BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0786800 Os03g0786800|AK059186
(155 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46210.1 | chr5:18731569-18736653 REVERSE LENGTH=793 288 7e-79
AT1G26830.1 | chr1:9296063-9298374 FORWARD LENGTH=733 132 8e-32
AT1G69670.1 | chr1:26202169-26204442 REVERSE LENGTH=733 130 3e-31
AT4G02570.1 | chr4:1129315-1133435 FORWARD LENGTH=739 119 6e-28
AT1G02980.1 | chr1:677869-681212 FORWARD LENGTH=743 117 2e-27
AT1G43140.1 | chr1:16232785-16236109 FORWARD LENGTH=722 113 4e-26
>AT5G46210.1 | chr5:18731569-18736653 REVERSE LENGTH=793
Length = 792
Score = 288 bits (738), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 140/155 (90%), Positives = 148/155 (95%)
Query: 1 AQKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPL 60
A KLSF DIK+ST IEDKELRRTLQSLACGKVRVLQK PKGRDVED DEF FN+EF+APL
Sbjct: 638 AMKLSFEDIKDSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPL 697
Query: 61 YRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK 120
YRIKVNAIQMKETVEENTSTTERVFQDRQYQ+DAAIVRIMKTRK LSHTLLITELFQQLK
Sbjct: 698 YRIKVNAIQMKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLK 757
Query: 121 FPIKPSDIKKRIESLIDREYLERDRSNPQIYNYLA 155
FPIKP+D+KKRIESLIDREYLER++SNPQIYNYLA
Sbjct: 758 FPIKPADLKKRIESLIDREYLEREKSNPQIYNYLA 792
>AT1G26830.1 | chr1:9296063-9298374 FORWARD LENGTH=733
Length = 732
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 114/159 (71%), Gaps = 4/159 (2%)
Query: 1 AQKLSFLDIKESTGIEDKELRRTLQSLACGKVR-VLQKMPKGRDVEDKDEFVFNEEFSAP 59
+ +LS+ +I+++T I +L+R LQSLAC K + V++K P +D+ ++D FV N++F++
Sbjct: 574 SDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSK 633
Query: 60 LYRIKVN-AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 118
Y++K+ + KET E T +RV +DR+ Q++AAIVRIMK+RK L H +I E+ +Q
Sbjct: 634 FYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQ 693
Query: 119 L--KFPIKPSDIKKRIESLIDREYLERDRSNPQIYNYLA 155
L +F P++IKKRIESLI+R++LERD ++ ++Y YLA
Sbjct: 694 LQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732
>AT1G69670.1 | chr1:26202169-26204442 REVERSE LENGTH=733
Length = 732
Score = 130 bits (326), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 113/159 (71%), Gaps = 4/159 (2%)
Query: 1 AQKLSFLDIKESTGIEDKELRRTLQSLACGKVR-VLQKMPKGRDVEDKDEFVFNEEFSAP 59
+ +LS+ +I+++T I +L+R LQS+AC K + VL+K P +++ ++D FV N+ F++
Sbjct: 574 SDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASK 633
Query: 60 LYRIKVN-AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 118
Y++K+ + KET E T +RV +DR+ Q++AAIVRIMK+R+ L H +I E+ +Q
Sbjct: 634 FYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQ 693
Query: 119 L--KFPIKPSDIKKRIESLIDREYLERDRSNPQIYNYLA 155
L +F P++IKKRIESLI+R++LERD ++ ++Y YLA
Sbjct: 694 LQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732
>AT4G02570.1 | chr4:1129315-1133435 FORWARD LENGTH=739
Length = 738
Score = 119 bits (298), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 3 KLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPLYR 62
KLS+ +I + ++L R L SL+C K ++L K P + V D F FN +F+ + R
Sbjct: 588 KLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRR 647
Query: 63 IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFP 122
IK+ V+E E V +DR+Y +DAAIVRIMK+RK L H L++E +QL
Sbjct: 648 IKIPL----PPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRM 703
Query: 123 IKPS--DIKKRIESLIDREYLERDRSNPQIYNYLA 155
KP IKKR+E LI R+YLERD+ NP ++ YLA
Sbjct: 704 FKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
>AT1G02980.1 | chr1:677869-681212 FORWARD LENGTH=743
Length = 742
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 2 QKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPLY 61
++LS+ +I E + ++L R L SL+C K ++L K P R++ + D F FN +F+ +
Sbjct: 591 ERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMR 650
Query: 62 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 121
RI+V M +E E V +DR+Y +DAA+VRIMK+RK L H L++E + L
Sbjct: 651 RIRVPLPPM----DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSK 706
Query: 122 PIKPS--DIKKRIESLIDREYLERDRSNPQIYNYLA 155
KP IKKRIE LI R+YLERD NP + YLA
Sbjct: 707 MFKPDIKMIKKRIEDLISRDYLERDTDNPNTFKYLA 742
>AT1G43140.1 | chr1:16232785-16236109 FORWARD LENGTH=722
Length = 721
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 6/157 (3%)
Query: 1 AQKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPL 60
A++LS+ +I E + ++L R L SL+C K ++L K P R + D F FN +F+ +
Sbjct: 569 AERLSYTEISEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKM 628
Query: 61 YRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK 120
+I+V M +E E V +DR+Y +DAA+VRIMK+RK L+H L++E + L
Sbjct: 629 RKIRVPLPPM----DERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLS 684
Query: 121 FPIKPS--DIKKRIESLIDREYLERDRSNPQIYNYLA 155
KP IKKRIE LI+R+YLERD N + Y+A
Sbjct: 685 KMFKPDIKMIKKRIEDLINRDYLERDTENANTFKYVA 721
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,032,059
Number of extensions: 113909
Number of successful extensions: 380
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 6
Length of query: 155
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 65
Effective length of database: 8,639,129
Effective search space: 561543385
Effective search space used: 561543385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 107 (45.8 bits)