Os08g0164000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF569 family protein.
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Os08g0164000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF569 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.29 | 0.577 | 2.97 | 1.71 | 0.158 | 12.9 | 0.316 | -79.2 | 0.0254 | 4.85 | 995 | 1442 | -- | -- |
| 156.22 | 0.587 | 3.24 | 0.136 | 0.187 | -0.352 | 0.429 | -- | 0.0169 | 5.01 | 995 | 1442 | -- | -- |
| 153.54 | 0.577 | 2.97 | 1.7 | 0.159 | 12.8 | -- | -79.1 | 0.0237 | 4.59 | 995 | 1463 | -- | -- |
| 153.64 | 0.577 | 3.23 | 0.133 | 0.151 | -0.705 | -- | -- | 0.0488 | 4.72 | 996.3 | 1603 | -- | -- |
| 154.87 | 0.58 | 2.95 | 1.82 | -- | 13.7 | -- | -84.2 | 0.0317 | -- | 995.4 | 1301 | -- | -- |
| 156.46 | 0.586 | 3.24 | 0.14 | 0.181 | -- | 0.406 | -- | 0.0154 | 4.98 | -- | -- | -- | -- |
| 156.87 | 0.587 | 3.24 | 0.138 | 0.183 | -- | -- | -- | 0.0133 | 4.71 | -- | -- | -- | -- |
| 154.97 | 0.58 | 3.24 | 0.112 | -- | -0.837 | -- | -- | 0.0314 | -- | 996.2 | 1351 | -- | -- |
| 153.77 | 0.578 | 3.24 | -- | 0.17 | -0.821 | -- | -- | 0.0152 | 4.64 | 996.3 | 1420 | -- | -- |
| 158.65 | 0.589 | 3.24 | 0.145 | -- | -- | -- | -- | 0.0181 | -- | -- | -- | -- | -- |
| 157.38 | 0.587 | 3.24 | -- | 0.186 | -- | -- | -- | -0.00208 | 4.69 | -- | -- | -- | -- |
| 155.29 | 0.58 | 3.24 | -- | -- | -0.855 | -- | -- | 0.0196 | -- | 996.3 | 1350 | -- | -- |
| 159.21 | 0.589 | 3.24 | -- | -- | -- | -- | -- | 0.00199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 2 | 145.01 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 9 | 145.01 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 24 | 145.30 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 32 | 146.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 37 | 146.23 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 42 | 147.04 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 43 | 147.22 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 45 | 147.81 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 50 | 148.36 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 52 | 148.72 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 65 | 148.88 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 69 | 149.00 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 83 | 149.16 | wind | 1.0 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 87 | 149.17 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 160 | 149.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 163 | 149.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 167 | 149.39 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 177 | 149.39 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 178 | 149.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 198 | 149.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 201 | 149.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 249 | 149.62 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 255 | 149.67 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 280 | 149.81 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 283 | 149.83 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 286 | 149.86 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 334 | 150.06 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 347 | 150.14 | wind | 1.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 350 | 150.16 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 361 | 150.24 | wind | 3.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 373 | 150.32 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 426 | 150.59 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 4 |
| 450 | 150.66 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 462 | 150.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 479 | 150.80 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 505 | 150.86 | wind | 1.0 | 10 | < th | dose independent | sin | 22 | NA |
| 506 | 150.86 | wind | 1.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 507 | 150.86 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 516 | 150.90 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 529 | 150.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 530 | 150.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 534 | 150.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 539 | 150.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 540 | 150.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 542 | 150.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 547 | 150.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 554 | 150.96 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 559 | 151.00 | wind | 1.0 | 10 | > th | dose independent | sin | 22 | NA |
| 569 | 151.06 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 571 | 151.07 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 582 | 151.10 | wind | 5.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 588 | 151.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 596 | 151.15 | wind | 7.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 600 | 151.16 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 20 |
| 602 | 151.17 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 604 | 151.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 606 | 151.17 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 607 | 151.17 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 610 | 151.17 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 612 | 151.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 614 | 151.17 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 619 | 151.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 1 |
| 620 | 151.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 621 | 151.17 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 626 | 151.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 627 | 151.18 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 634 | 151.22 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 637 | 151.24 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 638 | 151.24 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 639 | 151.25 | wind | 7.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 641 | 151.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 651 | 151.28 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 657 | 151.31 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 14 |
| 658 | 151.31 | wind | 1.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 659 | 151.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 667 | 151.33 | wind | 3.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 676 | 151.35 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 677 | 151.35 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 692 | 151.38 | wind | 5.0 | 30 | < th | dose dependent | rect. | 24 | 4 |
| 733 | 151.43 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 737 | 151.44 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 752 | 151.46 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 763 | 151.49 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 776 | 151.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 797 | 151.56 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 804 | 151.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 807 | 151.57 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 811 | 151.57 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 817 | 151.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 818 | 151.57 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 838 | 151.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 841 | 151.57 | wind | 7.0 | 10 | < th | dose dependent | rect. | 12 | 9 |
| 856 | 151.60 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 865 | 151.62 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 873 | 151.65 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 874 | 151.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 4 |
| 877 | 151.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 888 | 151.71 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 911 | 151.78 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 919 | 151.79 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 10 |
| 932 | 151.82 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 947 | 151.84 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 16 |
| 950 | 151.85 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 961 | 151.87 | wind | 9.0 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 1000 | 151.96 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 20 |