BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0594200 Os05g0594200|AK069021
(453 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0594200 Similar to Cation/proton exchanger 1a 766 0.0
Os01g0557500 Cation/proton exchanger 1a 495 e-140
Os02g0314100 Calcium/proton exchanger family protein 380 e-105
Os03g0397400 Similar to Low affinity calcium transporter CA... 300 1e-81
Os04g0653200 Similar to Low affinity calcium transporter CA... 285 6e-77
AK072134 213 3e-55
Os02g0138900 Sodium/calcium exchanger membrane region domai... 85 1e-16
>Os05g0594200 Similar to Cation/proton exchanger 1a
Length = 453
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/453 (88%), Positives = 399/453 (88%)
Query: 1 MPVSRMMMESNTMAKEMAVRHHLLPGSPRRRTAHNXXXXXXXXXXXXXXXHKVPCAALRS 60
MPVSRMMMESNTMAKEMAVRHHLLPGSPRRRTAHN HKVPCAALRS
Sbjct: 1 MPVSRMMMESNTMAKEMAVRHHLLPGSPRRRTAHNLSSSSLRKSSDASLLHKVPCAALRS 60
Query: 61 LLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIA 120
LLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIA
Sbjct: 61 LLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIA 120
Query: 121 FYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCXXXXXXXXXXXXXXXXXXXXXX 180
FYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKC
Sbjct: 121 FYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAG 180
Query: 181 IANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACS 240
IANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACS
Sbjct: 181 IANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACS 240
Query: 241 ILMLIAYLAYLFFQLNTHRQLFEPQQVEXXXXXXLVIAQDDEPVLGFSSAMIWXXXXXXX 300
ILMLIAYLAYLFFQLNTHRQLFEPQQVE LVIAQDDEPVLGFSSAMIW
Sbjct: 241 ILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDDDLVIAQDDEPVLGFSSAMIWLALMTLL 300
Query: 301 XXXXSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSL 360
SGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSL
Sbjct: 301 TALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSL 360
Query: 361 GSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLI 420
GSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLI
Sbjct: 361 GSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLI 420
Query: 421 LVLCYAVISVCFFVIRRRSAGGTDGVHHLDVIV 453
LVLCYAVISVCFFVIRRRSAGGTDGVHHLDVIV
Sbjct: 421 LVLCYAVISVCFFVIRRRSAGGTDGVHHLDVIV 453
>Os01g0557500 Cation/proton exchanger 1a
Length = 451
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/440 (60%), Positives = 308/440 (70%), Gaps = 10/440 (2%)
Query: 14 AKEMAVRHHLLPGSPRRRTAHNXXXXXXXXXXXXXXXHKVPCAALRSLLANLNDVLLTTR 73
+++A RH R RTAHN KVP A LR LLANL +V L T+
Sbjct: 10 GRKLAARHP----HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATK 65
Query: 74 LFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNA 133
L +LFPAV LAIAA F QVWVF LSL+GL+PLAER+SFLTEQIA YTGPTVGGLLNA
Sbjct: 66 LAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNA 125
Query: 134 TFGNVTEVIIALLALREGKIEVVKCXXXXXXXXXXXXXXXXXXXXXXIANLRAHQPYDTK 193
T GN TE+IIAL AL +GKIEVVKC + NL A QPYD
Sbjct: 126 TCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRN 185
Query: 194 QAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAA--LHLSRACSILMLIAYLAYL 251
Q+ V+TALL LAVLCHS PL+LRYAV +G+H++ + AA L LSRACS +ML +Y+AYL
Sbjct: 186 QSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYL 245
Query: 252 FFQLNTHRQLFEPQQVEXXXXXXLVIAQDDEPVLGFSSAMIWXXXXXXXXXXXSGYVVST 311
FFQL THRQLFEPQ+V+ D+EP LGF+SA+ W S YVV T
Sbjct: 246 FFQLKTHRQLFEPQEVDGGD----AGDDDEEPALGFASALFWLALMTAVISVLSEYVVGT 301
Query: 312 IEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVV 371
IE S+SW LSVSFISIILLPIVGNAAEHAGA+IFALKNK+DITLGV+LGSATQISMFVV
Sbjct: 302 IEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVV 361
Query: 372 PVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVC 431
P+SV+VAW MG+ MDLDF LLETGSLF+A+LVTAFTLQ+G SHYLKG++L+LCY VI C
Sbjct: 362 PLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGAC 421
Query: 432 FFVIRRRSAGGTDGVHHLDV 451
FFV R+ + LDV
Sbjct: 422 FFVARQPAGHANSNGALLDV 441
>Os02g0314100 Calcium/proton exchanger family protein
Length = 450
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/383 (53%), Positives = 258/383 (67%), Gaps = 7/383 (1%)
Query: 58 LRSLL----ANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLS 113
LR LL A L +VLL T+L+ LF AV LA+AA L G+VWVF SLIGL PLAER+S
Sbjct: 61 LRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVS 120
Query: 114 FLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCXXXXXXXXXXXXXXX 173
FL+E IA GPT GG++NAT GNV E+IIAL AL + K+E++K
Sbjct: 121 FLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLG 180
Query: 174 XXXXXXXIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAAL 233
I N+ +P D +QA V+ LL+L VLCH L+ +Y ++GD ++ + +
Sbjct: 181 SSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDS--INSSSVM 238
Query: 234 HLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQVEXXXXXXLVIAQDDEPVLGFSSAMIW 293
LSR+C+I+MLIAY L FQL THRQ+FE ++ A D + V+GF+SAM+W
Sbjct: 239 QLSRSCAIVMLIAYFGSLMFQLKTHRQIFELEEDSSDSSSSEDDATD-KSVIGFASAMVW 297
Query: 294 XXXXXXXXXXXSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMD 353
S YVV+TIE ASES + V FISIILLPIVGNAAEHAGA+IFA KNK+D
Sbjct: 298 LIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKID 357
Query: 354 ITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGES 413
I+LG++LGSATQISM VVPV +IV+W IPMDLDFNLLETGSL +A++ TAFTLQ+ +
Sbjct: 358 ISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKW 417
Query: 414 HYLKGLILVLCYAVISVCFFVIR 436
HYLKGL LV Y VI+VCFFV++
Sbjct: 418 HYLKGLNLVFSYIVIAVCFFVMK 440
>Os03g0397400 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 437
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 232/382 (60%), Gaps = 18/382 (4%)
Query: 59 RSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFG-QVWVFVLSLIGLVPLAERLSFLTE 117
R L ++ V+L ++ +L P LA+ YL Q WVF+ SLIG+ PLAERL + TE
Sbjct: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATE 117
Query: 118 QIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCXXXXXXXXXXXXXXXXXXX 177
Q+A YTGPT+GGLLNATFGN TE+II+L AL+ G I VV+
Sbjct: 118 QLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFF 177
Query: 178 XXXIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSR 237
+ + Q ++ A VN+ LL++AVL P +L + + + G + + LSR
Sbjct: 178 AGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQY----GKSEVSLSR 233
Query: 238 ACSILMLIAYLAYLFFQLNTHRQLFEP-----QQVEXXXXXXLVIAQDDEPVLGFSSAMI 292
S +ML+AY +YLFFQL + R L+ P ++V I Q + A+
Sbjct: 234 FSSCIMLVAYASYLFFQLKSQRSLYSPIGEQEEEVTEDEEEEKEITQGE--------AIC 285
Query: 293 WXXXXXXXXXXXSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKM 352
W SGY+V I+ ASES + V+FIS+ILLPIVGNAAEHA A++FA+K+K+
Sbjct: 286 WLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKL 345
Query: 353 DITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGE 412
DITLGV++GS+TQISMFV+P V++ W MG MDL+F L ET +LF+ +LV AF LQEG
Sbjct: 346 DITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGT 405
Query: 413 SHYLKGLILVLCYAVISVCFFV 434
S+Y KGL+L+LCY +++ FFV
Sbjct: 406 SNYFKGLMLILCYLIVAASFFV 427
>Os04g0653200 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 417
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 226/377 (59%), Gaps = 5/377 (1%)
Query: 58 LRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTE 117
+ S L ++ V+ T++L LL P +I Y VF+ S++G+ PLAERL + TE
Sbjct: 37 VESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATE 96
Query: 118 QIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCXXXXXXXXXXXXXXXXXXX 177
Q+A YTGPTVGGLLNATFGN TE+IIA+ AL+ G I VV+
Sbjct: 97 QLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFF 156
Query: 178 XXXIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSR 237
I + Q + A VN+ LL++AV+ P +L + + G + + LSR
Sbjct: 157 AGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFT----HSEVRQGASEVSLSR 212
Query: 238 ACSILMLIAYLAYLFFQLNTHRQLFEPQQVEXXXXXXLVIAQDDEPVLGFSSAMIWXXXX 297
S +ML+AY +YL+FQL+ + P E ++ + G ++ W
Sbjct: 213 FSSCIMLVAYASYLYFQLSGRNNAYSPIGSEEMPNEDAAEEDEESEI-GMWESIAWLAML 271
Query: 298 XXXXXXXSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLG 357
S Y+V+ IE AS+S L V+FIS+ILLPIVGNAAEHA A++FA+K+K+DITLG
Sbjct: 272 TLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLG 331
Query: 358 VSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLK 417
V++GS+TQISMFV+P V++ W MG MDL+F L ET +LF+ +LV AF LQ+G ++YLK
Sbjct: 332 VAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLK 391
Query: 418 GLILVLCYAVISVCFFV 434
GL+L+LCY +++ FFV
Sbjct: 392 GLMLILCYLIVAASFFV 408
>AK072134
Length = 183
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/132 (83%), Positives = 110/132 (83%)
Query: 80 AVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVT 139
AVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVT
Sbjct: 29 AVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVT 88
Query: 140 EVIIALLALREGKIEVVKCXXXXXXXXXXXXXXXXXXXXXXIANLRAHQPYDTKQAHVNT 199
EVIIALLALREGKIEVVKC IANLRAHQPYDTKQAHVNT
Sbjct: 89 EVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNT 148
Query: 200 ALLMLAVLCHSL 211
ALLMLAVLCHSL
Sbjct: 149 ALLMLAVLCHSL 160
>Os02g0138900 Sodium/calcium exchanger membrane region domain containing protein
Length = 129
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%)
Query: 76 LLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATF 135
L F + I T L + WVF LS++G++PLAERL F TEQ+A +TGP VG LLN+ F
Sbjct: 2 LSFATLCSCIDITDLSLFKGWVFPLSMLGIIPLAERLGFATEQLALFTGPKVGRLLNSAF 61
Query: 136 GNVTEVIIALLALREGKIEVVK 157
GN TE+II++ AL GK+ VV+
Sbjct: 62 GNATELIISIHALSRGKLHVVQ 83
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,800,541
Number of extensions: 382429
Number of successful extensions: 972
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 956
Number of HSP's successfully gapped: 7
Length of query: 453
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 349
Effective length of database: 11,605,545
Effective search space: 4050335205
Effective search space used: 4050335205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)