BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0935300 Os01g0935300|AK064133
(300 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43140.1 | chr1:16232785-16236109 FORWARD LENGTH=722 150 1e-36
AT4G02570.1 | chr4:1129315-1133435 FORWARD LENGTH=739 144 7e-35
AT1G59790.1 | chr1:22001504-22003385 FORWARD LENGTH=375 138 4e-33
AT1G02980.1 | chr1:677869-681212 FORWARD LENGTH=743 127 5e-30
AT1G59800.1 | chr1:22004964-22006172 FORWARD LENGTH=256 112 3e-25
AT1G26830.1 | chr1:9296063-9298374 FORWARD LENGTH=733 63 2e-10
AT1G69670.1 | chr1:26202169-26204442 REVERSE LENGTH=733 51 9e-07
>AT1G43140.1 | chr1:16232785-16236109 FORWARD LENGTH=722
Length = 721
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 11/300 (3%)
Query: 1 MNEHLRFEDGWKILEQGIVKCSKLLEDCPGGRPTVNEYMNYYDCAYRMAVQK--DQYCQE 58
M E + E+GW +++ G+ K ++LED +Y+N Y Y M +Q+ + Y QE
Sbjct: 11 MKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQE 70
Query: 59 MYNSYKATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVT 118
+YN Y+ + VLP + + G+ RELVK W+N+ ++R+ + F YLDR +V
Sbjct: 71 LYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYVA 130
Query: 119 HKKLPSLEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMRGICRSE 178
+ LP+L D TSF V+ +E DVLL LI +ER+G +D L+ ++ C +
Sbjct: 131 RRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNG 190
Query: 179 V------KTKLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYLCI 232
V + +S ++QDT YYSRK+ W + DY+ K +E ++ E +R+ +YL
Sbjct: 191 VGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHS 250
Query: 233 SEEEGSGLCLKAVSAPLMQAYENYTKEKHIGGQVLLQTYKTVEDDLLDRCSRLTIDNGLD 292
+ E L K + L+ + + +H G LL+ K + + R RL I GL+
Sbjct: 251 TTE--PKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRL-IPQGLE 307
>AT4G02570.1 | chr4:1129315-1133435 FORWARD LENGTH=739
Length = 738
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 18/288 (6%)
Query: 7 FEDGWKILEQGIVKCSKLLEDCPGGRPTVNEYMNYYDCAYRMAVQKD--QYCQEMYNSYK 64
E GW ++ GI K ++LE +YM Y Y M QK Y Q++Y+ Y+
Sbjct: 8 LEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYR 67
Query: 65 ATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKKLPS 124
E + + VLP L K + REL K WSN+ M+R+ + F YLDR F+ + LP
Sbjct: 68 EAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPP 127
Query: 125 LEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMR-----GICRSE- 178
L + T F V++ ++++ ++ L+ +ER+G +D LL ++ G+ + E
Sbjct: 128 LNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMER 187
Query: 179 VKTKLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYLCISEEEGS 238
+ +S ++QDT YYSRK+ WI + DY+ K +E ++KE +R+ HYL S E
Sbjct: 188 YEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPK- 246
Query: 239 GLCLKAVSAPLMQAYENYTKEK-HIGGQVLLQTYKTVEDDLLDRCSRL 285
++ V L+ + + EK H G + LL+ DD +D SR+
Sbjct: 247 --LVEKVQHELLVVFASQLLEKEHSGCRALLR------DDKVDDLSRM 286
>AT1G59790.1 | chr1:22001504-22003385 FORWARD LENGTH=375
Length = 374
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 12/275 (4%)
Query: 4 HLRFEDGWKILEQGIVKCSKLLEDCPGGRPTVNEYMNYYDCAYRMAVQKDQYCQEMYNSY 63
++FE+GW +++GI K ++LE P +E Y Y M VQ+ Y Q++Y Y
Sbjct: 11 QIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQLYEKY 70
Query: 64 KATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKK-- 121
+ E VLP L K + RELVK W+N+ M+++ + F Y+DR V K
Sbjct: 71 RKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIP 130
Query: 122 LPSLEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMRGICRSEVKT 181
+PSL++ T F V+ + +V++ LI +ER+G +D L+ ++ + + T
Sbjct: 131 IPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVENGMGT 190
Query: 182 ------KLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYL-CISE 234
+S ++QDT YYSRK+ W + DY+ KV+E ++ E +R+ HYL I+E
Sbjct: 191 LEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHSITE 250
Query: 235 EEGSGLCLKAVSAPLMQAYENYTKEKHIGGQVLLQ 269
L K + L+ +N + +H G LL+
Sbjct: 251 ---PKLVEKIQNELLVMVTKNRLENEHSGFSALLR 282
>AT1G02980.1 | chr1:677869-681212 FORWARD LENGTH=743
Length = 742
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 22/300 (7%)
Query: 7 FEDGWKILEQGIVKCSKLLEDCPGGRP-TVNEYMNYYDCAYRMAVQK--DQYCQEMYNSY 63
E GW ++E G+ K K+LE+ P P + M Y + + QK + Y Q++Y+ Y
Sbjct: 8 LEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRY 67
Query: 64 KATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKKLP 123
+ VLP + K G+ RELVK W+N ++R+ + F YLDR + P
Sbjct: 68 GGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHP 127
Query: 124 SLEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMRGICRSEVKTKL 183
+L SF V+ ++ D +L LI +ER+G +D LL ++ C + + +
Sbjct: 128 TLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELV 187
Query: 184 K------SAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYLCISEEEG 237
K S +++D+ YYSR + W + DY+ K +E+++ E +R+ +YL + E
Sbjct: 188 KYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTE-- 245
Query: 238 SGLCLKAVSAPLMQAYENYTKEKHIGGQVLLQTYKTVEDDLLDRCSRL-----TIDNGLD 292
L K + L+ + + +H G + LL+ DD +D +R+ I GLD
Sbjct: 246 PKLVAKVQNELLVVVAKQLIENEHSGCRALLR------DDKMDDLARMYRLYHPIPQGLD 299
>AT1G59800.1 | chr1:22004964-22006172 FORWARD LENGTH=256
Length = 255
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 12/234 (5%)
Query: 5 LRFEDGWKILEQGIVKCSKLLEDCPGGRPTVNE--YMNYYDCAYRMAVQKDQYCQEMYNS 62
++FE W ++QG K +++E P N+ M + YR+ K+ Q++Y+
Sbjct: 7 IKFEVEWSNIQQGFTKLIRMIEG--ESEPAFNQEIMMMMHTATYRICAYKNP--QQLYDK 62
Query: 63 YKATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKKL 122
Y+ E+ VLP L K + REL K W+ + ++R + L YLD F++ K L
Sbjct: 63 YRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGL 122
Query: 123 PSLEDAAATSFFSPVFSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMRGICRSEVKT- 181
PSL + F V+ + ++ +L LI +ER+G +D +L+ ++ + + T
Sbjct: 123 PSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENGMGTL 182
Query: 182 -----KLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYL 230
+ ++QDT YYS K+ WI + DY K Q+ +Q+E +R+ HYL
Sbjct: 183 KKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYL 236
>AT1G26830.1 | chr1:9296063-9298374 FORWARD LENGTH=733
Length = 732
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 11 WKILEQGIVKCSKLLEDCPGGRPTVNEYMNYYDCAYRMAVQKDQYCQEMYNSYKATHESC 70
W+ILE+ I + +D G + Y AY M + K + +++Y + AT S
Sbjct: 29 WQILERAIHQIYN--QDASGL-----SFEELYRNAYNMVLHK--FGEKLYTGFIATMTS- 78
Query: 71 VCAMVLPHLMHK-------QGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKKLP 123
HL K QG F EL K W+ + + L Y+DR ++ K
Sbjct: 79 -------HLKEKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKT 131
Query: 124 SLEDAAATSFFSPV--FSYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMR---GICRSE 178
+ + V F+ + + + LL L+++ER G +D L+ +++ + S
Sbjct: 132 HVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESV 191
Query: 179 VKTKLKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYL-CISEEEG 237
+ + + + +Y +S E+I DYL K ++ + +E++R+ HYL SEE+
Sbjct: 192 YQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKI 251
Query: 238 SGLCLKAVSAPLMQ 251
+ + K + A MQ
Sbjct: 252 TSVVEKEMIANHMQ 265
>AT1G69670.1 | chr1:26202169-26204442 REVERSE LENGTH=733
Length = 732
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 11 WKILEQGIVKCSKLLEDCPGGRPTVNEYMNYYDCAYRMAVQKDQYCQEMYNSYKAT---H 67
WKILE I + + + Y AY M + K Y ++Y T H
Sbjct: 29 WKILEHAI-------HEIYNHNASGLSFEELYRNAYNMVLHK--YGDKLYTGLVTTMTFH 79
Query: 68 ESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAMIRFTTGFLAYLDRCFVTHKKLPSLED 127
+C + QG F L + W+++ ++ L Y+DR +V+ K + +
Sbjct: 80 LKEICKSI----EEAQGGAFLELLNRKWNDHNKALQMIRDILMYMDRTYVSTTKKTHVHE 135
Query: 128 AAATSFFSPVF--SYFNNEISDVLLTLIRQERDGCNVDMDLLMGIMR---GICRSEVKTK 182
+ V S + + LL L+ +ER G +D L+ +++ + S +
Sbjct: 136 LGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVIKMFMDLGESVYQDD 195
Query: 183 LKSAVIQDTYLYYSRKSYEWIVQYPLQDYLAKVQETVQKEMKRLIHYLCISEE 235
+ ++ + +Y +S E+I +YL K ++ + +E++R+++YL E
Sbjct: 196 FEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSE 248
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,889,934
Number of extensions: 286637
Number of successful extensions: 681
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 670
Number of HSP's successfully gapped: 7
Length of query: 300
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 202
Effective length of database: 8,419,801
Effective search space: 1700799802
Effective search space used: 1700799802
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 111 (47.4 bits)