BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0123100 Os05g0123100|AK120892
(371 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0123100 Glycosyl transferase, family 43 protein 561 e-160
Os03g0287800 Glycosyl transferase, family 43 protein 222 3e-58
Os07g0694400 Glycosyl transferase, family 43 protein 152 3e-37
Os01g0157700 151 8e-37
Os05g0559600 Glycosyl transferase, family 43 protein 148 5e-36
Os01g0675500 Similar to Glycoprotein-specific UDP-glucurony... 142 4e-34
Os10g0205300 Glycosyl transferase, family 43 protein 130 1e-30
Os04g0103100 Glycosyl transferase, family 43 protein 130 2e-30
Os03g0793100 Glycosyl transferase, family 43 protein 72 5e-13
Os07g0588900 Glycosyl transferase, family 43 protein 69 5e-12
>Os05g0123100 Glycosyl transferase, family 43 protein
Length = 371
Score = 561 bits (1445), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/371 (76%), Positives = 285/371 (76%)
Query: 1 MGTAAVAAAERPKQRRSSHLWKKALLHFSLCFVMGFFTGFAPXXXXXXXXXXXXXXXVQP 60
MGTAAVAAAERPKQRRSSHLWKKALLHFSLCFVMGFFTGFAP VQP
Sbjct: 1 MGTAAVAAAERPKQRRSSHLWKKALLHFSLCFVMGFFTGFAPSSSSSWRAGSGGGGGVQP 60
Query: 61 RHQLAASHVAVNQQVSLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMLIVVXXXXXXX 120
RHQLAASHVAVNQQVSLVP RRMLIVV
Sbjct: 61 RHQLAASHVAVNQQVSLVPDAAAAEAAGVGNGAVVDVGDDEGGEGARRMLIVVTTTRGER 120
Query: 121 XXXXXXXXXXAHTXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGVMYRHLAFRPEENFTTA 180
AHT GTGVMYRHLAFRPEENFTTA
Sbjct: 121 RRRRGELLRLAHTLRLVRPPVVWVVVEPAADAAATAEVLRGTGVMYRHLAFRPEENFTTA 180
Query: 181 DAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEK 240
DAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEK
Sbjct: 181 DAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEK 240
Query: 241 KVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNS 300
KVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNS
Sbjct: 241 KVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNS 300
Query: 301 SILWDPERWGRPTSLPDTSQDSIKFVQEVVLEDRTKLKGIPSDCSQIMVWQYTMPMQVHA 360
SILWDPERWGRPTSLPDTSQDSIKFVQEVVLEDRTKLKGIPSDCSQIMVWQYTMPMQVHA
Sbjct: 301 SILWDPERWGRPTSLPDTSQDSIKFVQEVVLEDRTKLKGIPSDCSQIMVWQYTMPMQVHA 360
Query: 361 QTSTPKTHNRR 371
QTSTPKTHNRR
Sbjct: 361 QTSTPKTHNRR 371
>Os03g0287800 Glycosyl transferase, family 43 protein
Length = 339
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 134/192 (69%), Gaps = 12/192 (6%)
Query: 162 TGVMYRHLAFRPEENFTTADA----EAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHF 217
TG+MYRHL ++ +NFT ADA E H QRN AL H+E HRL+GVV FA +D F
Sbjct: 153 TGLMYRHLTYK--DNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRF 210
Query: 218 FDEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEAD 277
FD++RQI FG WPVATMS E+KVVV+GP CS S V GWFS D ++ T+
Sbjct: 211 FDQLRQIRTFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYG 270
Query: 278 LNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGR-PTSLPDTSQDSIKFVQEVVLEDRTK 336
AA R +DV GFAFNSS+LWDPERWGR PTS PD SQDS+KFVQ+VVLED +K
Sbjct: 271 -----AAAARPRELDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSVKFVQQVVLEDYSK 325
Query: 337 LKGIPSDCSQIM 348
++GIPSDCS++M
Sbjct: 326 VRGIPSDCSEVM 337
>Os07g0694400 Glycosyl transferase, family 43 protein
Length = 338
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 120/201 (59%), Gaps = 19/201 (9%)
Query: 162 TGVMYRHLAFRP-EENFTTA-DAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFD 219
TGV++RHL + +++F+ QRN AL H+E HR++GVV F A +YD
Sbjct: 141 TGVVHRHLLMKQGDDDFSMQISMRREQQRNVALRHIEDHRIAGVVLFGGLADIYDLRLLH 200
Query: 220 EIRQIEAFGTWPVATMSAGEKKVVVEGPLC---SDSKVV--GWFSRDFNDGTTRAVTYNT 274
+R I FG WPVAT+SA E+KV+V+GPLC S S V+ GWF D +
Sbjct: 201 HLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMD--MAAGGERRA 258
Query: 275 EADLNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGR-PTSLPDTSQDSIKFVQEVVLED 333
AD P ++V GFAF+S +LWDP RW R P S PD SQ+S+KFVQ V +E+
Sbjct: 259 AADRPPPET------LMEVGGFAFSSWMLWDPHRWDRFPLSDPDASQESVKFVQRVAVEE 312
Query: 334 --RTKLKGIP-SDCSQIMVWQ 351
++ +G+P SDCSQIM+W+
Sbjct: 313 YNQSTTRGMPDSDCSQIMLWR 333
>Os01g0157700
Length = 549
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 122/221 (55%), Gaps = 27/221 (12%)
Query: 161 GTGVMYRHLAFRPEENFT-TADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFD 219
GT VM+RHL + E NFT A E Q N AL+H++ HRL GVVHFA A+ VYD FF
Sbjct: 125 GTRVMFRHLTYAAE-NFTGPAGDEVDYQMNVALSHIQLHRLPGVVHFAAASSVYDLRFFQ 183
Query: 220 EIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAV---TYNTEA 276
++RQ WP+AT+S+ ++ V +EGP C+ S++ GW+S+D + T + NT
Sbjct: 184 QLRQTRGIAAWPIATVSSADQTVKLEGPTCNSSQITGWYSKDSSSNITETTWDSSSNTTQ 243
Query: 277 DLNPAGAAGTRAHT-------------------IDVSGFAFNSSILWDPERWG-RPTSLP 316
+ + T+ T I++ F SS+LWD ER+ R S
Sbjct: 244 TTWDSSSNKTQTTTLAALDTNASKQNSSSGPPEINMHAVGFKSSMLWDSERFTRRDNSST 303
Query: 317 DTSQDSIKFVQEVVLEDRTKLKGIPSDC--SQIMVWQYTMP 355
+QD I+ V+++++ D K +GIPSDC SQIM+W MP
Sbjct: 304 GINQDLIQAVRQMMINDEDKKRGIPSDCSDSQIMLWHLDMP 344
>Os05g0559600 Glycosyl transferase, family 43 protein
Length = 451
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 39/206 (18%)
Query: 162 TGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEI 221
+GVMYRHL R +N T+ A QRN A+ H++KHRL G++HFAD Y + F+E+
Sbjct: 248 SGVMYRHLICR--KNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEM 305
Query: 222 RQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPA 281
R+I FG WPVA + + +VV+EGP+C ++V GW NT ++
Sbjct: 306 RKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGW---------------NTIQNIQKK 350
Query: 282 GAAGTRAHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSI-------------KFVQE 328
A R + SGFAFNS++LWDPERW RP DS+ +F+++
Sbjct: 351 SA--VRRFPVGFSGFAFNSTMLWDPERWNRP------PMDSVIVHSGGRGGLQESRFIEK 402
Query: 329 VVLEDRTKLKGIPSDCSQIMVWQYTM 354
+V +R +++G+P DC+++MVW + +
Sbjct: 403 LVKHER-QIEGLPEDCNRVMVWNFNL 427
>Os01g0675500 Similar to Glycoprotein-specific UDP-glucuronyltransferase-like
protein
Length = 446
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 31/206 (15%)
Query: 162 TGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEI 221
+G+MYRHL N T Q+N A+ H++KHRL G+VHFAD Y A F+E+
Sbjct: 246 SGIMYRHLIC--NRNTTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEM 303
Query: 222 RQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPA 281
R+I FGTWPVA + +VV+EGP+C ++V GW + R V
Sbjct: 304 RKIRRFGTWPVAIHVGTKYRVVLEGPVCKGNQVTGWHT-----NQRRGV----------- 347
Query: 282 GAAGTRAHTIDVSGFAFNSSILWDPERWGRPT-------SLPDTSQDSIKFVQEVVLEDR 334
+R I SGFAFNS+ILWDP+RW PT S +F++++V ED
Sbjct: 348 ----SRRFPIGFSGFAFNSTILWDPQRWNSPTLESIIVHSGGRGGLQESRFIEKLV-EDE 402
Query: 335 TKLKGIPSDCSQIMVWQYTM-PMQVH 359
++++G+ +C+++MVW + + P QV+
Sbjct: 403 SQMEGLGDNCTRVMVWNFELEPPQVN 428
>Os10g0205300 Glycosyl transferase, family 43 protein
Length = 351
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 111/209 (53%), Gaps = 44/209 (21%)
Query: 161 GTGVMYRHLA-------------FRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFA 207
G GVMYRHL+ ++ D+ A QRN AL H+E HRL G+V+FA
Sbjct: 129 GCGVMYRHLSSPVPDAPQDRPRRRGRRQDRPAVDSRAR-QRNTALDHIEHHRLHGIVYFA 187
Query: 208 DAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTT 267
D VY F +R I +FGTWPVAT++ G+ K +++GP+C S+VVGW + D
Sbjct: 188 DEDNVYSLDLFYHLRDIRSFGTWPVATLAPGKSKTILQGPVCEGSRVVGWHTTD------ 241
Query: 268 RAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNSSILWDPER-----WGRPTSLPDTSQDS 322
+ R +D+SGFAFNSS LWD + W L DT+++
Sbjct: 242 --------------RSKNQRRFHVDMSGFAFNSSKLWDAKNRGHQAWNYIRQL-DTAKEG 286
Query: 323 IK---FVQEVVLEDRTKLKGIPSDCSQIM 348
+ F++++V ED T ++G+P CS+IM
Sbjct: 287 FQETAFIEQLV-EDETHMEGVPPGCSKIM 314
>Os04g0103100 Glycosyl transferase, family 43 protein
Length = 381
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 110/198 (55%), Gaps = 31/198 (15%)
Query: 162 TGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEI 221
T V++R++ N + D H Q NAAL V+ HRL GV++FAD GVY H F +
Sbjct: 180 TAVLHRYVGCCHNINASAPDFRPH-QINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHL 238
Query: 222 RQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPA 281
RQI F TWPV +S +VV++GP+C +VVGW + +DG
Sbjct: 239 RQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTT--HDGNK-------------- 282
Query: 282 GAAGTRAHTIDVSGFAFNSSILWDPER-----WGRPTSLPDTSQDSIK---FVQEVVLED 333
R + +SGFAFNS++LWDP+ W P+ ++S++ FV+++V ED
Sbjct: 283 ----LRRFHLAMSGFAFNSTMLWDPKLRSHLAWNS-IRHPEMVKESLQGSAFVEQLV-ED 336
Query: 334 RTKLKGIPSDCSQIMVWQ 351
++++GIP+DCSQIM W
Sbjct: 337 ESQMEGIPADCSQIMNWH 354
>Os03g0793100 Glycosyl transferase, family 43 protein
Length = 268
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 189 NAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPV 232
NAALAHVEKH SGVVHFADAAGVYDAHFFD+IRQ + WP+
Sbjct: 108 NAALAHVEKHYFSGVVHFADAAGVYDAHFFDKIRQTD----WPL 147
>Os07g0588900 Glycosyl transferase, family 43 protein
Length = 163
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 189 NAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEA 226
NAALAHVEKH GVVHFADAAGVYDAHFFD+IRQ E+
Sbjct: 107 NAALAHVEKHYFPGVVHFADAAGVYDAHFFDKIRQTES 144
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.131 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,689,761
Number of extensions: 343777
Number of successful extensions: 795
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 776
Number of HSP's successfully gapped: 10
Length of query: 371
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 269
Effective length of database: 11,709,973
Effective search space: 3149982737
Effective search space used: 3149982737
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)