Os01g0672400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Drought induced 19 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0672400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Drought induced 19 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.09 | 0.188 | 12.5 | 0.702 | 0.252 | -0.518 | 0.26 | 1.03 | 0.223 | 11.8 | 20.85 | 1584 | -- | -- |
| 16.43 | 0.189 | 12.5 | 0.505 | 0.252 | -0.544 | 0.24 | -- | 0.195 | 12 | 17.48 | 7477 | -- | -- |
| 16.35 | 0.188 | 12.5 | 0.711 | 0.249 | -0.508 | -- | 1.02 | 0.222 | 11.5 | 21.14 | 1537 | -- | -- |
| 16.46 | 0.189 | 12.5 | 0.592 | 0.249 | -0.624 | -- | -- | 0.213 | 11.3 | 14.46 | 7326 | -- | -- |
| 18.04 | 0.198 | 12.5 | 0.618 | -- | -0.641 | -- | 0.777 | 0.208 | -- | 20.53 | 896 | -- | -- |
| 23.57 | 0.228 | 12.5 | 0.224 | 0.264 | -- | 0.258 | -- | 0.0286 | 11.7 | -- | -- | -- | -- |
| 23.85 | 0.229 | 12.5 | 0.234 | 0.263 | -- | -- | -- | 0.0294 | 11.5 | -- | -- | -- | -- |
| 18.31 | 0.199 | 12.5 | 0.461 | -- | -0.679 | -- | -- | 0.122 | -- | 17.1 | 907 | -- | -- |
| 21.78 | 0.219 | 12.5 | -- | 0.396 | -0.575 | -- | -- | 0.0715 | 12.5 | 13.17 | 7098 | -- | -- |
| 28.2 | 0.248 | 12.6 | 0.227 | -- | -- | -- | -- | 0.0264 | -- | -- | -- | -- | -- |
| 25.29 | 0.235 | 12.6 | -- | 0.261 | -- | -- | -- | 0.00332 | 11.5 | -- | -- | -- | -- |
| 22.62 | 0.221 | 12.5 | -- | -- | -0.475 | -- | -- | 0.0846 | -- | 19.47 | 897 | -- | -- |
| 29.55 | 0.254 | 12.6 | -- | -- | -- | -- | -- | 0.00131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 13 | 15.69 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 16 | 15.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 37 | 15.87 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 43 | 15.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 50 | 15.90 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 56 | 15.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 68 | 15.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 69 | 15.98 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 76 | 16.00 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 78 | 16.00 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 97 | 16.02 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 244 | 16.13 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 263 | 16.13 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 326 | 16.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 327 | 16.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 328 | 16.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 336 | 16.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 15 |
| 373 | 16.19 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 424 | 16.21 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 433 | 16.21 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 442 | 16.22 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 466 | 16.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 522 | 16.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 665 | 16.33 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 674 | 16.33 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 728 | 16.35 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 10 | 10 |
| 771 | 16.36 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 779 | 16.37 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 799 | 16.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 818 | 16.39 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 833 | 16.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 872 | 16.41 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 901 | 16.42 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 951 | 16.43 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 23 |