Os05g0562200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Drought induced 19 family protein.
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Os05g0562200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Drought induced 19 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.46 | 0.259 | 13 | -0.302 | 0.565 | 0.345 | -0.2 | -1.3 | -0.0574 | 1.59 | 20.8 | 3425 | -- | -- |
| 32.28 | 0.265 | 13 | 0.0117 | 0.549 | 0.523 | -0.249 | -- | 0.00623 | 1.5 | 21 | 1886 | -- | -- |
| 30.46 | 0.257 | 13 | -0.324 | 0.561 | 0.348 | -- | -1.33 | -0.0721 | 1.55 | 21.1 | 3820 | -- | -- |
| 32.16 | 0.264 | 13 | -0.0933 | 0.556 | 0.68 | -- | -- | 0.00891 | 1.6 | 19.4 | 3445 | -- | -- |
| 48.48 | 0.324 | 13 | -0.272 | -- | 0.472 | -- | -1.1 | -0.0663 | -- | 21.4 | 2461 | -- | -- |
| 39.01 | 0.293 | 12.9 | 0.267 | 0.58 | -- | -0.242 | -- | 0.159 | 1.57 | -- | -- | -- | -- |
| 39.24 | 0.293 | 12.9 | 0.275 | 0.58 | -- | -- | -- | 0.161 | 1.53 | -- | -- | -- | -- |
| 49.89 | 0.329 | 13 | 0.0449 | -- | 0.576 | -- | -- | 0.0249 | -- | 20.9 | 985 | -- | -- |
| 32.29 | 0.265 | 13 | -- | 0.569 | 0.63 | -- | -- | 0.026 | 1.59 | 19.33 | 3424 | -- | -- |
| 59.83 | 0.361 | 12.9 | 0.298 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 41.23 | 0.3 | 12.9 | -- | 0.585 | -- | -- | -- | 0.13 | 1.55 | -- | -- | -- | -- |
| 49.88 | 0.329 | 13 | -- | -- | 0.572 | -- | -- | 0.0061 | -- | 21.2 | 966 | -- | -- |
| 62.18 | 0.368 | 12.9 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.25 | temperature | 20.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 4 | 30.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 6 | 30.11 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 7 | 30.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 66 | 30.42 | temperature | 20.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 78 | 30.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 86 | 30.46 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 95 | 30.49 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 101 | 30.50 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 107 | 30.51 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 111 | 30.52 | temperature | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 116 | 30.53 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 126 | 30.56 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 131 | 30.57 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 137 | 30.58 | temperature | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 158 | 30.60 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 159 | 30.60 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 206 | 30.67 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 216 | 30.69 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 235 | 30.72 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 275 | 30.78 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 22 | 16 |
| 303 | 30.80 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 307 | 30.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 308 | 30.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 394 | 30.87 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 405 | 30.88 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 16 |
| 421 | 30.89 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 441 | 30.91 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 442 | 30.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 452 | 30.91 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 14 |
| 454 | 30.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 475 | 30.93 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 494 | 30.93 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 502 | 30.94 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 552 | 30.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 554 | 30.96 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 555 | 30.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 557 | 30.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 572 | 30.96 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 18 | NA |
| 574 | 30.96 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 616 | 30.98 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 639 | 30.99 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 641 | 30.99 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 642 | 30.99 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 746 | 31.02 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 748 | 31.02 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 769 | 31.03 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 771 | 31.03 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 772 | 31.03 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 786 | 31.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 820 | 31.05 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 877 | 31.07 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 879 | 31.07 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 880 | 31.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 881 | 31.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 900 | 31.07 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 901 | 31.07 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 902 | 31.07 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 904 | 31.07 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 913 | 31.08 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 979 | 31.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 1000 | 31.10 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 4 |