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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0694400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 43 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.03 (0.0636) R2 : 0.182
β1 : -1.23 (0.24) R2dD : 0.0519 R2D : -0.00777
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.71 (0.181) R2dE : 0.17 R2E : 0.122
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.381 (0.136) R2dN8 : 0.019 R2N8 : 0.00497
σ : 1.19
deviance : 652.55
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 26.58
memory length : 1275
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
627.69 1.18 4.29 -3.7 0.0497 2.94 -2.32 -12.2 -0.509 16.3 28.26 1276 -- --
664.4 1.2 4.06 -1.09 0.175 2.05 1.49 -- -0.417 4.68 26.04 1637 -- --
640.19 1.18 4.26 -3.45 0.176 2.85 -- -10.6 -0.555 10.9 27.97 1256 -- --
650.72 1.19 4.03 -1.23 0.189 1.78 -- -- -0.386 11.4 26.5 1245 -- --
642.04 1.18 4.27 -3.4 -- 2.76 -- -10.2 -0.565 -- 27.91 1268 -- --
761.28 1.29 4.01 -0.663 0.12 -- 2.54 -- -0.32 4.28 -- -- -- --
779.08 1.31 4.02 -0.688 0.139 -- -- -- -0.334 3.18 -- -- -- --
652.55 1.19 4.03 -1.23 -- 1.71 -- -- -0.381 -- 26.58 1275 -- --
687.37 1.22 3.98 -- 0.154 1.5 -- -- -0.143 11.1 27.7 1245 -- --
780.18 1.31 4.02 -0.682 -- -- -- -- -0.331 -- -- -- -- --
791.55 1.32 4 -- 0.125 -- -- -- -0.258 3.17 -- -- -- --
688.67 1.22 3.98 -- -- 1.46 -- -- -0.144 -- 27.74 1257 -- --
792.44 1.31 4 -- -- -- -- -- -0.255 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 628.90 humidity 50 4320 < th dose dependent rect. 16 1
2 629.99 temperature 25 720 > th dose dependent rect. 18 15
3 630.29 temperature 30 4320 > th dose dependent rect. 18 1
18 631.62 humidity 50 1440 < th dose independent rect. 16 1
21 632.77 temperature 30 720 > th dose dependent rect. 18 1
36 633.98 humidity 50 1440 > th dose independent rect. 16 1
38 634.85 wind 1 90 < th dose dependent rect. 4 1
47 637.61 wind 1 90 < th dose independent rect. 4 1
83 638.06 temperature 25 1440 > th dose dependent rect. 15 18
87 638.33 humidity 50 4320 > th dose independent rect. 16 13
90 638.52 humidity 50 4320 > th dose independent rect. 16 4
91 638.55 humidity 50 4320 > th dose independent rect. 16 11
93 638.57 humidity 50 4320 > th dose independent rect. 16 17
94 638.61 humidity 50 4320 > th dose independent rect. 16 15
96 638.66 humidity 50 4320 > th dose independent rect. 16 9
100 638.70 humidity 50 4320 > th dose independent rect. 16 7
109 639.03 temperature 25 1440 > th dose dependent rect. 16 3
168 640.77 temperature 30 1440 > th dose independent sin 12 NA
169 640.81 temperature 30 1440 < th dose independent rect. 15 20
172 640.90 temperature 30 1440 < th dose independent sin 12 NA
176 640.97 temperature 30 1440 > th dose dependent sin 12 NA
182 641.16 temperature 30 1440 > th dose independent rect. 15 20
187 641.22 temperature 30 1440 > th dose independent rect. 15 4
228 641.43 temperature 30 720 > th dose independent rect. 18 15
230 641.44 temperature 25 1440 > th dose dependent rect. 21 1
261 641.87 temperature 30 1440 < th dose independent rect. 15 12
263 641.90 temperature 30 1440 < th dose independent rect. 15 14
270 641.96 temperature 30 1440 < th dose independent rect. 15 10
279 642.08 temperature 25 1440 > th dose dependent rect. 6 17
290 642.19 temperature 25 1440 > th dose dependent rect. 11 12
291 642.20 temperature 30 1440 < th dose independent rect. 15 5
301 642.31 temperature 30 1440 < th dose independent rect. 15 8
387 643.12 radiation 30 1440 > th dose independent rect. 7 1
404 643.12 temperature 30 1440 > th dose dependent rect. 10 9
424 643.18 radiation 40 14400 > th dose dependent rect. 15 1
490 643.39 radiation 30 1440 < th dose independent rect. 6 2
496 643.45 temperature 30 1440 > th dose dependent no NA NA
659 643.76 temperature 30 1440 < th dose independent rect. 9 18
666 643.80 temperature 30 1440 < th dose independent rect. 9 16
688 643.85 radiation 30 1440 < th dose independent rect. 22 10
697 643.91 temperature 30 1440 < th dose independent rect. 9 11
705 643.94 temperature 30 1440 > th dose dependent rect. 17 23
706 643.95 temperature 30 1440 < th dose independent rect. 9 14
735 644.19 temperature 30 1440 > th dose independent rect. 9 10
822 644.46 humidity 70 720 < th dose dependent rect. 18 1
848 644.55 temperature 30 1440 < th dose independent rect. 21 23
849 644.55 humidity 70 720 < th dose dependent rect. 18 13
862 644.59 temperature 30 1440 < th dose independent rect. 24 20
864 644.60 radiation 30 14400 > th dose independent rect. 16 1
881 644.60 temperature 30 1440 < th dose independent rect. 2 23
882 644.61 temperature 30 720 > th dose independent rect. 18 1
903 644.63 temperature 30 1440 < th dose independent no NA NA
906 644.63 temperature 30 1440 < th dose independent rect. 24 23
947 644.71 temperature 30 1440 < th dose independent rect. 2 18
975 644.78 temperature 30 1440 < th dose independent rect. 17 23