BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0304900 Os02g0304900|AK059764
(245 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0304900 Drought induced 19 family protein 319 1e-87
Os05g0562200 Drought induced 19 family protein 159 1e-39
Os01g0672400 Drought induced 19 family protein 134 8e-32
Os05g0358000 Drought induced 19 family protein 72 4e-13
>Os02g0304900 Drought induced 19 family protein
Length = 245
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/245 (68%), Positives = 167/245 (68%)
Query: 1 MDSDHWISRLMAAKRQYALQRAQNXXXXXXXXXXXXXXXXXLDRYGYXXXXXXXXXXXXF 60
MDSDHWISRLMAAKRQYALQRAQN LDRYGY F
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDF 60
Query: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFXXXXXX 120
PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLF
Sbjct: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHH 120
Query: 121 XXXXVAVPSNHALSLGGRDLQETYLKVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 180
VAVPSNHALSLGGRDLQETYLKVLL E
Sbjct: 121 RLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAASSVTDSLLSSLVLNLSSSE 180
Query: 181 AEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQXXXXXXXXXAAVRSSFVQHLLVS 240
AEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQ AAVRSSFVQHLLVS
Sbjct: 181 AEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLVS 240
Query: 241 TLFDD 245
TLFDD
Sbjct: 241 TLFDD 245
>Os05g0562200 Drought induced 19 family protein
Length = 226
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 1 MDSDHWISRLMAAKRQYALQRAQNXXXXXXXXXXXXXXXXXLDRYGYXXXXXXXXXXXXF 60
MDS+HWISRL AAKR YA Q DR G F
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGH------------------ADRAGMEEVDMDEEVRPEF 42
Query: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFXXXXXX 120
CPYCYEDHD+ SLCAHLE+EHPFE CP+CS +I+KD+L+HIT+QH YLF
Sbjct: 43 ACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLF--KNRR 100
Query: 121 XXXXVAVPSNHALSLGGRDLQETYLKVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 178
+P + ALSL RDL+E +L+VLL
Sbjct: 101 RLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPT 160
Query: 179 XEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQXXXXXXXXXAAVRSSFVQHLL 238
+ E+T+K +++ ++ + P++ W +S DS+L++ A+VR++FVQ LL
Sbjct: 161 SDTEETSK-PPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLL 219
Query: 239 VSTLFDD 245
++TLF D
Sbjct: 220 LTTLFGD 226
>Os01g0672400 Drought induced 19 family protein
Length = 246
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 1 MDSDHWISRLMAAKRQYALQRAQNXXXXXXXXXXXXXXXXXLDRYGYXXXXXXXXXXXXF 60
MDS+HWIS L AAKR YA Q + D G +
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLG-HVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATW 59
Query: 61 P---CPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFXXX 117
P CPYCYEDHDI SLCAHLE++HP+E CP+C +I++D+L+HIT+QH YLF
Sbjct: 60 PDVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLF--K 117
Query: 118 XXXXXXXVAVPSNHALSLGGRDLQETYLKVLLXXXXXXXXXXXXXXXXXXXX--XXXXXX 175
+P + ALSL RDL++ L+ LL
Sbjct: 118 SGRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLG 177
Query: 176 XXXXEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQXXXXXXXXXAAVRSSFVQ 235
++E+ +K + + + ++ + P++ W++ DS+L+ A R++FVQ
Sbjct: 178 FSTLDSEERSK-APVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQ 236
Query: 236 HLLVSTLFDD 245
L++STLF+D
Sbjct: 237 GLVLSTLFED 246
>Os05g0358000 Drought induced 19 family protein
Length = 233
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 60 FPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFXXXXX 119
+ CP+C ED D + C H++DEH E+K CP+C+ R+ DL+ H+T+QH F
Sbjct: 54 YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
Query: 120 XXXXXVAVPSNHALSLGGRDLQETYLKVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 179
++ S+ LSL +DL++ L+ L
Sbjct: 114 RRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPV--- 170
Query: 180 EAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQXXXXXXXXXAAVRSSFVQHLLV 239
AE + + + +NN+ P ++ +LS+ A RS FV+ L++
Sbjct: 171 -AEPSKDLHSDS-SDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVL 224
Query: 240 STLFDD 245
ST+F+D
Sbjct: 225 STIFED 230
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,356,020
Number of extensions: 137109
Number of successful extensions: 306
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 300
Number of HSP's successfully gapped: 4
Length of query: 245
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 147
Effective length of database: 11,918,829
Effective search space: 1752067863
Effective search space used: 1752067863
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)