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Os12g0556100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Drought induced 19 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0161) R2 : 0.441
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.796 (0.0422) R2dC : 0.438 R2C : 0.432
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0787 (0.034) R2dN8 : 0.00851 R2N8 : 0.00249
σ : 0.304
deviance : 42.37
__
_____
C
peak time of C : 17.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.55 0.251 11.8 0.364 0.792 -0.391 -0.569 -0.902 0.176 17.6 31.65 1286 -- --
29.89 0.255 11.8 0.485 0.807 -0.451 -0.559 -- 0.206 17.7 31.38 1241 -- --
29.3 0.252 11.8 0.369 0.79 -0.393 -- -0.873 0.177 17.7 31.22 1268 -- --
30.62 0.258 11.8 0.486 0.799 -0.433 -- -- 0.209 17.7 30.33 1241 -- --
61.5 0.365 11.8 0.36 -- -0.409 -- -0.958 0.161 -- 29.35 1313 -- --
36.91 0.285 11.8 0.423 0.807 -- -0.546 -- 0.128 17.3 -- -- -- --
37.65 0.287 11.8 0.423 0.803 -- -- -- 0.126 17.3 -- -- -- --
63.02 0.37 11.7 0.453 -- -0.451 -- -- 0.219 -- 25.26 1313 -- --
34.54 0.274 11.8 -- 0.791 -0.573 -- -- 0.229 17.6 35.73 8454 -- --
71.36 0.395 11.8 0.395 -- -- -- -- 0.106 -- -- -- -- --
42.37 0.304 11.8 -- 0.796 -- -- -- 0.0787 17.3 -- -- -- --
66.43 0.38 11.7 -- -- -0.588 -- -- 0.24 -- 36.48 8530 -- --
75.48 0.406 11.8 -- -- -- -- -- 0.0619 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.99 wind 9.0 90 < th dose dependent rect. 8 19
5 24.64 precipitation 0.1 270 < th dose independent rect. 3 2
6 24.64 precipitation 0.1 270 < th dose dependent rect. 3 2
8 24.88 wind 5.0 90 < th dose independent rect. 8 19
10 24.93 temperature 25.0 270 < th dose independent rect. 3 2
11 24.95 radiation 1.0 270 < th dose dependent rect. 3 2
12 24.96 wind 5.0 270 < th dose independent rect. 3 2
15 25.02 precipitation 0.1 270 < th dose independent rect. 1 5
16 25.02 precipitation 0.1 270 < th dose dependent rect. 1 5
20 25.05 temperature 10.0 270 > th dose independent rect. 3 2
23 25.05 humidity 50.0 270 > th dose independent rect. 3 2
26 25.05 atmosphere 995.0 270 > th dose independent rect. 3 2
27 25.05 atmosphere 1010.0 270 < th dose independent rect. 3 2
29 25.05 radiation 20.0 270 < th dose independent rect. 3 2
32 25.05 temperature 10.0 270 > th dose independent rect. 5 22
33 25.05 radiation 20.0 270 < th dose dependent rect. 3 2
38 25.07 radiation 1.0 270 < th dose independent rect. 3 2
43 25.21 wind 7.0 270 < th dose independent rect. 1 5
44 25.21 wind 9.0 270 < th dose independent rect. 5 22
45 25.25 humidity 50.0 270 > th dose dependent rect. 3 2
49 25.27 atmosphere 995.0 270 > th dose independent rect. 6 19
56 25.33 temperature 10.0 270 > th dose independent rect. 1 5
58 25.33 temperature 30.0 270 < th dose independent rect. 1 5
59 25.33 humidity 50.0 270 > th dose independent rect. 1 5
62 25.33 atmosphere 995.0 270 > th dose independent rect. 1 5
63 25.33 atmosphere 1010.0 270 < th dose independent rect. 1 5
65 25.33 radiation 20.0 270 < th dose independent rect. 1 5
68 25.33 temperature 10.0 270 > th dose independent rect. 6 19
69 25.34 radiation 1.0 270 < th dose independent rect. 2 4
86 25.35 radiation 20.0 270 < th dose dependent rect. 2 4
89 25.36 wind 9.0 270 < th dose independent rect. 6 19
105 25.52 precipitation 0.1 270 < th dose independent rect. 6 19
106 25.52 precipitation 0.1 270 < th dose dependent rect. 6 19
108 25.53 radiation 1.0 270 < th dose dependent rect. 2 9
114 25.55 wind 9.0 90 < th dose dependent rect. 3 4
115 25.56 wind 9.0 270 < th dose dependent rect. 3 2
116 25.57 humidity 50.0 270 > th dose dependent rect. 2 4
143 25.61 humidity 50.0 270 > th dose independent rect. 6 19
176 25.78 radiation 1.0 270 < th dose independent rect. 2 9
195 25.88 wind 1.0 270 > th dose independent rect. 1 5
197 25.88 precipitation 0.1 270 < th dose independent rect. 5 22
198 25.88 precipitation 0.1 270 < th dose dependent rect. 5 22
217 25.92 temperature 30.0 270 < th dose dependent rect. 3 2
263 26.15 temperature 30.0 270 < th dose independent rect. 6 19
308 26.28 wind 1.0 270 > th dose independent rect. 2 3
316 26.34 temperature 30.0 90 < th dose independent rect. 8 19
337 26.47 radiation 40.0 270 < th dose dependent rect. 14 12
342 26.49 temperature 30.0 270 < th dose dependent rect. 1 5
347 26.51 wind 1.0 270 > th dose independent rect. 3 1
349 26.51 radiation 40.0 270 < th dose independent rect. 6 20
352 26.52 temperature 30.0 270 < th dose independent rect. 17 9
360 26.53 radiation 40.0 270 < th dose dependent rect. 6 20
368 26.55 precipitation 0.1 10 < th dose independent rect. 3 5
370 26.55 precipitation 0.1 10 < th dose dependent rect. 3 5
395 26.59 humidity 50.0 90 > th dose dependent rect. 17 10
399 26.62 temperature 10.0 270 > th dose dependent rect. 3 2
402 26.63 radiation 40.0 270 < th dose independent rect. 7 18
417 26.68 radiation 10.0 270 < th dose independent rect. 15 11
434 26.73 wind 5.0 10 < th dose independent rect. 3 5
437 26.74 radiation 40.0 270 < th dose dependent rect. 7 18
439 26.74 humidity 50.0 270 > th dose dependent rect. 6 19
448 26.77 radiation 10.0 270 < th dose dependent rect. 6 20
449 26.78 humidity 70.0 270 > th dose independent rect. 6 20
475 26.82 humidity 70.0 270 > th dose independent rect. 16 10
477 26.82 temperature 10.0 270 > th dose dependent rect. 2 4
488 26.85 wind 1.0 270 > th dose independent rect. 11 10
490 26.86 humidity 70.0 270 > th dose independent rect. 7 18
506 26.89 atmosphere 995.0 10 > th dose independent rect. 8 20
507 26.89 atmosphere 995.0 270 > th dose dependent rect. 3 2
568 27.02 precipitation 0.1 10 < th dose independent rect. 8 19
570 27.02 precipitation 0.1 10 < th dose dependent rect. 8 19
574 27.03 temperature 10.0 10 > th dose independent rect. 4 4
576 27.03 temperature 30.0 10 < th dose independent rect. 4 4
577 27.03 humidity 50.0 10 > th dose independent rect. 4 4
579 27.03 atmosphere 995.0 10 > th dose independent rect. 4 4
580 27.03 atmosphere 1015.0 10 < th dose independent rect. 4 4
591 27.03 temperature 10.0 10 > th dose independent rect. 8 19
598 27.04 radiation 30.0 10 < th dose independent rect. 4 4
627 27.07 wind 9.0 10 < th dose independent rect. 8 19
632 27.08 radiation 1.0 270 < th dose dependent sin 3 NA
704 27.17 atmosphere 1015.0 270 < th dose dependent rect. 3 2
705 27.17 humidity 50.0 10 > th dose dependent rect. 4 4
738 27.25 atmosphere 995.0 270 > th dose independent rect. 17 9
773 27.29 atmosphere 995.0 90 > th dose dependent rect. 3 5
776 27.30 atmosphere 1015.0 270 < th dose independent rect. 6 19
800 27.33 humidity 50.0 270 > th dose dependent rect. 15 10
833 27.36 wind 9.0 270 < th dose dependent rect. 17 8
840 27.37 precipitation 0.1 270 < th dose independent rect. 2 15
847 27.37 precipitation 0.1 270 < th dose dependent rect. 2 15
864 27.40 wind 1.0 270 > th dose independent rect. 12 18
880 27.42 radiation 40.0 10 < th dose dependent rect. 4 4
901 27.44 radiation 1.0 270 < th dose independent sin 4 NA
902 27.44 wind 9.0 270 < th dose independent rect. 21 14
922 27.47 atmosphere 995.0 90 > th dose dependent rect. 8 19
924 27.48 temperature 15.0 270 > th dose independent rect. 6 6
929 27.49 temperature 10.0 270 > th dose independent rect. 11 10
933 27.49 temperature 10.0 270 > th dose independent rect. 21 14
934 27.49 atmosphere 995.0 270 > th dose independent rect. 21 14
947 27.51 atmosphere 1015.0 270 < th dose independent rect. 11 10