Os03g0786800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cullin-4A (CUL-4A).
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Os03g0786800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cullin-4A (CUL-4A).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.98 | 0.176 | 12.9 | 1.1 | 0.35 | -0.359 | -0.00381 | 1.31 | 0.438 | 21.6 | 9.85 | 1146 | -- | -- |
| 15.32 | 0.182 | 13 | 0.876 | 0.334 | -0.329 | 0.105 | -- | 0.371 | 21.3 | 12.69 | 4852 | -- | -- |
| 13.98 | 0.174 | 12.9 | 1.1 | 0.35 | -0.359 | -- | 1.31 | 0.438 | 21.6 | 9.828 | 1147 | -- | -- |
| 15.36 | 0.183 | 13 | 0.876 | 0.334 | -0.332 | -- | -- | 0.371 | 21.3 | 12.69 | 4896 | -- | -- |
| 20.23 | 0.209 | 12.9 | 1.1 | -- | -0.321 | -- | 1.28 | 0.437 | -- | 12.55 | 1469 | -- | -- |
| 17.25 | 0.195 | 13 | 0.723 | 0.321 | -- | 0.094 | -- | 0.306 | 21.3 | -- | -- | -- | -- |
| 17.29 | 0.195 | 13 | 0.72 | 0.321 | -- | -- | -- | 0.306 | 21.2 | -- | -- | -- | -- |
| 20.97 | 0.214 | 12.9 | 0.794 | -- | -0.399 | -- | -- | 0.357 | -- | 12.55 | 1469 | -- | -- |
| 24.31 | 0.23 | 13 | -- | 0.317 | 0.399 | -- | -- | 0.097 | 21.1 | 16.08 | 47520 | -- | -- |
| 23.27 | 0.225 | 13 | 0.721 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 30.94 | 0.26 | 13 | -- | 0.321 | -- | -- | -- | 0.225 | 21.4 | -- | -- | -- | -- |
| 30.1 | 0.256 | 13 | -- | -- | 0.404 | -- | -- | 0.0919 | -- | 16.3 | 47520 | -- | -- |
| 36.99 | 0.284 | 13 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.68 | temperature | 15 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 5 | 13.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 10 |
| 28 | 13.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 53 | 13.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 125 | 13.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 225 | 13.88 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 270 | 13.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 272 | 13.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 327 | 13.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 353 | 13.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 385 | 13.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 404 | 13.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 430 | 13.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 482 | 14.01 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 495 | 14.02 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 518 | 14.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 717 | 14.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 19 |
| 733 | 14.11 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 777 | 14.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 780 | 14.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 812 | 14.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 814 | 14.13 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 827 | 14.13 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 830 | 14.13 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 872 | 14.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 873 | 14.14 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 900 | 14.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 906 | 14.15 | humidity | 60 | 43200 | > th | dose independent | sin | 15 | NA |
| 909 | 14.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 943 | 14.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 954 | 14.16 | humidity | 60 | 43200 | < th | dose independent | sin | 15 | NA |
| 956 | 14.16 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 962 | 14.16 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 965 | 14.16 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 967 | 14.16 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 21 |
| 974 | 14.16 | humidity | 60 | 43200 | < th | dose independent | rect. | 13 | 22 |