Os04g0103100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 43 protein.
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Os04g0103100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 43 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 310.57 | 0.828 | 3.6 | 0.415 | 0.12 | 0.292 | 0.814 | -2.09 | 0.461 | 18.6 | 9.534 | 4505 | -- | -- |
| 312.5 | 0.823 | 3.64 | 0.578 | 0.149 | 0.593 | 0.858 | -- | 0.474 | 18.8 | 8.7 | 4511 | -- | -- |
| 312.02 | 0.823 | 3.6 | 0.409 | 0.111 | 0.28 | -- | -2.18 | 0.446 | 19.2 | 9.681 | 4502 | -- | -- |
| 313.86 | 0.825 | 3.64 | 0.602 | 0.12 | 0.678 | -- | -- | 0.433 | 19.7 | 8.771 | 4506 | -- | -- |
| 312.91 | 0.824 | 3.6 | 0.386 | -- | 0.283 | -- | -2.06 | 0.446 | -- | 9.7 | 4513 | -- | -- |
| 322.98 | 0.843 | 3.64 | 0.396 | 0.0979 | -- | 0.883 | -- | 0.488 | 18.5 | -- | -- | -- | -- |
| 324.93 | 0.844 | 3.63 | 0.384 | 0.102 | -- | -- | -- | 0.49 | 18.2 | -- | -- | -- | -- |
| 314.67 | 0.826 | 3.65 | 0.573 | -- | 0.645 | -- | -- | 0.426 | -- | 8.631 | 4615 | -- | -- |
| 321.81 | 0.836 | 3.64 | -- | 0.138 | 0.471 | -- | -- | 0.41 | 19.9 | 9.116 | 4502 | -- | -- |
| 325.47 | 0.843 | 3.63 | 0.381 | -- | -- | -- | -- | 0.488 | -- | -- | -- | -- | -- |
| 328.81 | 0.848 | 3.64 | -- | 0.0968 | -- | -- | -- | 0.448 | 18.4 | -- | -- | -- | -- |
| 322.47 | 0.836 | 3.66 | -- | -- | 0.473 | -- | -- | 0.373 | -- | 9.1 | 4577 | -- | -- |
| 329.3 | 0.847 | 3.64 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 304.58 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 2 | 304.83 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 3 | 305.12 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 5 | 305.20 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 6 | 305.27 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 7 | 305.32 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 8 | 305.33 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 11 | 305.41 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 7 |
| 12 | 305.46 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 31 | 305.89 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 37 | 306.01 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 42 | 306.11 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 45 | 306.14 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 50 | 306.16 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 67 | 306.28 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 101 | 306.56 | wind | 5 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 103 | 306.58 | wind | 9 | 4320 | < th | dose independent | sin | 11 | NA |
| 109 | 306.62 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 20 | 7 |
| 113 | 306.69 | wind | 7 | 4320 | > th | dose independent | sin | 11 | NA |
| 129 | 306.78 | wind | 7 | 4320 | > th | dose dependent | sin | 11 | NA |
| 229 | 307.44 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 11 | 16 |
| 251 | 307.62 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 15 | 12 |
| 294 | 307.75 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 12 | 15 |
| 323 | 307.86 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 17 | 10 |
| 376 | 308.19 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 13 | 14 |
| 417 | 308.44 | wind | 5 | 90 | > th | dose independent | rect. | 21 | 3 |
| 501 | 308.82 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 522 | 308.90 | humidity | 90 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 531 | 308.97 | humidity | 90 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 570 | 309.11 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 571 | 309.11 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 17 | 10 |
| 579 | 309.13 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 598 | 309.18 | atmosphere | 1005 | 10 | < th | dose independent | sin | 14 | NA |
| 703 | 309.57 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 753 | 309.78 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 767 | 309.86 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 24 | 2 |
| 789 | 309.94 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 18 | 10 |
| 839 | 310.13 | humidity | 90 | 90 | > th | dose independent | rect. | 1 | 1 |
| 844 | 310.15 | wind | 5 | 90 | > th | dose independent | rect. | 21 | 8 |
| 855 | 310.20 | wind | 5 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 859 | 310.21 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 869 | 310.24 | wind | 5 | 90 | > th | dose independent | rect. | 21 | 10 |
| 881 | 310.27 | wind | 5 | 90 | > th | dose independent | rect. | 22 | 1 |
| 926 | 310.42 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 927 | 310.43 | atmosphere | 1005 | 10 | > th | dose independent | sin | 14 | NA |
| 945 | 310.47 | wind | 9 | 30 | < th | dose independent | rect. | 3 | 23 |
| 963 | 310.53 | wind | 3 | 90 | > th | dose dependent | rect. | 21 | 3 |
| 976 | 310.58 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 2 | 1 |