BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0149600 Os05g0149600|AK073947
(742 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0149600 Similar to Cullin-1 1487 0.0
Os01g0369000 Similar to Cullin-1 1286 0.0
Os01g0369200 Similar to Cullin-1 946 0.0
AK110300 525 e-149
Os04g0643000 Similar to Cullin-3 (CUL-3). Splice isoform 2 419 e-117
Os08g0170900 Cullin family protein 408 e-114
Os02g0746000 Similar to Cullin-3 (CUL-3). Splice isoform 3 405 e-113
Os12g0236250 197 2e-50
Os05g0193900 135 1e-31
Os01g0935300 Cullin family protein 124 2e-28
Os03g0786800 Similar to Cullin-4A (CUL-4A) 103 5e-22
Os04g0484800 Cullin family protein 67 6e-11
>Os05g0149600 Similar to Cullin-1
Length = 742
Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/742 (96%), Positives = 719/742 (96%)
Query: 1 MGVHAEGHHQAEEHPRGQARATVQLRGLHDALHVRXXXXXXXXXGTIYNMCTQKPPHDYS 60
MGVHAEGHHQAEEHPRGQARATVQLRGLHDALHVR GTIYNMCTQKPPHDYS
Sbjct: 1 MGVHAEGHHQAEEHPRGQARATVQLRGLHDALHVRPPPPPPPPPGTIYNMCTQKPPHDYS 60
Query: 61 QQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYF 120
QQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYF
Sbjct: 61 QQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYF 120
Query: 121 ISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVE 180
ISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVE
Sbjct: 121 ISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVE 180
Query: 181 IGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAEECLKKEKERVGHYL 240
IGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAEECLKKEKERVGHYL
Sbjct: 181 IGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAEECLKKEKERVGHYL 240
Query: 241 HISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLSRMYRLFSKINRGLEP 300
HISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLSRMYRLFSKINRGLEP
Sbjct: 241 HISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLSRMYRLFSKINRGLEP 300
Query: 301 IANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVTEC 360
IANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVTEC
Sbjct: 301 IANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVTEC 360
Query: 361 FQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALEKV 420
FQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALEKV
Sbjct: 361 FQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALEKV 420
Query: 421 VRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT 480
VRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT
Sbjct: 421 VRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT 480
Query: 481 DLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEVFK 540
DLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEVFK
Sbjct: 481 DLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEVFK 540
Query: 541 EFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLLFNGSDRLTYSEIVT 600
EFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLLFNGSDRLTYSEIVT
Sbjct: 541 EFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLLFNGSDRLTYSEIVT 600
Query: 601 QLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPPXX 660
QLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP
Sbjct: 601 QLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPPVD 660
Query: 661 XXXXXXXXXXXXRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKRIE 720
RRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKRIE
Sbjct: 661 EKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKRIE 720
Query: 721 DLITRDYLEREKDNANVYRYLA 742
DLITRDYLEREKDNANVYRYLA
Sbjct: 721 DLITRDYLEREKDNANVYRYLA 742
>Os01g0369000 Similar to Cullin-1
Length = 744
Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/697 (88%), Positives = 653/697 (93%)
Query: 46 TIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIM 105
TIYNMCTQKPPHDYSQQLY+KYRESFEEYITSMVLPSLR+KHDEFMLRELVKRWSNHK+M
Sbjct: 48 TIYNMCTQKPPHDYSQQLYEKYRESFEEYITSMVLPSLREKHDEFMLRELVKRWSNHKVM 107
Query: 106 VRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQ 165
VRWLSRFF YLDRYFISRRSL L +VGL+CFRDL+YQEIKG+VK AVI+LID+EREGEQ
Sbjct: 108 VRWLSRFFHYLDRYFISRRSLPQLSEVGLSCFRDLVYQEIKGKVKSAVISLIDQEREGEQ 167
Query: 166 IDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKA 225
IDRALLKNVL IFVEIGL SM+ YENDFEDFLLKDT DYYS+KAQ+WILEDSCPDYM+KA
Sbjct: 168 IDRALLKNVLDIFVEIGLTSMDYYENDFEDFLLKDTADYYSIKAQTWILEDSCPDYMLKA 227
Query: 226 EECLKKEKERVGHYLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLS 285
EECLK+EKERV HYLH SSEQKLLEKVQ+ELL QYA+ LLEKEHSGC ALLRDDK +DLS
Sbjct: 228 EECLKREKERVAHYLHSSSEQKLLEKVQHELLTQYASQLLEKEHSGCHALLRDDKVDDLS 287
Query: 286 RMYRLFSKINRGLEPIANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMVGMQEQVFVWK 345
RMYRLFS+I RGLEP++ +FK HVTNEGTALVKQAED+ASNKKPEKK++VG+QEQVFV K
Sbjct: 288 RMYRLFSRITRGLEPVSQIFKQHVTNEGTALVKQAEDAASNKKPEKKEIVGLQEQVFVRK 347
Query: 346 IIELHDKYVAYVTECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCS 405
IIELHDKYVAYVT+CFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKG S
Sbjct: 348 IIELHDKYVAYVTDCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGS 407
Query: 406 EKLSDEAIEDALEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQ 465
EKLSDEAIED LEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQ
Sbjct: 408 EKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQ 467
Query: 466 QCGGQFTSKMEGMVTDLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFD 525
QCGGQFTSKMEGMVTDLTVARDHQ KFEEF++ H ELNPGI LAVTVLTTGFWPSYK+FD
Sbjct: 468 QCGGQFTSKMEGMVTDLTVARDHQAKFEEFISTHSELNPGIALAVTVLTTGFWPSYKSFD 527
Query: 526 INLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLL 585
INLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLL
Sbjct: 528 INLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLL 587
Query: 586 LFNGSDRLTYSEIVTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKF 645
LFNG DRL+YSEIVTQLNLSDDDVVRLLHSLSCAKYKIL+KEP NRSISPNDVFEFNSKF
Sbjct: 588 LFNGVDRLSYSEIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPNNRSISPNDVFEFNSKF 647
Query: 646 TDRMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLS 705
TD++RR+KIPLPP RRYAIDASIVRIMKSRKV+GHQQLV ECVEQL
Sbjct: 648 TDKLRRLKIPLPPVDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLG 707
Query: 706 RMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
RMFKPDFKAIKKRIEDLITRDYLER+KDN NVYRYLA
Sbjct: 708 RMFKPDFKAIKKRIEDLITRDYLERDKDNPNVYRYLA 744
>Os01g0369200 Similar to Cullin-1
Length = 746
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/698 (64%), Positives = 561/698 (80%), Gaps = 1/698 (0%)
Query: 46 TIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIM 105
T+YNMCTQKPP+DYSQ LYD+Y+++ +++I S+VLPSL +KH F+LRE+V+RW HK+M
Sbjct: 49 TVYNMCTQKPPNDYSQVLYDRYKQALDDHIESVVLPSLNEKHGVFLLREIVQRWEKHKLM 108
Query: 106 VRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQ 165
VRWL RFF YLDRY+++RRSL L+ +G + FRDL++ ++K V +I +ID EREG
Sbjct: 109 VRWLRRFFDYLDRYYVTRRSLDSLKDLGWSSFRDLVFDKLKSTVATIMIGMIDDEREGNL 168
Query: 166 IDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKA 225
IDR LLKN L I+VEIG + Y +DFE L TTDYYS KAQ+WILE+SCP+YM+KA
Sbjct: 169 IDRPLLKNALDIYVEIGDSQLNYYSDDFEQSFLNGTTDYYSKKAQTWILENSCPEYMLKA 228
Query: 226 EECLKKEKERVGHYLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLS 285
EECL+KEK+RV +YLH ++E KL EL+ + A +L KE+SGC LL D+K EDL+
Sbjct: 229 EECLQKEKDRVANYLHSTTEPKLFAAALFELIDRRAEEILNKENSGCKVLLCDEKTEDLA 288
Query: 286 RMYRLFSKINRGLEPIANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMV-GMQEQVFVW 344
RM+RLFS+I GL P++ +FK HV EG +L+K A D+A+++K EKK +V G+ EQ FV
Sbjct: 289 RMFRLFSRITDGLLPVSKIFKEHVIAEGMSLLKHATDAANSRKDEKKGVVVGLPEQDFVR 348
Query: 345 KIIELHDKYVAYVTECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGC 404
+IELHDKY+AYVT CFQ +++FHKALKEAFEV CNK V G SSAEL A +CD+ILK+G
Sbjct: 349 SVIELHDKYMAYVTNCFQSNSVFHKALKEAFEVICNKDVVGCSSAELFAAYCDSILKRGG 408
Query: 405 SEKLSDEAIEDALEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLK 464
SEKLSDEAI+++LEKVV+LL Y+SDKDLF EF+RKKL RRLLFDK+ NDEHER +L+KLK
Sbjct: 409 SEKLSDEAIDESLEKVVKLLTYLSDKDLFVEFHRKKLGRRLLFDKNTNDEHERILLSKLK 468
Query: 465 QQCGGQFTSKMEGMVTDLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTF 524
Q GGQFTSKMEGM+ D+T+A++HQ+ FEE+V+ + E NP IDL VTVLTTG+WP+YK
Sbjct: 469 QFFGGQFTSKMEGMLKDITLAKEHQSSFEEYVSNNPESNPLIDLNVTVLTTGYWPTYKNS 528
Query: 525 DINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALL 584
DINLP EMVKCVEVFKE+Y++ +HRKLTWI+SLG C + F+AK +E ++ TYQAALL
Sbjct: 529 DINLPLEMVKCVEVFKEYYRSDKQHRKLTWIFSLGNCVVIGNFDAKPVEFVLNTYQAALL 588
Query: 585 LLFNGSDRLTYSEIVTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSK 644
LLFN +D+L+YS+IV+QL LSDDD VRLLHSLSCAKYKILNKEP+NR ISP D FEFNSK
Sbjct: 589 LLFNEADKLSYSDIVSQLKLSDDDAVRLLHSLSCAKYKILNKEPSNRVISPEDEFEFNSK 648
Query: 645 FTDRMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVMGHQQLVAECVEQL 704
FTDRMRRIK+PLP RR+AIDAS+VRIMKSRKV+GHQQLVAECVEQL
Sbjct: 649 FTDRMRRIKVPLPQIDEKKKVVDDVNKDRRFAIDASLVRIMKSRKVLGHQQLVAECVEQL 708
Query: 705 SRMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
SRMFKPD K IK+RIEDLI+R+YLER+ +NA Y+YLA
Sbjct: 709 SRMFKPDIKIIKRRIEDLISREYLERDSENAQTYKYLA 746
>AK110300
Length = 809
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/759 (37%), Positives = 442/759 (58%), Gaps = 78/759 (10%)
Query: 46 TIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIM 105
TIY MC QK PH ++ QLYD++ + EY+ VLP++ K EF+L+ELV+RW+NHK++
Sbjct: 67 TIYTMCIQKAPHCWTAQLYDRHELALVEYLDGTVLPAIEQKKGEFLLKELVQRWANHKLI 126
Query: 106 VRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQ 165
+W+ FF YL+R+++ R + PLE+V + F+ +Y+++KG+ AV+ LI ++R+GEQ
Sbjct: 127 KQWMCDFFRYLNRFYVKRHNKKPLEEVSILRFKTNVYKKVKGKACTAVLELIRRDRDGEQ 186
Query: 166 -IDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIK 224
+DR LL++ + IFV++G+G+ + Y+ DFE + + +YYS ++ W+ DSCP+Y+ K
Sbjct: 187 GVDRDLLRDAIAIFVDMGMGNGKTYQYDFEAAFIDHSANYYSRQSALWLSGDSCPEYLRK 246
Query: 225 AEECLKKEKERVGHYLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDL 284
AE + +EK RV YLH +++ L+E + LL ++ + LL+KE++G +L+ E+DL
Sbjct: 247 AEARILQEKRRVAEYLHSGTDEPLMETLYQTLLIRHQSELLDKENTGLRVMLKTHAEQDL 306
Query: 285 SRMYRLFSKINRGLEPIANMFKTHVTNEGTALVKQAEDSASNKKPEKKDMVGMQEQVFVW 344
+R++ L+S + L PIA + + AL+ + S + ++
Sbjct: 307 ARLFILYSPVPSSLPPIARTLNAFILDVAAALLDKCTASRTTATE------------YIP 354
Query: 345 KIIELHDKYVAYVT-ECFQGHTLFHKALKEAFEVFCNKGVSGSS---------------- 387
++I +H++Y V+ CF GH FH+ALK+AFE+ NK V +
Sbjct: 355 ELIRVHERYYDLVSGACFCGHATFHRALKDAFELIVNKKVLAAPAAPAAPAAPAPAAAPA 414
Query: 388 -------------------------------SAELLATFCDNILKKGCSEKLSDEAIEDA 416
+AELLA + D +L K +L ++ +E
Sbjct: 415 AAGAGAAAAGAGADAKAAGSSSSSAPAAPIHTAELLANYTDVLLNK-TGTRLDEKKLEST 473
Query: 417 LEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKME 476
L VVR+ +Y++DKDLF+EFYR L++RLL +SA+ + E+S++ KLK +CG QFTSK+E
Sbjct: 474 LNNVVRIFSYLTDKDLFSEFYRTLLSKRLLLGRSASTDAEKSLIGKLKLKCGAQFTSKLE 533
Query: 477 GMVTDLTVARDHQTKFEEFVAAHQ---ELNPGIDLAVTVLTTGFWPS--YKTFDINLPAE 531
GM+ D+ A DH F++F+ + ELN GID +V VLTTGFWP+ KT D+ LPA
Sbjct: 534 GMLNDMRNASDHNQSFKDFLRDKKRDSELN-GIDFSVQVLTTGFWPNGVSKTEDVKLPAA 592
Query: 532 MVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLLFNGSD 591
M C++VF+ FY T T +R LTW+++LG + F + +L+V+ QAA+LL FN +
Sbjct: 593 MQSCMDVFRAFYDTHTNNRVLTWLHNLGVVTLTGFFTKRKSDLVVSGVQAAILLQFNEHN 652
Query: 592 RLTYSEIVTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRR 651
L+ E+ L+ +++ L L KYK+L K PA P+ N F+D R
Sbjct: 653 DLSIEELAKVTGLTPENLKAQLRVLVSGKYKVLLKRPAE-GYKPDHRVSVNLAFSDAQLR 711
Query: 652 IKIPLPPXXXXXXXX--------XXXXXXRRYAIDASIVRIMKSRKVMGHQQLVAECVEQ 703
++IP P RR+A++A IVRIMK+RK + HQQL+ E +Q
Sbjct: 712 VRIP-PAMVVGGAVSEKEREKDVESVEEDRRHAVEACIVRIMKARKTLEHQQLMLEVSQQ 770
Query: 704 LSRMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
L + FKPD KAIKKRIEDLI R+YLER+ + Y Y+A
Sbjct: 771 LMQFFKPDPKAIKKRIEDLIAREYLERDAEKNTQYHYIA 809
>Os04g0643000 Similar to Cullin-3 (CUL-3). Splice isoform 2
Length = 731
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/706 (35%), Positives = 389/706 (55%), Gaps = 38/706 (5%)
Query: 46 TIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIM 105
T YN+ H + +LYDK E+ + ++ M S+ D L EL +RW++H
Sbjct: 55 TAYNLVL----HKHGLKLYDKLTENLKGHLKEMC-RSIEDAQGSLFLEELQRRWADHNKA 109
Query: 106 VRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQ--EIKGQVKGAVIALIDKEREG 163
++ + Y+DR FI+ P+ +GL +RD++ + +I G++ ++ LI +ER G
Sbjct: 110 LQMIRDILMYMDRTFIATNKKTPVFDLGLELWRDIVVRTPKIHGRLLDTLLELIHRERMG 169
Query: 164 EQIDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMI 223
E I+R L+++ + +++G Y +DFE L+ + +YS ++Q +I C +Y+
Sbjct: 170 EMINRGLMRSTTKMLMDLG---SSVYHDDFEKPFLEVSASFYSGESQQFIECCDCGEYLK 226
Query: 224 KAEECLKKEKERVGHYLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEED 283
KAE L +E ERV Y+ + K+ V E+LA + L+ E+SG +L DDK ED
Sbjct: 227 KAERRLAEELERVSQYMDAKTADKITSVVDTEMLANHMQRLILMENSGLVNMLVDDKHED 286
Query: 284 LSRMYRLFSKINRGLEPIANMFKTHVTNEGTALVKQAEDSASNKKPEK-KDMVGMQEQVF 342
LSRMY LF ++ G I ++ +HV G ALV PEK KD V F
Sbjct: 287 LSRMYNLFKRVPDGHSTIRSVMASHVKESGKALVSD---------PEKIKDPVE-----F 332
Query: 343 VWKIIELHDKYVAYVTECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKK 402
V +++ DKY ++ F F AL +FE F N + S E ++ F D+ L+K
Sbjct: 333 VQRLLNEKDKYDEIISISFSNDKAFQNALNSSFENFIN---LNNRSPEFISLFVDDKLRK 389
Query: 403 GCSEKLSDEAIEDALEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTK 462
G + ++E +E L+KV+ L Y+ +KD+F ++Y++ LA+RLL K+ +DE ERS+L K
Sbjct: 390 GV-KGANEEDVETVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTTSDEAERSMLVK 448
Query: 463 LKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYK 522
LK +CG QFTSK+EGM DL + D F ++ + +P I +V +LTTG WP+
Sbjct: 449 LKTECGYQFTSKLEGMFNDLKTSHDTMQSFYANLSGDTD-SPTI--SVQILTTGSWPTQP 505
Query: 523 TFDINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAA 582
LP E+V E F+ FY R+LTW ++G +I A F + EL V+TYQ
Sbjct: 506 CTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTNMGNADIKATFGGRRHELNVSTYQMC 565
Query: 583 LLLLFNGSDRLTYSEIVTQLNLSDDDVVRLLHSLSCAKYK-ILNKEPANRSISPNDVFEF 641
+L+LFN +D LTY +I + D+ R L SL+C K K +L KEP ++ IS +D F +
Sbjct: 566 VLMLFNSADGLTYGDIEQATGIPHADLKRCLQSLACVKGKNVLRKEPMSKDISEDDTFYY 625
Query: 642 NSKFTDRMRRIKIPL-----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVMGHQQL 696
N KFT ++ ++KI R+ I+A+IVRIMKSR+V+ H +
Sbjct: 626 NDKFTSKLVKVKIGTVVAQKETEPEKLETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSI 685
Query: 697 VAECVEQLSRMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
+ E +QL F P+ IKKRIE LI R++LER+K + +YRYLA
Sbjct: 686 ITEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKMYRYLA 731
>Os08g0170900 Cullin family protein
Length = 731
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 260/749 (34%), Positives = 404/749 (53%), Gaps = 47/749 (6%)
Query: 9 HQAEEHPRGQARATVQLRGLHDAL-----HVRXXXXXXXXXGTIYNMCTQKPPHDYSQQL 63
H+ E PR +A R L DA+ H T YN+ H + +L
Sbjct: 15 HKVETDPRFFEKA---WRKLDDAIREIYNHNASGLSFEELYRTAYNLVL----HKHGPKL 67
Query: 64 YDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYFISR 123
YDK E+ E+++ M + S+ L EL ++W +H ++ + Y+DR FI
Sbjct: 68 YDKLTENMEDHLQEMRV-SIEAAQGGLFLVELQRKWDDHNKALQMIRDILMYMDRVFIPT 126
Query: 124 RSLIPLEQVGLTCFRDLIYQ--EIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVEI 181
P+ +GL +RD I + +I G++ ++ LI +ER GE I+R+L+++ + +++
Sbjct: 127 NKKTPVFDLGLDLWRDTIVRSPKIHGRLLDTLLDLIHRERTGEVINRSLMRSTTKMLMDL 186
Query: 182 GLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAEECLKKEKERVGHYLH 241
G Y++DFE L+ + +YS ++Q +I SC +Y+ KA++ L +E ERV Y+
Sbjct: 187 GSS---VYQDDFERPFLEVSASFYSGESQKFIECCSCGEYLKKAQQRLDEEAERVSQYMD 243
Query: 242 ISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEEDLSRMYRLFSKINRGLEPI 301
+++K+ V E+LA + L+ E+SG +L +DK EDL+ MY LF ++ G I
Sbjct: 244 AKTDEKITAVVVKEMLANHMQRLILMENSGLVNMLVEDKYEDLTMMYSLFQRVPDGHSTI 303
Query: 302 ANMFKTHVTNEGTALVKQAEDSASNKKPEK-KDMVGMQEQVFVWKIIELHDKYVAYVTEC 360
++ +HV G +V PE+ KD V FV +++ DKY + VT
Sbjct: 304 KSVMNSHVKETGKDMVMD---------PERLKDPVD-----FVQRLLNEKDKYDSIVTTS 349
Query: 361 FQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALEKV 420
F F AL +FE F N + E ++ + D+ L+KG E ++E +E L+KV
Sbjct: 350 FSNDKSFQNALNSSFEHFIN---LNNRCPEFISLYVDDKLRKGMKEA-NEEDVETVLDKV 405
Query: 421 VRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT 480
+ L Y+ +KDLF ++Y++ LA+RLL K+A+D+ ERS+L KLK +CG QFTSK+EGM
Sbjct: 406 MMLFRYLQEKDLFEKYYKQHLAKRLLSGKAASDDSERSMLVKLKTECGYQFTSKLEGMFN 465
Query: 481 DLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEVFK 540
DL + D + F A +L ++V +LTTG WP+ NLP E++ E+F+
Sbjct: 466 DLKTSHDTT---QRFYAGTPDLGDAPTISVQILTTGSWPTQPCNTCNLPPEILGVSEMFR 522
Query: 541 EFYQTRTKHRKLTWIYSLGTCNINAKF-EAKTIELIVTTYQAALLLLFNGSDRLTYSEIV 599
FY R+LTW ++GT +I A F EL V+TYQ +L+LFN +D L+Y +I
Sbjct: 523 GFYLGTHNGRRLTWQTNMGTADIKAVFGNGSKHELNVSTYQMCVLMLFNSADCLSYRDIE 582
Query: 600 TQLNLSDDDVVRLLHSLSCAKYK-ILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP 658
+ D+ R L SL+ K K +L KEP +R IS +D F N KFT ++ ++KI
Sbjct: 583 QTTAIPSADLKRCLQSLALVKGKNVLRKEPMSRDISDDDNFYVNDKFTSKLFKVKIGTVA 642
Query: 659 XXXXXXXXXXXXXX-----RRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFK 713
R+ I+A+IVRIMKSR+V+ H +V E +QL F P+
Sbjct: 643 TQKESEPEKMETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQPRFMPNPV 702
Query: 714 AIKKRIEDLITRDYLEREKDNANVYRYLA 742
IKKR+E LI R++LER+K + +YRYLA
Sbjct: 703 VIKKRVESLIEREFLERDKTDRKLYRYLA 731
>Os02g0746000 Similar to Cullin-3 (CUL-3). Splice isoform 3
Length = 736
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/707 (34%), Positives = 388/707 (54%), Gaps = 38/707 (5%)
Query: 46 TIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIM 105
+ YNM H Y ++LYD + + + S+ L EL +W +H
Sbjct: 58 SAYNMVL----HKYGEKLYDGLERTMTWRLKE-ISKSIEAAQGGLFLEELNAKWMDHNKA 112
Query: 106 VRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQE--IKGQVKGAVIALIDKEREG 163
++ + Y+DR ++ + P+ ++GL +RD I I ++ ++ LI +ER G
Sbjct: 113 LQMIRDILMYMDRTYVPQSRRTPVHELGLNLWRDHIIHSPMIHSRLLDTLLDLIHRERMG 172
Query: 164 EQIDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMI 223
E I+R L++++ + +++G Y++DFE L T +YS ++Q +I C +Y+
Sbjct: 173 EMINRGLMRSITKMLMDLGAA---VYQDDFEKPFLDVTASFYSGESQEFIECCDCGNYLK 229
Query: 224 KAEECLKKEKERVGHYLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCFALLRDDKEED 283
K+E L +E ERV HYL +E K+ V+ E++A + L+ E+SG +L DDK +D
Sbjct: 230 KSERRLNEEMERVSHYLDSGTEAKITSVVEKEMIANHMHRLVHMENSGLVNMLVDDKYDD 289
Query: 284 LSRMYRLFSKINRGLEPIANMFKTHVTNEGTALVKQAEDSASNKKPEK-KDMVGMQEQVF 342
L+RMY LF ++ GL I ++ +++ G LV PE+ KD V F
Sbjct: 290 LARMYNLFRRVFDGLSTIRDVMTSYLRETGKQLVTD---------PERLKDPVE-----F 335
Query: 343 VWKIIELHDKYVAYVTECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKK 402
V +++ DK+ + F F AL +FE F N + S E ++ + D+ L+K
Sbjct: 336 VQRLLNEKDKHDKIINVAFGNDKTFQNALNSSFEYFIN---LNNRSPEFISLYVDDKLRK 392
Query: 403 GCSEKLSDEAIEDALEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTK 462
G + ++E +E L+KV+ L Y+ +KD+F ++Y++ LA+RLL K+ +D+ ERS++ K
Sbjct: 393 GL-KGATEEDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSMIVK 451
Query: 463 LKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFVAAHQELNPGIDLAVTVLTTGFWPSYK 522
LK +CG QFTSK+EGM TD+ ++D F + +EL G L V +LTTG WP+
Sbjct: 452 LKTECGYQFTSKLEGMFTDMKTSQDTMIDF--YAKKSEELGDGPTLDVHILTTGSWPTQP 509
Query: 523 TFDINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKF-EAKTIELIVTTYQA 581
NLP E++ + F+ +Y R+LTW ++GT +I A F + + EL V+TYQ
Sbjct: 510 CPPCNLPTEILAICDKFRTYYLGTHSGRRLTWQTNMGTADIKATFGKGQKHELNVSTYQM 569
Query: 582 ALLLLFNGSDRLTYSEIVTQLNLSDDDVVRLLHSLSCAKYK-ILNKEPANRSISPNDVFE 640
+L+LFN +D LTY +I + D+ R L SL+C K K +L KEP ++ IS +D F
Sbjct: 570 CVLMLFNSTDGLTYKDIEQDTAIPASDLKRCLQSLACVKGKNVLRKEPMSKDISEDDTFY 629
Query: 641 FNSKFTDRMRRIKIPL-----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVMGHQQ 695
FN KFT ++ ++KI R+ I+A+IVRIMKSR+V+ H
Sbjct: 630 FNDKFTSKLVKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNS 689
Query: 696 LVAECVEQLSRMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
+VAE +QL F P+ IKKRIE LI R++LER+K + +YRYLA
Sbjct: 690 IVAEVTKQLQARFMPNPVVIKKRIESLIEREFLERDKADRKLYRYLA 736
>Os12g0236250
Length = 237
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 6/184 (3%)
Query: 78 MVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYFISRRSLIPLEQVGLTCF 137
MVLPS+R + E +L+ LV RW NHK +V +RFFFYLDRY+I R+SL+PLEQ+ L F
Sbjct: 44 MVLPSMRQINGETLLKGLVDRWRNHKKIVISETRFFFYLDRYYILRKSLVPLEQLNLCSF 103
Query: 138 RDLIYQEIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVEIGLGSMECYENDFEDFL 197
RD +Y E+K ++ V+ +I+ ER+G+ IDR LLK+VL ++V+IGLG MECYE DFE+
Sbjct: 104 RDQVYSELKDKITRTVVDMINDERDGKVIDRDLLKDVLDVYVQIGLG-MECYEVDFENAF 162
Query: 198 LKDTTDYYSLKAQSWILE----DSCPDYMIKAEECLKKEKERVGHYLHISSEQKLLEKVQ 253
+ T +YYS KAQ+ ILE DS P+YM+KA ECL+ E ERV HYLH S+E KL++ +Q
Sbjct: 163 RESTRNYYSNKAQTSILECNGADS-PEYMLKAVECLQAELERVSHYLHSSTEPKLMQDLQ 221
Query: 254 NELL 257
+EL+
Sbjct: 222 SELM 225
>Os05g0193900
Length = 406
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 110/201 (54%), Gaps = 47/201 (23%)
Query: 47 IYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMV 106
+Y MCTQK DY ++LY +++ ++++ S+VLPSL +KH F+L E+++ W HK+MV
Sbjct: 92 VYYMCTQKGHKDYPKELYHLCKQALDDHLDSIVLPSLNEKHGNFLLAEMLQSWEKHKLMV 151
Query: 107 RWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQI 166
RWL RFF YLDR I+ +SL LE +G FRD +I+ ER G I
Sbjct: 152 RWLRRFFDYLDRVSITWKSLHSLEHMGWIGFRD----------------MINDERNGLLI 195
Query: 167 DRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAE 226
DRALLKNV+ + E G + Y P+Y++KAE
Sbjct: 196 DRALLKNVIHMCNEFGDSELNSY-----------------------------PEYILKAE 226
Query: 227 ECLKKEKERVGHYLHISSEQK 247
ECL+KEKE+V Y H ++E K
Sbjct: 227 ECLQKEKEQV--YSHSTTEPK 245
>Os01g0935300 Cullin family protein
Length = 300
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 135/258 (52%), Gaps = 17/258 (6%)
Query: 48 YNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVR 107
Y M QK Y Q++Y+ Y+ + E + +MVLP L K + RELVK WSN+ M+R
Sbjct: 46 YRMAVQKD--QYCQEMYNSYKATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIR 103
Query: 108 WLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLIYQEIKGQVKGAVIALIDKEREGEQID 167
+ + F YLDR F++ + L LE T F ++ ++ ++ LI +ER+G +D
Sbjct: 104 FTTGFLAYLDRCFVTHKKLPSLEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVD 163
Query: 168 RALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSCPDYMIKAEE 227
LL +GI I + + + +++DT YYS K+ WI++ DY+ K +E
Sbjct: 164 MDLL---MGIMRGICRSEV---KTKLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQE 217
Query: 228 CLKKEKERVGHYLHISSEQK---LLEKVQNELLAQYATPLLEKEHSGCFALLRDDK--EE 282
++KE +R+ HYL IS E+ L+ V L+ Y EK H G LL+ K E+
Sbjct: 218 TVQKEMKRLIHYLCISEEEGSGLCLKAVSAPLMQAYENYTKEK-HIGGQVLLQTYKTVED 276
Query: 283 D-LSRMYRLFSKINRGLE 299
D L R RL I+ GL+
Sbjct: 277 DLLDRCSRL--TIDNGLD 292
>Os03g0786800 Similar to Cullin-4A (CUL-4A)
Length = 155
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 590 SDRLTYSEIVTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRM 649
+ +L++ +I + D ++ R L SL+C K ++L K P R + D F FN +F+ +
Sbjct: 1 AQKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPL 60
Query: 650 RRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVMGHQQLVAECVEQLS 705
RIK+ R+Y +DA+IVRIMK+RK + H L+ E +QL
Sbjct: 61 YRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK 120
Query: 706 RMFKPDFKAIKKRIEDLITRDYLEREKDNANVYRYLA 742
KP IKKRIE LI R+YLER++ N +Y YLA
Sbjct: 121 FPIKPS--DIKKRIESLIDREYLERDRSNPQIYNYLA 155
>Os04g0484800 Cullin family protein
Length = 864
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 423 LLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDL 482
+++ I KD YR LA +LL + + + L LK G K E M+ DL
Sbjct: 532 IVSIIGSKDQLVNEYRVMLAEKLLNKSDFDIDSDIRTLELLKIHFGESSMQKCEIMLNDL 591
Query: 483 ------------TVARDHQTKF---EEFVAAHQELNPGIDLAVTVLTTGFWPSYKTFDIN 527
++++ QT EE +H+ L+ T++++ FWP +T D+
Sbjct: 592 IDSKRTNSNIKTSLSKTSQTVGTVQEETELSHEVLD------ATIISSNFWPPIQTEDLT 645
Query: 528 LPAEMVKCVEVF-KEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLL 586
+PA + + + + K F+Q +T RKL W +LGT + +FE ++++ V AA+++
Sbjct: 646 VPASVDQLLSDYAKRFHQIKTP-RKLLWKKNLGTVKLELQFEDRSMQFTVAPVHAAIIMQ 704
Query: 587 FNGSDRLTYSEIVTQLNLSDDDVVR 611
F T + T + + D + R
Sbjct: 705 FQEKPSWTSKTLATAIGVPVDSLNR 729
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,609,643
Number of extensions: 882223
Number of successful extensions: 2106
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2070
Number of HSP's successfully gapped: 13
Length of query: 742
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 634
Effective length of database: 11,396,689
Effective search space: 7225500826
Effective search space used: 7225500826
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 160 (66.2 bits)