FiT-DB / Search/ Help/ Sample detail

Os01g0369200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cullin-1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.65 (0.0396) R2 : 0.796
β1 : 6.25 (0.195) R2dD : 0.92 R2D : 0.626
β2 : 1.15 (0.0976) R2dC : 0.0525 R2C : 0.016
β3 : 0.822 (0.181) R2dE : 0.0248 R2E : -0.169
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.08 (0.0905) R2dN8 : 0.11 R2N8 : -0.0331
σ : 0.725
deviance : 242.58
__
_____
C
peak time of C : 15.5
E
wheather : temperature
threshold : 14.71
memory length : 17707
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
228.01 0.709 6.49 6.74 1.05 -0.376 1.65 -4.93 1.25 15.2 23.43 3898 -- --
242.95 0.726 6.66 6.06 1.03 1.27 1.43 -- 0.993 15.3 16.9 3546 -- --
234.36 0.713 6.5 6.71 1.05 -0.261 -- -4.78 1.25 15.4 22.91 3274 -- --
242.58 0.725 6.65 6.25 1.15 0.822 -- -- 1.08 15.5 14.71 17707 -- --
296.44 0.802 6.5 6.68 -- -0.194 -- -4.77 1.23 -- 22.7 3256 -- --
258.61 0.754 6.68 5.7 1.05 -- 1.32 -- 0.964 15.3 -- -- -- --
264.09 0.761 6.67 5.73 1.06 -- -- -- 0.972 15.4 -- -- -- --
300.26 0.807 6.61 6.59 -- 1.38 -- -- 1.21 -- 14.7 22932 -- --
478.21 1.02 7.09 -- 1.11 -4.11 -- -- -0.891 15.3 59.25 47520 -- --
327.46 0.846 6.67 5.68 -- -- -- -- 0.944 -- -- -- -- --
1128.35 1.57 6.82 -- 0.95 -- -- -- 0.335 15.5 -- -- -- --
548.42 1.09 7.09 -- -- -4.04 -- -- -0.895 -- 68.24 47520 -- --
1178.94 1.6 6.82 -- -- -- -- -- 0.314 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 212.50 humidity 60 43200 < th dose independent rect. 9 3
4 213.17 radiation 10 43200 > th dose independent rect. 17 1
18 213.86 radiation 10 43200 < th dose independent rect. 24 5
21 214.31 radiation 10 43200 < th dose independent rect. 21 8
25 214.54 wind 9 43200 > th dose dependent rect. 15 1
28 214.73 radiation 10 43200 < th dose independent rect. 19 10
36 215.21 humidity 60 43200 > th dose independent rect. 9 2
37 215.24 humidity 60 43200 > th dose independent rect. 8 4
40 215.44 radiation 1 43200 > th dose independent rect. 4 1
50 215.44 radiation 1 43200 > th dose dependent rect. 4 1
62 215.49 wind 1 43200 < th dose dependent rect. 2 1
68 216.07 wind 1 43200 < th dose independent rect. 2 1
69 216.18 radiation 30 1440 < th dose dependent rect. 8 1
90 217.56 radiation 40 43200 < th dose independent rect. 16 12
96 217.74 radiation 1 1440 > th dose dependent rect. 8 1
101 217.85 radiation 40 43200 < th dose independent rect. 15 17
104 218.00 radiation 20 43200 < th dose independent rect. 17 3
105 218.04 radiation 20 1440 < th dose independent rect. 8 1
110 218.13 radiation 20 43200 < th dose independent rect. 17 1
111 218.13 radiation 40 43200 < th dose independent rect. 15 5
116 218.19 radiation 40 43200 < th dose independent rect. 15 3
122 218.25 radiation 40 43200 < th dose independent rect. 15 7
134 218.42 radiation 20 43200 < th dose independent rect. 17 5
136 218.46 radiation 40 43200 < th dose dependent rect. 24 5
141 218.52 radiation 40 43200 < th dose independent rect. 24 8
149 218.73 radiation 40 43200 < th dose independent rect. 21 11
150 218.74 radiation 40 43200 < th dose independent rect. 7 1
154 218.77 radiation 30 43200 > th dose dependent rect. 16 1
175 218.92 radiation 1 43200 > th dose independent rect. 10 2
176 218.92 radiation 40 43200 < th dose independent rect. 19 13
177 218.94 radiation 40 43200 < th dose independent rect. 17 15
190 219.20 radiation 1 43200 < th dose independent rect. 10 2
191 219.20 radiation 1 43200 < th dose dependent rect. 10 2
193 219.25 wind 1 43200 > th dose independent rect. 2 1
194 219.26 humidity 60 43200 < th dose independent rect. 18 18
200 219.41 radiation 40 43200 > th dose dependent rect. 15 17
201 219.50 radiation 40 43200 < th dose dependent rect. 21 8
203 219.71 radiation 1 43200 < th dose dependent rect. 7 7
222 220.02 radiation 1 43200 > th dose independent rect. 8 5
230 220.13 radiation 1 43200 < th dose independent rect. 8 5
237 220.24 radiation 1 43200 < th dose dependent rect. 7 2
244 220.28 radiation 40 43200 < th dose dependent rect. 19 10
256 220.35 radiation 1 1440 > th dose dependent rect. 18 15
263 220.43 humidity 90 14400 > th dose independent rect. 24 2
278 220.51 temperature 20 14400 < th dose independent rect. 6 4
292 220.63 temperature 20 14400 < th dose dependent rect. 3 1
297 220.69 radiation 10 1440 > th dose independent rect. 8 1
300 220.73 temperature 20 14400 > th dose independent rect. 6 5
309 220.80 radiation 1 43200 < th dose independent rect. 8 1
310 220.81 wind 9 43200 > th dose independent rect. 12 1
311 220.81 radiation 20 1440 < th dose independent rect. 3 7
312 220.81 temperature 20 14400 < th dose independent rect. 6 8
315 220.82 temperature 20 14400 < th dose independent rect. 6 11
319 220.83 radiation 1 14400 < th dose dependent rect. 19 10
328 220.87 temperature 20 14400 > th dose independent rect. 6 8
329 220.87 temperature 20 14400 > th dose independent rect. 6 12
334 220.89 radiation 20 1440 < th dose independent rect. 17 17
336 220.90 radiation 1 43200 > th dose independent rect. 8 1
347 220.93 radiation 1 14400 < th dose dependent rect. 24 5
372 220.98 radiation 20 1440 < th dose independent rect. 22 12
373 220.98 radiation 20 1440 < th dose independent rect. 20 14
399 221.08 temperature 20 43200 < th dose dependent rect. 24 1
413 221.15 radiation 40 1440 < th dose dependent rect. 3 6
443 221.28 radiation 1 14400 < th dose dependent rect. 4 1
460 221.36 humidity 70 43200 < th dose independent rect. 7 1
463 221.36 temperature 20 14400 < th dose dependent rect. 24 8
467 221.37 temperature 20 14400 < th dose dependent rect. 2 6
473 221.39 temperature 20 14400 < th dose dependent rect. 6 2
493 221.47 humidity 90 14400 < th dose independent rect. 22 4
500 221.48 wind 9 43200 > th dose dependent rect. 12 1
638 221.79 temperature 20 14400 < th dose dependent sin 8 NA
730 221.98 radiation 20 1440 < th dose independent sin 9 NA
753 222.02 radiation 30 43200 > th dose dependent rect. 7 1
897 222.22 wind 9 4320 > th dose dependent rect. 15 1
951 222.29 wind 9 43200 > th dose dependent rect. 11 3
974 222.33 temperature 20 14400 < th dose independent sin 1 NA
984 222.34 temperature 20 14400 > th dose independent rect. 17 1
985 222.34 radiation 40 43200 > th dose independent rect. 15 17