRLTPLITDLPPNNVTMEIIVVTAGTIDANELRFPNVGAV 274
CV AG G+ TPL+ DLP T++I++V T ++L FPN A+
Sbjct: 277 CVSAGRHGQFTPLLIDLPRRRETLQIVLVRPNTESYDQLIFPNPNAL 323
>Os10g0358900
Length = 537
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 112/284 (39%), Gaps = 35/284 (12%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRA----TARAAWAVH--VLHHFDG 54
ME F+ LR G +LHAD DG SVY R A WAV V
Sbjct: 1 MEVFRGVEFAALRLWPCGSFLHAD-EDGRSVYHGSVRDGDAWLPNAVWAVEELVAGASHT 59
Query: 55 RMLMLHSAANGRYLXXXXXXXXXXXXRFGLG---------GGNRVTLRDLDRLPMFAAGW 105
R ++L A GRYL + RD D W
Sbjct: 60 RYVLLR-GAYGRYLGAGAPDARDRDQERCACPLPSCPLPCCSLQAAQRDRDDAEPDDIMW 118
Query: 106 FPIVSASGD-----VLLGHASDRFLRA----IDRGDGNGVTVEVSDSRRPNTPWVVEAIP 156
PI + D VLL S R+LR + R G V V + + V +P
Sbjct: 119 RPIGCSGTDIAGSVVLLQDRSGRYLRGNQGFLSRHHGVSVDVNIGNEMTLRWEVVRVRVP 178
Query: 157 PIESIPRLPHLVGIGHIARAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELARR 216
P +PHL + R I+FV + A G + FTGRS+ LR +L RR
Sbjct: 179 TRPERPIVPHLPCWPLLNREIQFVTVDDADNFG------FGSVRFTGRSVDLLREDLMRR 232
Query: 217 LNFAVVSDVIMCVRAGLFGRLTPLITDLPPNNVTMEIIVVTAGT 260
+ + D MCVRAG GRLTPL DLP + T+ I+++ T
Sbjct: 233 IGY---DDFTMCVRAGRHGRLTPLFIDLPHSRETLCIVLIRPNT 273
>Os08g0164300 Protein of unknown function DUF569 family protein
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 124/298 (41%), Gaps = 41/298 (13%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHP--YRATARAAWAVHV-LHHFDGRML 57
M+ F V LR+ Y+ AD DG SVY + R + A WAV + +
Sbjct: 53 MQVFHGAQFVRLRNLWEETYITAD-EDGRSVYHYDPGRRPSHEAIWAVQLAVAGEPPTQY 111
Query: 58 MLHSAANGRYLXXXXXXXXXXXXRFGLGG---GNRVTLRDLDRLPMFAAGWFPIVSASGD 114
+L A GRYL R+ L V RD D+ + A W +
Sbjct: 112 VLLRGAYGRYLGAPDAVER----RWPLSCCCPAPVVGQRDFDQPVVDAIMWRAVRRTGHV 167
Query: 115 VLLGHASDRFLRAIDRGD---GNGVTVEVSDSRRPNTP----WVVEAIPPIESIPRLPHL 167
V L S R+LR G ++ V D R + W V + P P LP +
Sbjct: 168 VCLHDKSGRYLRGKLMSTLVCGGRPSLTVGDGRLSDDEKELRWEVRPVLPSPGRPELP-I 226
Query: 168 VGIGHIA------------RAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELAR 215
+A R I+FV + DG ++ W F++ GRS+ LR EL
Sbjct: 227 ATEADLAELFVKICFPPRRREIQFV-----APDGDG-NIVWDSFQYQGRSVQLLRNELEN 280
Query: 216 RLNFAVVSDVIMCVRAGLFGRLTPLITDLPPNNVTMEIIVVTAGTIDANELRFPNVGA 273
R+ +A+ MCVRAG GRLTPL+ +LP + T+ I+ + + + L FP+ A
Sbjct: 281 RVGYAIT----MCVRAGRHGRLTPLLINLPHSRETLHIVALRRNSEADHRLTFPDPDA 334
>Os08g0164000 Protein of unknown function DUF569 family protein
Length = 546
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 150 WVVEAIPPIESIPRLPHLVGIGHIARA--------IRFVRAERASTDGTFPHVAWACFEF 201
W V +PP +P LP G RA I+FV + A D T W E
Sbjct: 405 WEVVRVPPSGDMPGLPIATQPGFFVRACFPQPLREIQFV--DEADLDNTSEGEIWTTVEI 462
Query: 202 TGRSLFNLRTELARRLNFAVVSDVIMCVRAGLFGRLTPLITDLPPNNVTMEIIVVTAGTI 261
GRS+ LR ++A + + D MCV AG G+ TPL+ DLP + T+ I+++ +
Sbjct: 463 RGRSVRLLREKIAELVGY---DDFTMCVSAGRHGQFTPLLIDLPRSRETLNIVLLRTNSE 519
Query: 262 DANELRFPNVGAV 274
+++ FPN A+
Sbjct: 520 ANDQMIFPNPNAL 532
>Os08g0164400
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 1 MERFQDRHHVWLRSREHGLYLHADLADGSSVYLHPYRATA------RAAWAVH-VLHHFD 53
ME FQ V LR YLHAD +G SVY R + A WAV V+
Sbjct: 1 MEVFQGVEFVALRVWCCNSYLHAD-ENGRSVYHGNLRGGSGGGSLHNAVWAVEEVVAGVP 59
Query: 54 GRMLMLHSAANGRYLXXXXXXXXXXXXRFGLGGGNRVTLRDLDRLPMFAAGWFPIVSASG 113
+L A GRYL L R D D L + A W + +
Sbjct: 60 PTRYVLLRGAYGRYLGSPDAPDREREGCCSLEAAQR----DRDVLDVGAIMWRAVGCSGP 115
Query: 114 D------VLLGHASDRFLRAIDR--GDGNGVTVEVSDSRRPNTPWVVEAIPPIESIPRLP 165
D VLL S R+LR GV+V + W V + P + P LP
Sbjct: 116 DLARGCVVLLHDKSGRYLRGNQTFLARRPGVSVHSDVDNETSLRWEVVRVTPSQVRPELP 175
Query: 166 ---------HLVGIGH--IARAIRFVRAERASTDGTFPHVAWACFEFTGRSLFNLRTELA 214
+LV + R I+FV A + A FTG+S+ LR +LA
Sbjct: 176 IATECNLTKNLVAACFPPLRRQIQFVTAGAGA--------AGNIDVFTGKSVQLLREKLA 227
Query: 215 RRLNFAVVSDVIMCVRAGLFGRLTPLITDLPPNNVTMEIIVV 256
L + + +CVRAG+ GRLTPL+ DLP + T+ I++V
Sbjct: 228 GILGY---DEFTLCVRAGIHGRLTPLLIDLPRSRETLHIVLV 266
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.141 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,692,981
Number of extensions: 394548
Number of successful extensions: 1035
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1018
Number of HSP's successfully gapped: 8
Length of query: 274
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 175
Effective length of database: 11,866,615
Effective search space: 2076657625
Effective search space used: 2076657625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 155 (64.3 bits)