Os01g0971100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Drought induced 19 family protein.
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Os01g0971100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Drought induced 19 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.32 | 0.295 | 13.2 | 0.541 | 2.05 | -0.435 | 0.233 | 0.353 | -0.229 | 4.4 | 19.4 | 15 | -- | -- |
| 39.65 | 0.296 | 13.2 | 0.502 | 2.05 | -0.486 | 0.148 | -- | -0.24 | 4.42 | 19.4 | 5 | -- | -- |
| 39.36 | 0.294 | 13.2 | 0.533 | 2.05 | -0.443 | -- | 0.3 | -0.232 | 4.4 | 19.4 | 15 | -- | -- |
| 39.7 | 0.293 | 13.2 | 0.501 | 2.05 | -0.486 | -- | -- | -0.24 | 4.41 | 19.4 | 5 | -- | -- |
| 170.82 | 0.609 | 13.3 | 0.398 | -- | -1.3 | -- | -0.526 | -0.0132 | -- | 26.3 | 290 | -- | -- |
| 46.72 | 0.32 | 13.2 | 0.36 | 2.11 | -- | 0.0442 | -- | -0.311 | 4.27 | -- | -- | -- | -- |
| 46.73 | 0.32 | 13.2 | 0.36 | 2.11 | -- | -- | -- | -0.311 | 4.27 | -- | -- | -- | -- |
| 162.49 | 0.594 | 13.2 | 0.675 | -- | -1.27 | -- | -- | 0.125 | -- | 26.3 | 296 | -- | -- |
| 45.7 | 0.315 | 13.2 | -- | 2.06 | -0.34 | -- | -- | -0.302 | 4.37 | 19.8 | 5 | -- | -- |
| 286.59 | 0.791 | 13.2 | 0.444 | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
| 50.14 | 0.331 | 13.2 | -- | 2.12 | -- | -- | -- | -0.351 | 4.27 | -- | -- | -- | -- |
| 176.93 | 0.62 | 13.2 | -- | -- | -1.24 | -- | -- | -0.00923 | -- | 26.3 | 279 | -- | -- |
| 291.79 | 0.797 | 13.2 | -- | -- | -- | -- | -- | -0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.59 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 13 |
| 26 | 37.99 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 23 |
| 29 | 38.15 | temperature | 25 | 270 | < th | dose dependent | sin | 19 | NA |
| 30 | 38.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 32 | 38.20 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 8 |
| 36 | 38.26 | temperature | 20 | 10 | < th | dose independent | sin | 15 | NA |
| 37 | 38.26 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 21 |
| 40 | 38.29 | temperature | 20 | 270 | > th | dose independent | sin | 19 | NA |
| 45 | 38.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 6 |
| 52 | 38.37 | temperature | 20 | 90 | < th | dose independent | sin | 16 | NA |
| 56 | 38.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 84 | 38.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 91 | 38.66 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 10 |
| 117 | 38.78 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 11 |
| 140 | 38.88 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 14 |
| 141 | 38.89 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 11 |
| 143 | 38.90 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 9 |
| 154 | 38.92 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 16 |
| 159 | 38.93 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 18 |
| 196 | 39.02 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 20 |
| 216 | 39.07 | temperature | 20 | 270 | < th | dose independent | rect. | 8 | 17 |
| 225 | 39.09 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 18 |
| 237 | 39.11 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 259 | 39.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 271 | 39.15 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 23 |
| 393 | 39.36 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 19 |
| 407 | 39.39 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 23 |
| 436 | 39.44 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 21 |
| 498 | 39.52 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 13 |
| 514 | 39.53 | temperature | 20 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 557 | 39.58 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 16 |
| 573 | 39.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 13 |
| 584 | 39.62 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 19 |
| 591 | 39.63 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 19 |
| 609 | 39.65 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 617 | 39.66 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 634 | 39.68 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 642 | 39.69 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 20 |
| 685 | 39.73 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 21 |
| 693 | 39.74 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 18 |
| 726 | 39.77 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 20 |
| 739 | 39.78 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 22 |
| 753 | 39.79 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 809 | 39.84 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 867 | 39.86 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 21 |
| 887 | 39.87 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 12 |
| 956 | 39.89 | temperature | 20 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 996 | 39.92 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |