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Os01g0935300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cullin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.84 (0.0237) R2 : 0.766
β1 : 1.38 (0.0867) R2dD : 0.134 R2D : 0.106
β2 : 2.19 (0.0616) R2dC : 0.653 R2C : 0.632
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.249 (0.0506) R2dN8 : 0.0167 R2N8 : -0.00959
σ : 0.445
deviance : 90.46
__
_____
C
peak time of C : 17.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.45 0.405 7.82 1.46 2.17 0.549 1.38 -0.512 0.37 17.4 19.98 1348 -- --
75.05 0.403 7.82 1.43 2.16 0.539 1.38 -- 0.359 17.4 19.99 1347 -- --
79.19 0.414 7.82 1.46 2.17 0.554 -- -0.453 0.369 17.4 19.97 1347 -- --
79.23 0.415 7.82 1.43 2.17 0.542 -- -- 0.352 17.4 28.11 1302 -- --
323.33 0.837 7.82 1.42 -- 0.697 -- -0.065 0.328 -- 26.65 1341 -- --
85.38 0.433 7.84 1.38 2.19 -- 1.42 -- 0.242 17.2 -- -- -- --
90.46 0.445 7.84 1.38 2.19 -- -- -- 0.249 17.2 -- -- -- --
323.27 0.837 7.82 1.42 -- 0.72 -- -- 0.305 -- 27.17 1336 -- --
124.53 0.52 7.84 -- 2.29 0.823 -- -- 0.357 17.5 19.99 6534 -- --
342.2 0.864 7.81 1.3 -- -- -- -- 0.194 -- -- -- -- --
140.31 0.554 7.88 -- 2.17 -- -- -- 0.0959 17.3 -- -- -- --
365.92 0.891 7.81 -- -- 0.635 -- -- 0.231 -- 29.96 20050 -- --
386.71 0.918 7.85 -- -- -- -- -- 0.0499 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.41 wind 5.0 270 < th dose independent rect. 3 2
2 64.73 precipitation 0.1 270 < th dose independent rect. 3 2
3 64.73 precipitation 0.1 270 < th dose dependent rect. 3 2
5 65.62 wind 9.0 270 < th dose dependent rect. 3 2
8 65.75 wind 9.0 270 < th dose independent rect. 5 22
14 66.08 radiation 1.0 270 < th dose dependent rect. 3 2
15 66.12 wind 5.0 30 < th dose independent rect. 4 4
17 66.15 temperature 10.0 270 > th dose independent rect. 3 2
19 66.15 temperature 30.0 270 < th dose independent rect. 3 2
20 66.15 humidity 50.0 270 > th dose independent rect. 3 2
23 66.15 atmosphere 995.0 270 > th dose independent rect. 3 2
24 66.15 atmosphere 1010.0 270 < th dose independent rect. 3 2
26 66.15 radiation 20.0 270 < th dose independent rect. 3 2
29 66.15 temperature 10.0 270 > th dose independent rect. 5 22
30 66.17 radiation 30.0 270 < th dose dependent rect. 3 2
34 66.23 radiation 1.0 270 < th dose independent rect. 3 2
44 66.45 wind 9.0 10 < th dose independent rect. 8 20
45 66.48 precipitation 0.1 10 < th dose independent rect. 4 4
46 66.48 precipitation 0.1 10 < th dose dependent rect. 4 4
58 66.65 temperature 10.0 30 > th dose independent rect. 4 4
60 66.65 temperature 30.0 30 < th dose independent rect. 4 4
61 66.65 humidity 50.0 30 > th dose independent rect. 4 4
63 66.65 atmosphere 995.0 30 > th dose independent rect. 4 4
64 66.65 atmosphere 1015.0 30 < th dose independent rect. 4 4
65 66.65 temperature 10.0 30 > th dose independent rect. 8 20
80 66.77 precipitation 0.1 30 < th dose independent rect. 8 20
82 66.77 precipitation 0.1 30 < th dose dependent rect. 8 20
83 66.82 radiation 40.0 30 < th dose independent rect. 4 4
86 66.86 atmosphere 995.0 30 > th dose independent rect. 8 20
87 66.86 wind 9.0 90 < th dose dependent rect. 3 5
92 66.94 wind 9.0 10 < th dose dependent rect. 4 4
110 67.01 precipitation 0.1 270 < th dose independent rect. 5 22
111 67.01 precipitation 0.1 270 < th dose dependent rect. 5 22
134 67.13 atmosphere 1000.0 10 > th dose dependent rect. 4 4
143 67.19 humidity 50.0 270 > th dose dependent rect. 3 2
204 67.62 atmosphere 1000.0 270 > th dose dependent rect. 3 2
206 67.64 temperature 10.0 10 > th dose dependent rect. 4 4
229 67.77 atmosphere 995.0 270 > th dose independent rect. 6 21
231 67.77 radiation 1.0 270 < th dose dependent rect. 3 6
240 67.84 temperature 10.0 270 > th dose dependent rect. 3 2
311 68.36 atmosphere 1005.0 270 > th dose independent rect. 3 2
315 68.36 wind 9.0 90 < th dose dependent rect. 8 20
370 68.64 atmosphere 1005.0 30 > th dose independent rect. 4 4
377 68.69 radiation 1.0 270 < th dose dependent rect. 3 15
386 68.83 wind 1.0 270 > th dose independent rect. 3 2
426 69.12 temperature 30.0 270 < th dose dependent rect. 3 2
447 69.40 atmosphere 1000.0 270 > th dose independent rect. 21 5
459 69.50 humidity 50.0 10 > th dose independent rect. 8 20
461 69.53 wind 9.0 270 < th dose dependent rect. 6 20
472 69.58 wind 9.0 1440 < th dose independent rect. 5 4
473 69.58 temperature 10.0 1440 > th dose independent rect. 5 4
476 69.58 humidity 50.0 1440 > th dose independent rect. 5 4
478 69.58 atmosphere 995.0 1440 > th dose independent rect. 5 4
479 69.58 atmosphere 1015.0 1440 < th dose independent rect. 5 4
480 69.58 temperature 10.0 1440 > th dose independent rect. 9 20
488 69.62 atmosphere 1000.0 10 > th dose independent rect. 22 6
495 69.69 radiation 1.0 270 < th dose independent rect. 3 14
508 69.77 humidity 50.0 270 > th dose dependent rect. 20 6
513 69.79 atmosphere 1000.0 270 > th dose independent rect. 22 3
565 69.94 atmosphere 1015.0 30 < th dose independent rect. 8 20
568 69.98 wind 1.0 270 > th dose independent rect. 2 4
598 70.08 wind 7.0 270 < th dose independent rect. 6 9
610 70.12 humidity 60.0 30 > th dose dependent rect. 22 6
626 70.19 radiation 1.0 270 < th dose independent rect. 2 17
631 70.22 precipitation 0.1 270 < th dose independent rect. 2 18
633 70.22 precipitation 0.1 270 < th dose dependent rect. 2 18
644 70.29 humidity 60.0 270 > th dose dependent rect. 22 3
682 70.35 atmosphere 995.0 270 > th dose independent rect. 6 9
691 70.39 temperature 30.0 30 < th dose dependent rect. 4 4
692 70.40 radiation 1.0 10 > th dose independent rect. 5 3
703 70.40 precipitation 0.1 270 < th dose independent rect. 15 15
708 70.40 precipitation 0.1 270 < th dose dependent rect. 15 15
736 70.50 precipitation 0.1 270 < th dose independent rect. 6 9
738 70.50 precipitation 0.1 270 < th dose dependent rect. 6 9
751 70.56 temperature 10.0 270 > th dose independent rect. 6 9
752 70.56 atmosphere 1015.0 270 < th dose independent rect. 6 9
753 70.56 temperature 10.0 270 > th dose independent rect. 15 15
756 70.57 atmosphere 1015.0 270 < th dose dependent rect. 3 2
836 70.74 precipitation 0.1 270 < th dose independent rect. 20 6
838 70.74 precipitation 0.1 270 < th dose dependent rect. 20 6
841 70.75 radiation 40.0 270 < th dose independent rect. 15 15
851 70.78 humidity 50.0 270 > th dose independent rect. 6 20
858 70.81 temperature 10.0 270 > th dose independent rect. 20 6
859 70.81 temperature 30.0 270 < th dose independent rect. 20 6
860 70.81 humidity 50.0 270 > th dose independent rect. 20 6
864 70.81 radiation 1.0 270 < th dose independent rect. 20 6
870 70.81 temperature 10.0 270 > th dose independent rect. 2 18
871 70.81 atmosphere 1015.0 270 < th dose independent rect. 2 18
874 70.81 radiation 1.0 270 < th dose dependent rect. 20 6
879 70.82 wind 9.0 270 < th dose independent rect. 20 6
901 70.89 wind 9.0 270 < th dose independent rect. 15 15
903 70.90 wind 9.0 10 < th dose dependent rect. 22 6
928 70.94 temperature 10.0 90 > th dose independent rect. 4 17
929 70.94 atmosphere 1015.0 90 < th dose independent rect. 4 17
956 70.99 radiation 40.0 270 < th dose dependent rect. 15 15
982 71.03 atmosphere 1015.0 10 < th dose dependent rect. 4 4