Os05g0358000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Drought induced 19 family protein.
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Os05g0358000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Drought induced 19 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.47 | 0.202 | 12.3 | -0.894 | 0.928 | 0.372 | 0.138 | 0.307 | -0.131 | 6.82 | 1015 | 5417 | -- | -- |
| 18.7 | 0.201 | 12.3 | -0.937 | 0.93 | 0.348 | 0.152 | -- | -0.139 | 6.84 | 1015 | 5392 | -- | -- |
| 18.52 | 0.2 | 12.3 | -0.891 | 0.928 | 0.37 | -- | 0.308 | -0.131 | 6.82 | 1015 | 5417 | -- | -- |
| 18.75 | 0.202 | 12.3 | -0.938 | 0.929 | 0.35 | -- | -- | -0.145 | 6.82 | 1014 | 5395 | -- | -- |
| 63.03 | 0.37 | 12.4 | -0.815 | -- | 0.413 | -- | 0.327 | -0.105 | -- | 1015 | 4336 | -- | -- |
| 23.68 | 0.228 | 12.3 | -0.882 | 0.935 | -- | 0.117 | -- | -0.0793 | 6.82 | -- | -- | -- | -- |
| 23.72 | 0.228 | 12.3 | -0.88 | 0.935 | -- | -- | -- | -0.0797 | 6.81 | -- | -- | -- | -- |
| 63.37 | 0.371 | 12.4 | -0.875 | -- | 0.434 | -- | -- | -0.123 | -- | 1015 | 4457 | -- | -- |
| 39.81 | 0.294 | 12.3 | -- | 0.904 | 0.402 | -- | -- | -0.0311 | 6.87 | 1014 | 4146 | -- | -- |
| 69.47 | 0.389 | 12.3 | -0.859 | -- | -- | -- | -- | -0.0616 | -- | -- | -- | -- | -- |
| 44.11 | 0.311 | 12.3 | -- | 0.925 | -- | -- | -- | 0.0183 | 6.87 | -- | -- | -- | -- |
| 83.12 | 0.425 | 12.3 | -- | -- | 0.445 | -- | -- | -0.0187 | -- | 1014 | 4179 | -- | -- |
| 88.93 | 0.44 | 12.3 | -- | -- | -- | -- | -- | 0.0337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 5 | 18.40 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 10 | 18.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 20 | 18.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 39 | 18.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 91 | 18.60 | radiation | 1.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 96 | 18.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 97 | 18.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 98 | 18.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 100 | 18.65 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 102 | 18.66 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 111 | 18.67 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 116 | 18.68 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 13 | 2 |
| 117 | 18.68 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 179 | 18.72 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 202 | 18.74 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 203 | 18.74 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 242 | 18.75 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 17 | NA |
| 272 | 18.76 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 312 | 18.77 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 2 | 14 |
| 349 | 18.77 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 368 | 18.78 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 476 | 18.79 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 525 | 18.80 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 609 | 18.81 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 654 | 18.82 | atmosphere | 1015.0 | 4320 | < th | dose independent | no | NA | NA |
| 702 | 18.82 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 22 |
| 711 | 18.82 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 722 | 18.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 726 | 18.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 8 |
| 800 | 18.83 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 840 | 18.83 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 851 | 18.83 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 21 |
| 857 | 18.83 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 16 | 22 |
| 882 | 18.83 | atmosphere | 1010.0 | 4320 | > th | dose dependent | no | NA | NA |
| 931 | 18.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |