Os02g0304900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Drought induced 19 family protein.
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Os02g0304900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Drought induced 19 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.85 | 0.239 | 11.1 | -0.585 | 0.337 | -1.1 | -0.867 | -0.782 | 0.178 | 12.5 | 24.43 | 19 | -- | -- |
| 26.43 | 0.241 | 11.1 | -0.701 | 0.343 | -1.02 | -0.609 | -- | 0.149 | 12.4 | 24.6 | 18 | -- | -- |
| 27.9 | 0.248 | 11.1 | -0.717 | 0.343 | -1.04 | -- | -0.0676 | 0.146 | 11.9 | 24.6 | 2 | -- | -- |
| 27.91 | 0.248 | 11.1 | -0.726 | 0.344 | -1.03 | -- | -- | 0.144 | 11.9 | 24.6 | 2 | -- | -- |
| 33.9 | 0.273 | 11.1 | -0.788 | -- | -1.18 | -- | 0.114 | 0.0679 | -- | 26.89 | 2 | -- | -- |
| 41.97 | 0.304 | 11.1 | -0.462 | 0.529 | -- | -0.623 | -- | 0.336 | 12.5 | -- | -- | -- | -- |
| 43.61 | 0.309 | 11.1 | -0.486 | 0.531 | -- | -- | -- | 0.332 | 12.4 | -- | -- | -- | -- |
| 33.92 | 0.272 | 11.1 | -0.769 | -- | -1.18 | -- | -- | 0.0725 | -- | 26.89 | 2 | -- | -- |
| 40.58 | 0.298 | 11.1 | -- | 0.402 | -0.757 | -- | -- | 0.268 | 12.2 | 24.6 | 2 | -- | -- |
| 61.3 | 0.366 | 11.1 | -0.504 | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
| 49.84 | 0.33 | 11 | -- | 0.538 | -- | -- | -- | 0.386 | 12.4 | -- | -- | -- | -- |
| 48.54 | 0.326 | 11.1 | -- | -- | -0.964 | -- | -- | 0.199 | -- | 26.89 | 2 | -- | -- |
| 68.01 | 0.385 | 11.1 | -- | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 3 | 23.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 65 | 24.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 146 | 25.25 | temperature | 25 | 90 | < th | dose dependent | sin | 12 | NA |
| 159 | 25.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 198 | 25.65 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 224 | 25.77 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 271 | 26.04 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 272 | 26.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 276 | 26.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 277 | 26.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 280 | 26.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 285 | 26.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 300 | 26.18 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 305 | 26.19 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 316 | 26.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 318 | 26.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 327 | 26.33 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 390 | 26.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 415 | 26.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 480 | 27.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 12 |
| 557 | 27.29 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 653 | 27.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 720 | 27.78 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 774 | 27.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 782 | 27.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 812 | 27.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 12 |
| 852 | 28.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 854 | 28.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 10 |
| 947 | 28.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 963 | 28.16 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 980 | 28.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 4 |