Os05g0123100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 43 protein.
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Os05g0123100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 43 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.9 | 0.415 | 9.95 | -0.0804 | 0.992 | -0.642 | 1.8 | 0.755 | -0.0346 | 5.46 | 0.1694 | 45 | -- | -- |
| 80.19 | 0.417 | 9.93 | -0.0115 | 1.03 | -0.727 | 2.03 | -- | 0.0148 | 4.82 | 0.3876 | 45 | -- | -- |
| 85.79 | 0.431 | 9.96 | -0.0819 | 0.995 | -0.653 | -- | 0.885 | -0.0426 | 5.33 | 0.1937 | 46 | -- | -- |
| 90.48 | 0.446 | 9.95 | -0.038 | 0.919 | -0.584 | -- | -- | -0.0346 | 5.64 | 0.3876 | 45 | -- | -- |
| 128.95 | 0.532 | 9.97 | -0.0371 | -- | -0.6 | -- | 0.838 | -0.0345 | -- | 0.1937 | 46 | -- | -- |
| 97.85 | 0.464 | 9.93 | -0.00795 | 1.16 | -- | 0.494 | -- | -0.0176 | 7.92 | -- | -- | -- | -- |
| 98.48 | 0.465 | 9.93 | 0.00703 | 1.16 | -- | -- | -- | -0.0172 | 8.04 | -- | -- | -- | -- |
| 132.03 | 0.538 | 9.97 | -0.0163 | -- | -0.596 | -- | -- | -0.0427 | -- | 0.12 | 5 | -- | -- |
| 90.51 | 0.446 | 9.95 | -- | 0.919 | -0.58 | -- | -- | -0.0303 | 5.66 | 0.3876 | 45 | -- | -- |
| 172.05 | 0.613 | 9.96 | 0.0179 | -- | -- | -- | -- | -0.00268 | -- | -- | -- | -- | -- |
| 98.48 | 0.464 | 9.93 | -- | 1.16 | -- | -- | -- | -0.018 | 8.04 | -- | -- | -- | -- |
| 132.04 | 0.537 | 9.97 | -- | -- | -0.596 | -- | -- | -0.0409 | -- | 0.12 | 5 | -- | -- |
| 172.06 | 0.612 | 9.96 | -- | -- | -- | -- | -- | -0.00467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.21 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 4 | 77.80 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 5 | 77.87 | radiation | 1 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 18 | 78.58 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 27 | 78.81 | radiation | 1 | 30 | < th | dose dependent | sin | 13 | NA |
| 50 | 79.31 | radiation | 1 | 270 | > th | dose independent | rect. | 9 | 22 |
| 53 | 79.39 | radiation | 1 | 30 | < th | dose dependent | no | NA | NA |
| 55 | 79.39 | radiation | 1 | 30 | < th | dose dependent | rect. | 11 | 21 |
| 61 | 79.39 | radiation | 1 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 62 | 79.39 | radiation | 1 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 66 | 79.43 | radiation | 1 | 90 | < th | dose independent | sin | 13 | NA |
| 71 | 79.45 | radiation | 1 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 77 | 79.53 | radiation | 1 | 90 | < th | dose independent | rect. | 21 | 23 |
| 83 | 79.60 | radiation | 1 | 30 | < th | dose dependent | rect. | 13 | 19 |
| 105 | 79.71 | radiation | 1 | 30 | < th | dose dependent | rect. | 15 | 21 |
| 141 | 79.91 | wind | 5 | 270 | < th | dose independent | rect. | 7 | 10 |
| 142 | 79.91 | radiation | 1 | 30 | < th | dose dependent | rect. | 15 | 17 |
| 173 | 80.03 | radiation | 1 | 270 | < th | dose dependent | sin | 20 | NA |
| 245 | 80.47 | radiation | 1 | 10 | < th | dose independent | rect. | 18 | 23 |
| 287 | 80.66 | radiation | 10 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 288 | 80.67 | wind | 9 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 298 | 80.70 | radiation | 1 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 307 | 80.73 | radiation | 1 | 270 | > th | dose independent | sin | 19 | NA |
| 310 | 80.74 | radiation | 1 | 270 | < th | dose independent | sin | 20 | NA |
| 311 | 80.76 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 11 |
| 390 | 81.25 | radiation | 1 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 392 | 81.26 | radiation | 1 | 90 | < th | dose independent | no | NA | NA |
| 394 | 81.27 | radiation | 1 | 30 | > th | dose independent | no | NA | NA |
| 396 | 81.27 | radiation | 1 | 30 | > th | dose independent | rect. | 5 | 14 |
| 433 | 81.27 | radiation | 1 | 30 | < th | dose independent | rect. | 11 | 21 |
| 458 | 81.27 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 459 | 81.27 | radiation | 1 | 30 | < th | dose independent | rect. | 15 | 23 |
| 545 | 81.39 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 12 |
| 551 | 81.42 | temperature | 30 | 90 | < th | dose independent | rect. | 18 | 10 |
| 569 | 81.47 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 19 |
| 581 | 81.48 | humidity | 70 | 10 | > th | dose independent | rect. | 18 | 11 |
| 584 | 81.48 | radiation | 1 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 612 | 81.57 | humidity | 70 | 90 | > th | dose independent | rect. | 18 | 10 |
| 615 | 81.57 | radiation | 1 | 30 | < th | dose independent | rect. | 15 | 21 |
| 641 | 81.64 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 11 |
| 645 | 81.66 | radiation | 1 | 30 | < th | dose dependent | rect. | 18 | 14 |
| 692 | 81.77 | radiation | 1 | 30 | < th | dose independent | rect. | 15 | 17 |
| 714 | 81.80 | temperature | 25 | 270 | < th | dose independent | sin | 17 | NA |
| 739 | 81.88 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 10 |
| 766 | 81.95 | humidity | 50 | 270 | > th | dose independent | rect. | 15 | 11 |
| 864 | 82.02 | wind | 9 | 270 | < th | dose dependent | sin | 20 | NA |
| 974 | 82.25 | humidity | 70 | 90 | > th | dose independent | sin | 15 | NA |