Os06g0141400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Early nodulin.
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Os06g0141400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Early nodulin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 295.92 | 0.808 | 2.43 | 3.27 | 0.327 | 41.7 | 0.101 | -257 | 1.66 | 9.01 | 995 | 669 | -- | -- |
| 302.81 | 0.817 | 2.95 | 0.165 | 0.321 | -0.484 | 0.134 | -- | 1.65 | 8.54 | 995 | 669 | -- | -- |
| 295.2 | 0.8 | 2.43 | 3.28 | 0.296 | 41.6 | -- | -256 | 1.63 | 9.03 | 994.9 | 670 | -- | -- |
| 298.92 | 0.805 | 2.95 | 0.141 | 0.324 | -0.71 | -- | -- | 1.65 | 8.85 | 994.7 | 1832 | -- | -- |
| 301.16 | 0.808 | 2.44 | 3.31 | -- | 41.6 | -- | -256 | 1.66 | -- | 994.9 | 668 | -- | -- |
| 303.27 | 0.816 | 2.95 | 0.172 | 0.315 | -- | 0.102 | -- | 1.65 | 8.66 | -- | -- | -- | -- |
| 303.3 | 0.816 | 2.95 | 0.176 | 0.314 | -- | -- | -- | 1.65 | 8.77 | -- | -- | -- | -- |
| 304.75 | 0.813 | 2.96 | 0.142 | -- | -0.691 | -- | -- | 1.66 | -- | 994.7 | 1719 | -- | -- |
| 299.43 | 0.806 | 2.95 | -- | 0.32 | -0.732 | -- | -- | 1.64 | 8.93 | 994.7 | 1770 | -- | -- |
| 308.9 | 0.821 | 2.96 | 0.176 | -- | -- | -- | -- | 1.65 | -- | -- | -- | -- | -- |
| 304.11 | 0.816 | 2.96 | -- | 0.315 | -- | -- | -- | 1.63 | 8.73 | -- | -- | -- | -- |
| 305.28 | 0.814 | 2.96 | -- | -- | -0.711 | -- | -- | 1.65 | -- | 994.7 | 1740 | -- | -- |
| 309.72 | 0.821 | 2.97 | -- | -- | -- | -- | -- | 1.63 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 286.20 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 2 | 286.32 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 3 | 286.32 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 4 | 286.39 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 5 | 286.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 9 | 286.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 13 | 286.39 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 18 | 286.39 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 19 | 286.39 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 20 | 286.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 23 | 286.60 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 25 | 286.70 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 27 | 286.78 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 28 | 286.83 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 31 | 286.96 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 34 | 287.04 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 52 | 287.10 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 54 | 287.10 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 55 | 287.11 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 56 | 287.11 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 64 | 287.19 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 80 | 287.27 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 87 | 287.55 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 90 | 287.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 92 | 287.55 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 93 | 287.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 96 | 287.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 97 | 287.55 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 98 | 287.55 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 101 | 287.55 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 102 | 287.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 103 | 287.55 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 105 | 287.61 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 106 | 287.61 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 110 | 287.71 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 112 | 287.77 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 113 | 287.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 124 | 287.94 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 144 | 288.01 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 150 | 288.09 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 163 | 288.30 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 183 | 288.45 | temperature | 30.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 191 | 288.49 | temperature | 30.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 261 | 288.81 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 285 | 288.87 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 286 | 288.87 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 372 | 288.87 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 458 | 288.95 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 5 |
| 534 | 289.04 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 616 | 289.15 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 629 | 289.17 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 633 | 289.18 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 664 | 289.31 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 667 | 289.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 668 | 289.32 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 687 | 289.34 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 690 | 289.35 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 773 | 289.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 811 | 289.66 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 819 | 289.73 | wind | 3.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 856 | 289.79 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 858 | 289.79 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 881 | 289.85 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 884 | 289.87 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 887 | 289.91 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 890 | 289.92 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 891 | 289.92 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 900 | 289.95 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 913 | 290.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 916 | 290.05 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 917 | 290.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 920 | 290.05 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 921 | 290.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 926 | 290.06 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 928 | 290.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 930 | 290.06 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 932 | 290.06 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 935 | 290.06 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 938 | 290.06 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 939 | 290.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 940 | 290.06 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 944 | 290.08 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 945 | 290.09 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 946 | 290.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 954 | 290.15 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 957 | 290.19 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 968 | 290.23 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 977 | 290.28 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 982 | 290.31 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 984 | 290.31 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 11 |