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Os01g0369000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cullin-1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0105) R2 : 0.652
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.739 (0.0255) R2dC : 0.639 R2C : 0.639
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0813 (0.0221) R2dN8 : 0.0133 R2N8 : 0.0135
σ : 0.199
deviance : 18.01
__
_____
C
peak time of C : 1.87
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.01 0.163 11.9 0.303 0.48 -0.324 -0.0723 0.0976 0.114 2.91 15.17 10 -- --
12.03 0.162 11.9 0.306 0.485 -0.319 -0.14 -- 0.112 2.81 15.87 9 -- --
12.03 0.162 11.9 0.303 0.478 -0.327 -- 0.118 0.112 2.92 15.17 9 -- --
12.11 0.162 11.9 0.309 0.482 -0.324 -- -- 0.111 2.87 15.91 9 -- --
17.32 0.194 11.9 0.338 -- -0.54 -- 0.157 0.125 -- 8.45 192 -- --
15.8 0.186 11.9 0.283 0.734 -- -0.108 -- 0.113 1.85 -- -- -- --
15.85 0.186 11.9 0.286 0.734 -- -- -- 0.113 1.85 -- -- -- --
16.72 0.19 11.9 0.269 -- -0.604 -- -- 0.134 -- 7.92 196 -- --
14.69 0.179 11.9 -- 0.468 -0.331 -- -- 0.0995 2.92 15.18 9 -- --
48.45 0.325 11.9 0.316 -- -- -- -- 0.13 -- -- -- -- --
18.01 0.199 11.9 -- 0.739 -- -- -- 0.0813 1.87 -- -- -- --
18.64 0.201 11.9 -- -- -0.614 -- -- 0.0946 -- 8.34 192 -- --
51.09 0.334 11.9 -- -- -- -- -- 0.0949 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 9.56 temperature 10.0 270 > th dose dependent rect. 6 7
3 9.74 temperature 20.0 270 > th dose independent rect. 7 6
6 10.01 radiation 1.0 270 > th dose independent rect. 6 7
7 10.07 wind 7.0 270 < th dose independent rect. 7 6
8 10.09 temperature 15.0 270 > th dose independent rect. 13 18
19 10.19 humidity 50.0 270 > th dose independent rect. 7 6
30 10.25 wind 9.0 270 < th dose independent rect. 7 18
31 10.25 humidity 50.0 270 > th dose independent rect. 7 18
34 10.28 radiation 20.0 270 < th dose dependent rect. 2 5
35 10.29 radiation 10.0 270 < th dose independent rect. 2 5
37 10.31 wind 1.0 270 > th dose independent rect. 7 6
41 10.31 temperature 10.0 270 > th dose dependent rect. 13 18
42 10.32 atmosphere 1010.0 270 < th dose independent rect. 1 6
50 10.35 temperature 20.0 270 > th dose independent rect. 8 3
51 10.35 precipitation 0.1 270 < th dose independent rect. 6 7
52 10.35 radiation 1.0 270 < th dose independent rect. 17 9
53 10.35 radiation 40.0 270 < th dose independent rect. 13 17
55 10.35 precipitation 0.1 270 < th dose dependent rect. 6 7
57 10.37 wind 7.0 270 < th dose independent rect. 1 6
59 10.37 temperature 10.0 270 > th dose independent rect. 1 6
61 10.37 temperature 30.0 270 < th dose independent rect. 1 6
62 10.37 humidity 50.0 270 > th dose independent rect. 1 6
64 10.37 atmosphere 995.0 270 > th dose independent rect. 1 6
66 10.37 radiation 30.0 270 < th dose independent rect. 1 6
69 10.37 temperature 10.0 270 > th dose independent rect. 7 18
71 10.37 radiation 10.0 270 < th dose dependent rect. 17 9
80 10.39 atmosphere 995.0 270 > th dose independent rect. 6 7
81 10.39 atmosphere 1015.0 270 < th dose independent rect. 6 7
90 10.41 temperature 10.0 10 > th dose dependent rect. 8 7
101 10.43 precipitation 0.1 270 < th dose independent rect. 1 6
103 10.43 precipitation 0.1 270 < th dose dependent rect. 1 6
106 10.44 humidity 60.0 270 > th dose independent rect. 18 8
107 10.44 precipitation 0.1 270 < th dose independent rect. 13 17
110 10.44 precipitation 0.1 270 < th dose dependent rect. 13 17
113 10.46 humidity 90.0 90 < th dose independent rect. 7 8
129 10.47 humidity 50.0 270 > th dose dependent rect. 2 5
141 10.49 temperature 10.0 270 > th dose independent rect. 18 8
146 10.49 temperature 10.0 270 > th dose independent rect. 2 16
147 10.49 atmosphere 1015.0 270 < th dose independent rect. 2 16
153 10.50 wind 9.0 270 < th dose independent rect. 18 8
154 10.50 temperature 30.0 270 < th dose independent rect. 18 8
156 10.50 wind 9.0 270 < th dose independent rect. 14 16
159 10.51 precipitation 0.1 270 < th dose independent rect. 2 16
161 10.51 atmosphere 995.0 270 > th dose independent rect. 13 18
166 10.51 precipitation 0.1 270 < th dose dependent rect. 2 16
175 10.53 atmosphere 995.0 270 > th dose independent rect. 18 8
185 10.56 precipitation 0.1 270 < th dose independent rect. 7 18
187 10.56 precipitation 0.1 270 < th dose dependent rect. 7 18
198 10.61 precipitation 0.1 270 < th dose independent rect. 18 8
199 10.61 atmosphere 995.0 270 > th dose independent rect. 2 16
202 10.61 precipitation 0.1 270 < th dose dependent rect. 18 8
205 10.63 temperature 10.0 270 > th dose dependent rect. 1 6
223 10.65 temperature 20.0 10 > th dose independent rect. 8 7
240 10.68 temperature 10.0 270 > th dose dependent rect. 2 4
261 10.69 wind 9.0 270 < th dose dependent rect. 2 5
269 10.70 radiation 1.0 270 < th dose independent rect. 2 9
291 10.73 humidity 60.0 270 > th dose independent rect. 7 4
293 10.73 atmosphere 1010.0 270 < th dose independent rect. 13 18
300 10.74 wind 9.0 270 < th dose independent rect. 2 16
303 10.75 radiation 10.0 270 < th dose dependent rect. 2 13
318 10.77 wind 1.0 270 > th dose independent rect. 7 18
326 10.78 temperature 10.0 10 > th dose dependent rect. 15 17
339 10.79 wind 9.0 270 < th dose dependent rect. 7 6
345 10.80 temperature 15.0 10 > th dose independent rect. 15 17
393 10.83 radiation 10.0 270 < th dose dependent rect. 2 9
417 10.85 humidity 60.0 270 > th dose independent rect. 20 15
464 10.88 radiation 40.0 90 < th dose dependent rect. 15 17
482 10.89 radiation 40.0 90 < th dose dependent rect. 13 19
496 10.91 humidity 50.0 270 > th dose dependent rect. 18 8
554 10.97 atmosphere 1015.0 270 < th dose independent rect. 7 18
574 10.99 humidity 90.0 10 < th dose independent rect. 8 7
587 11.00 atmosphere 995.0 270 > th dose independent rect. 7 18
590 11.00 radiation 40.0 10 < th dose dependent rect. 14 18
635 11.04 precipitation 0.1 270 < th dose independent rect. 11 9
640 11.04 precipitation 0.1 270 < th dose dependent rect. 11 9
642 11.04 radiation 40.0 90 < th dose dependent rect. 4 15
670 11.07 humidity 50.0 10 > th dose independent rect. 8 7
672 11.07 precipitation 0.1 270 < th dose independent rect. 20 15
675 11.07 precipitation 0.1 270 < th dose dependent rect. 20 15
678 11.08 wind 9.0 10 < th dose independent rect. 8 7
683 11.08 humidity 50.0 270 > th dose independent rect. 19 18
710 11.10 wind 1.0 270 > th dose independent rect. 1 6
748 11.12 atmosphere 995.0 270 > th dose dependent rect. 2 4
766 11.13 wind 1.0 10 > th dose independent rect. 8 7
769 11.13 wind 7.0 270 < th dose independent rect. 20 16
783 11.14 radiation 30.0 10 < th dose independent rect. 14 18
802 11.16 radiation 1.0 270 < th dose independent sin 3 NA
808 11.16 temperature 10.0 270 > th dose independent rect. 11 9
810 11.16 atmosphere 1015.0 270 < th dose independent rect. 11 9
814 11.16 temperature 10.0 270 > th dose independent rect. 20 15
815 11.16 atmosphere 995.0 270 > th dose independent rect. 20 15
816 11.16 atmosphere 995.0 10 > th dose independent rect. 15 17
823 11.16 atmosphere 995.0 270 > th dose dependent rect. 1 6
858 11.19 temperature 10.0 10 > th dose independent rect. 8 7
860 11.19 atmosphere 995.0 10 > th dose independent rect. 8 7
861 11.19 atmosphere 1015.0 10 < th dose independent rect. 8 7
862 11.19 precipitation 0.1 10 < th dose independent rect. 8 7
871 11.19 precipitation 0.1 10 < th dose dependent rect. 8 7
889 11.20 wind 7.0 270 < th dose independent rect. 19 18
894 11.20 radiation 30.0 10 < th dose independent rect. 12 20
904 11.21 radiation 1.0 270 > th dose independent sin 3 NA
905 11.21 precipitation 0.1 270 < th dose independent rect. 13 6
925 11.21 precipitation 0.1 270 < th dose dependent rect. 13 6
949 11.23 radiation 1.0 90 < th dose dependent sin 13 NA
963 11.24 wind 1.0 270 > th dose independent rect. 13 17
965 11.24 wind 9.0 10 < th dose independent rect. 15 17
992 11.25 radiation 10.0 270 < th dose dependent sin 5 NA
997 11.25 radiation 30.0 10 < th dose dependent rect. 5 15