BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0358000 Os05g0358000|AK101263
         (233 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0358000  Drought induced 19 family protein                   361   e-100
Os05g0562200  Drought induced 19 family protein                    96   2e-20
Os01g0672400  Drought induced 19 family protein                    90   2e-18
Os12g0556100  Drought induced 19 family protein                    87   8e-18
Os01g0971100  Drought induced 19 family protein                    76   2e-14
Os02g0304900  Drought induced 19 family protein                    75   6e-14

>Os05g0358000 Drought induced 19 family protein
          Length = 233

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/233 (78%), Positives = 182/233 (78%)

Query: 1   MDAGDAWGRXXXXXXXXXXXXRRLQARYDLYMGFXXXXXXXXXXXXXXXXXXXYNCPFCG 60
           MDAGDAWGR            RRLQARYDLYMGF                   YNCPFCG
Sbjct: 1   MDAGDAWGRSSSSSSSAAAAARRLQARYDLYMGFDDADAAGVEEVEARGGGEAYNCPFCG 60

Query: 61  EDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKIX 120
           EDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKI 
Sbjct: 61  EDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKIS 120

Query: 121 XXXXXXXXXXXXXXXXXXXQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSD 180
                              QSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSD
Sbjct: 121 SGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSD 180

Query: 181 SSDNNFLLNKFPDDKTAERAEPSLSEKDQKERAQRSKFVRGLVLSTIFEDDNL 233
           SSDNNFLLNKFPDDKTAERAEPSLSEKDQKERAQRSKFVRGLVLSTIFEDDNL
Sbjct: 181 SSDNNFLLNKFPDDKTAERAEPSLSEKDQKERAQRSKFVRGLVLSTIFEDDNL 233



>Os05g0562200 Drought induced 19 family protein
          Length = 226

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 28/195 (14%)

Query: 54  YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
           + CP+C ED D V+ C H+++EH  E  +  CPIC+ ++  D++ H+T+QHG  FK   R
Sbjct: 42  FACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFK--NR 99

Query: 114 RRVRKIXXXXXXXXXXXXXXXXXXXXQSFLGG----SSYVSNPPAAAPDPFLSSLICSLP 169
           RR+R+                     Q  LGG    S+  SN    + DP LSS   S P
Sbjct: 100 RRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFP 159

Query: 170 VAEPSKDLHSDSSDNNFLLNKFPDDKTAERAEP----------SLS----EKDQKERAQR 215
                    SD+ + +      PDD +  +  P          SL+    E+ +K+ + R
Sbjct: 160 T--------SDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVR 211

Query: 216 SKFVRGLVLSTIFED 230
           + FV+ L+L+T+F D
Sbjct: 212 ATFVQDLLLTTLFGD 226



>Os01g0672400 Drought induced 19 family protein
          Length = 246

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 14/186 (7%)

Query: 56  CPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRR 115
           CP+C ED D  + C H++++H  E  +  CPIC  ++  D++ H+TMQHG  FK    RR
Sbjct: 64  CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSG--RR 121

Query: 116 VRKIXXXXXXXXXXXXXXXXXXXXQSFLGGS--SYVSNPPAA--APDPFLSSL---ICSL 168
           +R+                     Q+ LGG      SN  A   + DP LSS      +L
Sbjct: 122 MRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTL 181

Query: 169 PVAEPSKDLHSDSSDNNFLLNKFPDDKTAERAEPSLS----EKDQKERAQRSKFVRGLVL 224
              E SK       D+  +    P      R + SL+    E+ +K+   R+ FV+GLVL
Sbjct: 182 DSEERSK-APVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGLVL 240

Query: 225 STIFED 230
           ST+FED
Sbjct: 241 STLFED 246



>Os12g0556100 Drought induced 19 family protein
          Length = 186

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 18/156 (11%)

Query: 56  CPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQ-RRR 114
           CPFC E+FD    CCH++DEH  E ++GVCPIC   VG+DL+ H+T +H S+FK + R R
Sbjct: 43  CPFCDEEFDGFGLCCHIEDEHQAENRAGVCPICYDAVGMDLVSHITSEHPSFFKGKWRNR 102

Query: 115 RVRKIXXXXXXXXXXXXXXXXXXXXQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPS 174
           RV                       Q   GGS+  ++     PDP LSS + +    +  
Sbjct: 103 RV----SHGSHSSTRATLKKDAAYLQYRYGGSTRAAS-HNTDPDPLLSSFVGNFTDTDLP 157

Query: 175 KDLHSDSSDNNFLLNKFPDDKTAERAEPSLSEKDQK 210
           KD+  +             D+T E+++ SL +K+QK
Sbjct: 158 KDVQQEFR-----------DETDEKSD-SLVQKEQK 181



>Os01g0971100 Drought induced 19 family protein
          Length = 202

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 21/181 (11%)

Query: 54  YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
           + CPFC  + +    C H+ +EH  + ++ VCP+CA  +G D+  H  +QH    K  RR
Sbjct: 37  FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLK--RR 94

Query: 114 RRVRKIXXXXXXXXXXXXXXXXXXXXQSFLGGSSYVSNPPA---AAPDPFLSSLICSLPV 170
           +  R                        F G   Y+ N       APDP LS  ICS+  
Sbjct: 95  KPSRP---------SSSWPTPSNNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSM-- 143

Query: 171 AEPSKDLHSDSSDNNFLLNKFP-DDKTAERAEPS--LSEKDQKERAQRSKFVRGLVLSTI 227
                D +SD+++    ++    D + ++R   +   S+ + KER QR +FV+ +++STI
Sbjct: 144 --AQTDTNSDNTNTEIAVSAVSHDQRLSQRVTLTDDASKLELKERLQRIEFVKEIIMSTI 201

Query: 228 F 228
            
Sbjct: 202 L 202



>Os02g0304900 Drought induced 19 family protein
          Length = 245

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 11/187 (5%)

Query: 54  YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
           + CP+C ED D  + C H++DEH  E+K   CP+C+ R+  DL+ H+T+QH   F++QR 
Sbjct: 60  FPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRH 119

Query: 114 RRVRKIXXXXXXXXXXXXXXXXXXXXQSFLGGSSYVS--NPPAAAPDPFLSSLICSLPVA 171
            R+R++                    +  LG SS  S  N  ++  D  LSSL+ +L  +
Sbjct: 120 HRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAASSVTDSLLSSLVLNLSSS 179

Query: 172 EPSKDLHSDSS----DNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLV 223
           E ++D    S+    +NN+     P       ++ +LS+++++ R    A RS FV+ L+
Sbjct: 180 E-AEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLL 238

Query: 224 LSTIFED 230
           +ST+F+D
Sbjct: 239 VSTLFDD 245



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,831,578
Number of extensions: 245962
Number of successful extensions: 813
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 803
Number of HSP's successfully gapped: 7
Length of query: 233
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 135
Effective length of database: 11,918,829
Effective search space: 1609041915
Effective search space used: 1609041915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)