BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0141400 Os06g0141400|AK121184
         (119 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0141400  Similar to Early nodulin                            235   5e-63
Os06g0142200  Early nodulin                                        79   7e-16
Os06g0142400  Early nodulin                                        79   7e-16
Os06g0142300  Early nodulin 93 ENOD93 protein family protein       71   2e-13
Os06g0141700  Similar to Early nodulin                             69   5e-13
Os06g0141600  Early nodulin 93 ENOD93 protein family protein       67   4e-12

>Os06g0141400 Similar to Early nodulin
          Length = 119

 Score =  235 bits (600), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/119 (100%), Positives = 119/119 (100%)

Query: 1   AIESNPSPAGATKYCGIAILICWTLRLRRSISEAAIAGLKAAAVTAVCTAIPTFASVRMS 60
           AIESNPSPAGATKYCGIAILICWTLRLRRSISEAAIAGLKAAAVTAVCTAIPTFASVRMS
Sbjct: 1   AIESNPSPAGATKYCGIAILICWTLRLRRSISEAAIAGLKAAAVTAVCTAIPTFASVRMS 60

Query: 61  KWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKSEYTLTKSN 119
           KWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKSEYTLTKSN
Sbjct: 61  KWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKSEYTLTKSN 119



>Os06g0142200 Early nodulin
          Length = 115

 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 28  RRSISEAAIAGLKAAAVTAVCTAIPTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFI 87
           +R   EA IAG+KAAAV  + +A+PT ASVRM  WAKAN+ NP  + +II  AAGMAYF+
Sbjct: 17  KRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANI-NPTGQALIICTAAGMAYFV 75

Query: 88  AGEKKVVELSRKHSLEAAKARAKS 111
           A +KK++ L+R+HS E A    K+
Sbjct: 76  AADKKILSLARRHSFENAPEHLKN 99



>Os06g0142400 Early nodulin
          Length = 115

 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 28  RRSISEAAIAGLKAAAVTAVCTAIPTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFI 87
           +R   EA IAG+KAAAV  + +A+PT ASVRM  WAKAN+ NP  + +II  AAGMAYF+
Sbjct: 17  KRCSREANIAGVKAAAVATIASAVPTLASVRMLPWAKANI-NPTGQALIICTAAGMAYFV 75

Query: 88  AGEKKVVELSRKHSLEAAKARAKS 111
           A +KK++ L+R+HS E A    K+
Sbjct: 76  AADKKILSLARRHSFENAPEHLKN 99



>Os06g0142300 Early nodulin 93 ENOD93 protein family protein
          Length = 115

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 52  PTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKS 111
           PT ASVRM  WAKAN+ NP  + +II  AAGMAYF+A +KK++ L+RKHS E A    K+
Sbjct: 41  PTLASVRMLPWAKANI-NPTGQALIICTAAGMAYFVAADKKILSLARKHSFEGAPEHLKN 99



>Os06g0141700 Similar to Early nodulin
          Length = 115

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 52  PTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHSLEAAKARAKS 111
           PT ASVRM  WAKAN+ NP  + +II  AAGMAYF+A +KK++ L+R+HS E A    K+
Sbjct: 41  PTLASVRMLPWAKANI-NPTGQALIICTAAGMAYFVAADKKILSLARRHSFENAPEHLKN 99



>Os06g0141600 Early nodulin 93 ENOD93 protein family protein
          Length = 139

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 42  AAVTAVCTAIPTFASVRMSKWAKANLGNPVAKTVIITYAAGMAYFIAGEKKVVELSRKHS 101
           AA   VC      ASVRM  WAKAN+ NP  + +II  AAGMAYF+A +KK++ L+R+HS
Sbjct: 56  AAYACVCCLF-QLASVRMVPWAKANI-NPTGQALIICTAAGMAYFVAADKKILSLARRHS 113

Query: 102 LEAAKARAKS 111
            E A    K+
Sbjct: 114 FENAPEHLKN 123



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.125    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,436,416
Number of extensions: 106279
Number of successful extensions: 391
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 387
Number of HSP's successfully gapped: 6
Length of query: 119
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 34
Effective length of database: 12,597,611
Effective search space: 428318774
Effective search space used: 428318774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)