Os06g0161900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF569 family protein.
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Os06g0161900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF569 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.9 | 0.592 | 5.1 | 1.45 | 2.07 | -2.41 | -1.69 | -6.43 | 0.577 | 23.3 | 24.78 | 4415 | -- | -- |
| 187.64 | 0.638 | 5.31 | 0.317 | 2.01 | -1.67 | -1.71 | -- | 0.38 | 23.3 | 73.36 | 3517 | -- | -- |
| 171.04 | 0.609 | 5.1 | 1.48 | 2.08 | -2.4 | -- | -6.32 | 0.573 | 23.3 | 24.74 | 4455 | -- | -- |
| 199.81 | 0.658 | 5.3 | 0.458 | 2.04 | -1.52 | -- | -- | 0.382 | 23.3 | 79.54 | 2881 | -- | -- |
| 404.69 | 0.937 | 5.11 | 1.6 | -- | -2.49 | -- | -5.87 | 0.494 | -- | 29.5 | 2373 | -- | -- |
| 235.02 | 0.719 | 5.24 | 1.02 | 2.11 | -- | -1.66 | -- | 0.69 | 23.4 | -- | -- | -- | -- |
| 246.79 | 0.736 | 5.23 | 1.09 | 2.11 | -- | -- | -- | 0.695 | 23.5 | -- | -- | -- | -- |
| 386.3 | 0.915 | 5.31 | 0.363 | -- | -3 | -- | -- | 0.167 | -- | 30.9 | 871 | -- | -- |
| 203.9 | 0.665 | 5.32 | -- | 2.03 | -1.81 | -- | -- | 0.312 | 23.5 | 124.9 | 5109 | -- | -- |
| 527.07 | 1.07 | 5.18 | 1.14 | -- | -- | -- | -- | 0.718 | -- | -- | -- | -- | -- |
| 278.02 | 0.78 | 5.26 | -- | 2.13 | -- | -- | -- | 0.574 | 23.5 | -- | -- | -- | -- |
| 388.33 | 0.918 | 5.32 | -- | -- | -3.09 | -- | -- | 0.128 | -- | 31.44 | 892 | -- | -- |
| 561.64 | 1.11 | 5.21 | -- | -- | -- | -- | -- | 0.591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 2 | 148.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 25 | 149.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 27 | 149.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 9 |
| 181 | 151.11 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 281 | 152.11 | temperature | 25 | 4320 | < th | dose dependent | sin | 10 | NA |
| 324 | 152.50 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 717 | 155.70 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 821 | 156.32 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 956 | 157.17 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |