BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0142400 Os06g0142400|J065033J24
         (115 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0142400  Early nodulin                                       194   9e-51
Os06g0142200  Early nodulin                                       193   2e-50
Os06g0141700  Similar to Early nodulin                            184   8e-48
Os06g0142300  Early nodulin 93 ENOD93 protein family protein      184   2e-47
Os06g0141600  Early nodulin 93 ENOD93 protein family protein      152   5e-38
Os06g0141400  Similar to Early nodulin                             69   6e-13

>Os06g0142400 Early nodulin
          Length = 115

 Score =  194 bits (494), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 97/115 (84%), Positives = 97/115 (84%)

Query: 1   MATVTRAHLEQRLALAKRCSREXXXXXXXXXXXXXXXXXXPTLASVRMLPWAKANINPTG 60
           MATVTRAHLEQRLALAKRCSRE                  PTLASVRMLPWAKANINPTG
Sbjct: 1   MATVTRAHLEQRLALAKRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115



>Os06g0142200 Early nodulin
          Length = 115

 Score =  193 bits (490), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/115 (83%), Positives = 96/115 (83%)

Query: 1   MATVTRAHLEQRLALAKRCSREXXXXXXXXXXXXXXXXXXPTLASVRMLPWAKANINPTG 60
           MATVTRAHLEQRLALAKRCSRE                  PTLASVRMLPWAKANINPTG
Sbjct: 1   MATVTRAHLEQRLALAKRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQG GRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGTGRPHPAFFRP 115



>Os06g0141700 Similar to Early nodulin
          Length = 115

 Score =  184 bits (468), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 91/115 (79%), Positives = 95/115 (82%)

Query: 1   MATVTRAHLEQRLALAKRCSREXXXXXXXXXXXXXXXXXXPTLASVRMLPWAKANINPTG 60
           M+TVTRA+L+Q+LALAKRCSRE                  PTLASVRMLPWAKANINPTG
Sbjct: 1   MSTVTRAYLDQKLALAKRCSREATLAGAKAAAVATVASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQG G PHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGTGHPHPAFFRP 115



>Os06g0142300 Early nodulin 93 ENOD93 protein family protein
          Length = 115

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/115 (78%), Positives = 95/115 (82%)

Query: 1   MATVTRAHLEQRLALAKRCSREXXXXXXXXXXXXXXXXXXPTLASVRMLPWAKANINPTG 60
           M+TVTRA+L+Q+LALAKRCSRE                  PTLASVRMLPWAKANINPTG
Sbjct: 1   MSTVTRAYLDQKLALAKRCSREATLAGAKAAAVATVASAVPTLASVRMLPWAKANINPTG 60

Query: 61  QALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSFQGAGRPHPAFFRP 115
           QALIICTAAGMAYFVAADKKILSLAR+HSFE APEHLKNTSFQG GRPHPAFFRP
Sbjct: 61  QALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKNTSFQGTGRPHPAFFRP 115



>Os06g0141600 Early nodulin 93 ENOD93 protein family protein
          Length = 139

 Score =  152 bits (384), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/73 (97%), Positives = 72/73 (98%)

Query: 43  LASVRMLPWAKANINPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSF 102
           LASVRM+PWAKANINPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSF
Sbjct: 67  LASVRMVPWAKANINPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKNTSF 126

Query: 103 QGAGRPHPAFFRP 115
           QG GRPHPAFFRP
Sbjct: 127 QGTGRPHPAFFRP 139



>Os06g0141400 Similar to Early nodulin
          Length = 119

 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 41  PTLASVRMLPWAKANI-NPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKN 99
           PT ASVRM  WAKAN+ NP  + +II  AAGMAYF+A +KK++ L+R+HS E A    K+
Sbjct: 52  PTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKS 111



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.131    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,153,287
Number of extensions: 93961
Number of successful extensions: 210
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 205
Number of HSP's successfully gapped: 6
Length of query: 115
Length of database: 17,035,801
Length adjustment: 82
Effective length of query: 33
Effective length of database: 12,754,253
Effective search space: 420890349
Effective search space used: 420890349
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)