BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0103100 Os04g0103100|AK070873
(381 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0103100 Glycosyl transferase, family 43 protein 607 e-174
Os10g0205300 Glycosyl transferase, family 43 protein 281 4e-76
Os01g0675500 Similar to Glycoprotein-specific UDP-glucurony... 211 8e-55
Os05g0559600 Glycosyl transferase, family 43 protein 204 1e-52
Os03g0287800 Glycosyl transferase, family 43 protein 157 1e-38
Os05g0123100 Glycosyl transferase, family 43 protein 132 4e-31
Os01g0157700 131 1e-30
Os07g0694400 Glycosyl transferase, family 43 protein 119 4e-27
>Os04g0103100 Glycosyl transferase, family 43 protein
Length = 381
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 309/381 (81%), Positives = 309/381 (81%)
Query: 1 MASIRRPHSPAKQQHLLRHGHLGPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH 60
MASIRRPHSPAKQQHLLRHGHLGPF GH
Sbjct: 1 MASIRRPHSPAKQQHLLRHGHLGPFASSSPPSSPLRHSSSSSSPRSAAHHHHHLLAAAGH 60
Query: 61 TSXXXXXXXXXXXXXXXXXXXXXXXXXXXPRPLGPIPNPNSHHRHRDPFPILQXXXXXXX 120
TS PRPLGPIPNPNSHHRHRDPFPILQ
Sbjct: 61 TSFRRPLPRFAAFFLLGSFLGLLHFLSHLPRPLGPIPNPNSHHRHRDPFPILQHPHPPST 120
Query: 121 XXXXXKLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRT 180
KLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRT
Sbjct: 121 PHSNHKLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRT 180
Query: 181 AVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQ 240
AVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQ
Sbjct: 181 AVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQ 240
Query: 241 IRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTML 300
IRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTML
Sbjct: 241 IRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTML 300
Query: 301 WDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSE 360
WDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSE
Sbjct: 301 WDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSE 360
Query: 361 SVVYPKGWRVATDLDVIIPLK 381
SVVYPKGWRVATDLDVIIPLK
Sbjct: 361 SVVYPKGWRVATDLDVIIPLK 381
>Os10g0205300 Glycosyl transferase, family 43 protein
Length = 351
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 181/269 (67%), Gaps = 14/269 (5%)
Query: 126 KLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRTAVLHR 185
KLL+VVTPTRARP QAYYL R+AHTLRL SPLLW+VV++G T + AA LR V++R
Sbjct: 77 KLLLVVTPTRARPLQAYYLRRLAHTLRL-APSPLLWLVVESGAATRDTAALLRGCGVMYR 135
Query: 186 YVGC-------------CHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSL 232
++ + A D R Q N ALD +++HRL G++YFADE+ VYSL
Sbjct: 136 HLSSPVPDAPQDRPRRRGRRQDRPAVDSRARQRNTALDHIEHHRLHGIVYFADEDNVYSL 195
Query: 233 HLFHHLRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSG 292
LF+HLR IR F TWPV ++ ++ +LQGPVC+ +VVGWHTT RRFH+ MSG
Sbjct: 196 DLFYHLRDIRSFGTWPVATLAPGKSKTILQGPVCEGSRVVGWHTTDRSKNQRRFHVDMSG 255
Query: 293 FAFNSTMLWDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMN 352
FAFNS+ LWD K R H AWN IR + KE Q +AF+EQLVEDE+ MEG+P CS+IMN
Sbjct: 256 FAFNSSKLWDAKNRGHQAWNYIRQLDTAKEGFQETAFIEQLVEDETHMEGVPPGCSKIMN 315
Query: 353 WHVPFGSESVVYPKGWRVATDLDVIIPLK 381
+H+ ++ +Y GW+ +LDVIIPLK
Sbjct: 316 FHLHLEDKNAIYLNGWQTTQNLDVIIPLK 344
>Os01g0675500 Similar to Glycoprotein-specific UDP-glucuronyltransferase-like
protein
Length = 446
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 152/255 (59%), Gaps = 2/255 (0%)
Query: 126 KLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRTAVLHR 185
K LI++T T RP QAYYL R+AH L+ + PLLWIV + + E A LR + +++R
Sbjct: 193 KHLIIITTTSVRPHQAYYLNRLAHVLKDV-PPPLLWIVAEWPYQSRETAEILRSSGIMYR 251
Query: 186 YVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFA 245
++ C N + Q N A+ + HRLDG+++FADEE YS LF +R+IRRF
Sbjct: 252 HLICNRN-TTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEMRKIRRFG 310
Query: 246 TWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTMLWDPKL 305
TWPV VVL+GPVCK QV GWHT RRF + SGFAFNST+LWDP+
Sbjct: 311 TWPVAIHVGTKYRVVLEGPVCKGNQVTGWHTNQRRGVSRRFPIGFSGFAFNSTILWDPQR 370
Query: 306 RSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSESVVYP 365
+ SI + LQ S F+E+LVEDESQMEG+ +C+++M W+ V YP
Sbjct: 371 WNSPTLESIIVHSGGRGGLQESRFIEKLVEDESQMEGLGDNCTRVMVWNFELEPPQVNYP 430
Query: 366 KGWRVATDLDVIIPL 380
GW + +LD ++P+
Sbjct: 431 IGWLLQRNLDAVVPI 445
>Os05g0559600 Glycosyl transferase, family 43 protein
Length = 451
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/258 (41%), Positives = 157/258 (60%), Gaps = 5/258 (1%)
Query: 126 KLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRTAVLHR 185
KLLI+VT T RP QAYYL R+AH L+ + SPLLW+VV+ + + + A LR + V++R
Sbjct: 195 KLLIIVTITTVRPQQAYYLNRLAHVLKTVQ-SPLLWLVVEWPDQSFQTAEILRSSGVMYR 253
Query: 186 YVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFA 245
++ C N S Q N A+ + HRLDG+++FADEE Y +F +R+IRRF
Sbjct: 254 HLICRKN-TTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEMRKIRRFG 312
Query: 246 TWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNK---LRRFHLAMSGFAFNSTMLWD 302
WPV + VVL+GP+CK +V GW+T + K +RRF + SGFAFNSTMLWD
Sbjct: 313 AWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGFSGFAFNSTMLWD 372
Query: 303 PKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSESV 362
P+ + +S+ + LQ S F+E+LV+ E Q+EG+P DC+++M W+ +
Sbjct: 373 PERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRVMVWNFNLEPPLL 432
Query: 363 VYPKGWRVATDLDVIIPL 380
P GW + +LD +IP+
Sbjct: 433 NVPPGWSLHKNLDAVIPV 450
>Os03g0287800 Glycosyl transferase, family 43 protein
Length = 339
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 137/249 (55%), Gaps = 32/249 (12%)
Query: 127 LLIVVTPTRARPS----QAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRTAV 182
LL+VVT T + PS +A LTRMAHTLRL+ PLLW+VV+A A LR T +
Sbjct: 97 LLVVVTTTESTPSAAGQRAAALTRMAHTLRLV-PPPLLWVVVEANPDVAATARLLRTTGL 155
Query: 183 LHRYVGCCHNI---NASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLR 239
++R++ N +A+A R HQ N AL +++HRL GV+ FA + L F LR
Sbjct: 156 MYRHLTYKDNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLR 215
Query: 240 QIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKL---------------R 284
QIR F WPV +SQ+ +VV+QGP C V GW + N R
Sbjct: 216 QIRTFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAAR 275
Query: 285 RFHLAMSGFAFNSTMLWDPKLRSHLAWNSIRHPEMVKESLQGSA-FVEQLV-EDESQMEG 342
L + GFAFNS++LWDP+ W R+P + Q S FV+Q+V ED S++ G
Sbjct: 276 PRELDVHGFAFNSSVLWDPE-----RWG--RYPTSEPDKSQDSVKFVQQVVLEDYSKVRG 328
Query: 343 IPADCSQIM 351
IP+DCS++M
Sbjct: 329 IPSDCSEVM 337
>Os05g0123100 Glycosyl transferase, family 43 protein
Length = 371
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 31/201 (15%)
Query: 177 LRRTAVLHRYVGCCHNINASAPDFRPH-QINAALDIVDNHRLDGVLYFADEEGVYSLHLF 235
LR T V++R++ N + D H Q NAAL V+ HRL GV++FAD GVY H F
Sbjct: 159 LRGTGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFF 218
Query: 236 HHLRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTT--HDGNK----------- 282
+RQI F TWPV +S +VV++GP+C +VVGW + +DG
Sbjct: 219 DEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADL 278
Query: 283 -------LRRFHLAMSGFAFNSTMLWDPKLRSHLAWNS-IRHPEMVKESLQGSAFVEQLV 334
R + +SGFAFNS++LWDP+ W P+ ++S++ FV+++V
Sbjct: 279 NPAGAAGTRAHTIDVSGFAFNSSILWDPER-----WGRPTSLPDTSQDSIK---FVQEVV 330
Query: 335 -EDESQMEGIPADCSQIMNWH 354
ED ++++GIP+DCSQIM W
Sbjct: 331 LEDRTKLKGIPSDCSQIMVWQ 351
>Os01g0157700
Length = 549
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 130/286 (45%), Gaps = 63/286 (22%)
Query: 127 LLIVVTPTRARP------SQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAA--ALR 178
LL++VT TR SQ LTR+ HTLRL+ + PLLWIVV A N T A A ALR
Sbjct: 66 LLLIVTVTRPDDDDDDGMSQEASLTRLGHTLRLV-EPPLLWIVVGAENTTATARAVNALR 124
Query: 179 RTAVLHRYVG-CCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHH 237
T V+ R++ N A D +Q+N AL + HRL GV++FA VY L F
Sbjct: 125 GTRVMFRHLTYAAENFTGPAGDEVDYQMNVALSHIQLHRLPGVVHFAAASSVYDLRFFQQ 184
Query: 238 LRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWH----------TTHD-------- 279
LRQ R A WP+ +S V L+GP C Q+ GW+ TT D
Sbjct: 185 LRQTRGIAAWPIATVSSADQTVKLEGPTCNSSQITGWYSKDSSSNITETTWDSSSNTTQT 244
Query: 280 -----GNKLRRFHLA-------------------MSGFAFNSTMLWDPK--LRSHLAWNS 313
NK + LA M F S+MLWD + R +
Sbjct: 245 TWDSSSNKTQTTTLAALDTNASKQNSSSGPPEINMHAVGFKSSMLWDSERFTRRDNSSTG 304
Query: 314 IRHPEMVKESLQGSAFVEQLVEDESQMEGIPADC--SQIMNWHVPF 357
I ++++ A + ++ DE + GIP+DC SQIM WH+
Sbjct: 305 INQ-DLIQ------AVRQMMINDEDKKRGIPSDCSDSQIMLWHLDM 343
>Os07g0694400 Glycosyl transferase, family 43 protein
Length = 338
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 50/267 (18%)
Query: 126 KLLIVVTPTRARPS---QAYYLTRMAHTLRLLHDSPLLWIVVQAG----NPTPEAAAALR 178
+L++VVT T +A LTR AH LRL+ PLLW+VV+ + P A LR
Sbjct: 81 QLVVVVTTTEQSDDSERRAAGLTRTAHALRLV-SPPLLWLVVEEAPAEKHAAPPTARLLR 139
Query: 179 RTAVLHRYVGCCHNINASAPDF-------RPHQINAALDIVDNHRLDGVLYFADEEGVYS 231
RT V+HR++ + DF R Q N AL +++HR+ GV+ F +Y
Sbjct: 140 RTGVVHRHL----LMKQGDDDFSMQISMRREQQRNVALRHIEDHRIAGVVLFGGLADIYD 195
Query: 232 LHLFHHLRQIRRFATWPVPEISQHTNEVVLQGPVC---KQGQVV--GWHTTHDGNKLRRF 286
L L HHLR IR F WPV +S + +V++QGP+C V+ GW
Sbjct: 196 LRLLHHLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMDMAAGGE 255
Query: 287 H------------LAMSGFAFNSTMLWDPKLRSHLAWNS--IRHPEMVKESLQGSAFVEQ 332
+ + GFAF+S MLWDP W+ + P+ +ES++ FV++
Sbjct: 256 RRAAADRPPPETLMEVGGFAFSSWMLWDPH-----RWDRFPLSDPDASQESVK---FVQR 307
Query: 333 LVEDE---SQMEGIP-ADCSQIMNWHV 355
+ +E S G+P +DCSQIM W +
Sbjct: 308 VAVEEYNQSTTRGMPDSDCSQIMLWRI 334
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,074,540
Number of extensions: 485985
Number of successful extensions: 937
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 911
Number of HSP's successfully gapped: 8
Length of query: 381
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 278
Effective length of database: 11,657,759
Effective search space: 3240857002
Effective search space used: 3240857002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)