BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0562200 Os05g0562200|AK061766
(226 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0562200 Drought induced 19 family protein 407 e-114
Os01g0672400 Drought induced 19 family protein 275 2e-74
Os02g0304900 Drought induced 19 family protein 157 5e-39
Os05g0358000 Drought induced 19 family protein 93 2e-19
Os12g0556100 Drought induced 19 family protein 65 3e-11
>Os05g0562200 Drought induced 19 family protein
Length = 226
Score = 407 bits (1045), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/226 (88%), Positives = 200/226 (88%)
Query: 1 MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCXXX 60
MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLC
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHL 60
Query: 61 XXXXXXXXXXXXCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDL 120
CPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDL
Sbjct: 61 EEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDL 120
Query: 121 REAHLQVLLGGGGHRXXXXXXXXXXXADPLLSSFGLSFPTSDTEETSKPPISIPDDASVI 180
REAHLQVLLGGGGHR ADPLLSSFGLSFPTSDTEETSKPPISIPDDASVI
Sbjct: 121 REAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVI 180
Query: 181 KETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
KETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD
Sbjct: 181 KETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
>Os01g0672400 Drought induced 19 family protein
Length = 246
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/246 (59%), Positives = 168/246 (68%), Gaps = 20/246 (8%)
Query: 1 MDSEHWISRLAAAKRFYAAQLGHAD-RAGM-------------------EEVDMDEEVRP 40
MDSEHWIS LAAAKRFYAAQLGH D AG+ E+ ++E P
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWP 60
Query: 41 EFACPYCYEDHDVVSLCXXXXXXXXXXXXXXXCPICSDKIAKDMLNHITVQHGYLFKNRR 100
+ ACPYCYEDHD+ SLC CPIC +KI +DMLNHIT+QHGYLFK+ R
Sbjct: 61 DVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGR 120
Query: 101 RLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRXXXXXXXXXXXADPLLSSFGLSFPT 160
R+RRF IP SQALSLLSRDLR+A LQ LLGGG + ADPLLSSFGL F T
Sbjct: 121 RMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFST 180
Query: 161 SDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLL 220
D+EE SK P+ IPDD S+ K+TPAQPW+S IDSSLT EEREQKRKQA+ RATFVQ L+L
Sbjct: 181 LDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGLVL 240
Query: 221 TTLFGD 226
+TLF D
Sbjct: 241 STLFED 246
>Os02g0304900 Drought induced 19 family protein
Length = 245
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 23/247 (9%)
Query: 1 MDSEHWISRLAAAKRFYAAQLGHA------------------DRAGMEEVDMDEEVRPEF 42
MDS+HWISRL AAKR YA Q DR G ++V+ ++EVRP+F
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDF 60
Query: 43 ACPYCYEDHDVVSLCXXXXXXXXXXXXXXXCPICSDKIAKDMLNHITVQHGYLF--KNRR 100
CPYCYEDHD+ SLC CP+CS +I+KD+L+HIT+QH YLF +
Sbjct: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHH 120
Query: 101 RLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRXXXXXXXXXXXADPLLSSFGLSFPT 160
RLRR +P + ALSL RDL+E +L+VLLG D LLSS L+ +
Sbjct: 121 RLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSR--SSGTNAASSVTDSLLSSLVLNLSS 178
Query: 161 SDTEETSK-PPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLL 219
S+ E+T+K +++ ++ + P++ W +S DS+L++EERE++R++A+VR++FVQ LL
Sbjct: 179 SEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLL 238
Query: 220 LTTLFGD 226
++TLF D
Sbjct: 239 VSTLFDD 245
>Os05g0358000 Drought induced 19 family protein
Length = 233
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 9 RLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCXXXXXXXXXXX 68
RL A Y AD AG+EEV+ + CP+C ED D V+ C
Sbjct: 23 RLQARYDLYMG-FDDADAAGVEEVEA-RGGGEAYNCPFCGEDFDFVAFCCHVDDEHAVEA 80
Query: 69 XXXXCPICSDKIAKDMLNHITVQHGYLFK--NRRRLRRFVIPGSQALSLLSRDLREAHLQ 126
CPIC+ ++ D++ H+T+QHG FK RRR+R+ LSLL +DLR+ LQ
Sbjct: 81 KSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQ 140
Query: 127 VLLGGGGHRXXXXXXXXXXXADPLLSSFGLSFPT--------SDTEETSKPPISIPDDAS 178
LGG + DP LSS S P SD+ + + PDD +
Sbjct: 141 SFLGGSSY----VSNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKT 196
Query: 179 VIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
+ P SL+ E+ +K+ + R+ FV+ L+L+T+F D
Sbjct: 197 AERAEP----------SLS----EKDQKERAQRSKFVRGLVLSTIFED 230
>Os12g0556100 Drought induced 19 family protein
Length = 186
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 1 MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCXXX 60
MD + W RLAA R + E EE E ACP+C E+ D LC
Sbjct: 1 MDMDSW-ERLAADARLQGSCFDALIGMEEAEGSEGEEEAAEVACPFCDEEFDGFGLCCHI 59
Query: 61 XXXXXXXXXXXXCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDL 120
CPIC D + D+++HIT +H FK + R RR V GS + + +
Sbjct: 60 EDEHQAENRAGVCPICYDAVGMDLVSHITSEHPSFFKGKWRNRR-VSHGSHSSTRATLKK 118
Query: 121 REAHLQVLLGGGGHRXXXXXXXXXXXADPLLSSFGLSFPTSD 162
A+LQ GG DPLLSSF +F +D
Sbjct: 119 DAAYLQYRYGGS-----TRAASHNTDPDPLLSSFVGNFTDTD 155
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,025,477
Number of extensions: 253412
Number of successful extensions: 844
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 837
Number of HSP's successfully gapped: 5
Length of query: 226
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 129
Effective length of database: 11,971,043
Effective search space: 1544264547
Effective search space used: 1544264547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)