Os10g0205300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 43 protein.
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Os10g0205300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 43 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.53 | 0.337 | 10.4 | -0.285 | 1.56 | -0.827 | 0.535 | 3.41 | 0.00657 | 5.64 | 23.72 | 164 | -- | -- |
| 56.43 | 0.35 | 10.5 | -0.806 | 1.67 | -0.555 | 0.16 | -- | -0.139 | 5.65 | 24.82 | 63 | -- | -- |
| 52.06 | 0.336 | 10.4 | -0.37 | 1.56 | -0.823 | -- | 2.83 | -0.02 | 5.68 | 23.82 | 133 | -- | -- |
| 55.99 | 0.349 | 10.5 | -0.795 | 1.63 | -0.55 | -- | -- | -0.161 | 5.64 | 24.8 | 87 | -- | -- |
| 125.63 | 0.522 | 10.4 | 0.278 | -- | -2.3 | -- | 6 | 0.222 | -- | 24.4 | 294 | -- | -- |
| 61.02 | 0.366 | 10.5 | -0.887 | 1.83 | -- | 0.135 | -- | -0.21 | 5.41 | -- | -- | -- | -- |
| 61.06 | 0.366 | 10.5 | -0.887 | 1.83 | -- | -- | -- | -0.21 | 5.41 | -- | -- | -- | -- |
| 140.42 | 0.552 | 10.5 | -0.533 | -- | -1.82 | -- | -- | 0.0102 | -- | 24.3 | 272 | -- | -- |
| 71.38 | 0.393 | 10.5 | -- | 1.54 | -0.768 | -- | -- | -0.0143 | 5.75 | 22.81 | 122 | -- | -- |
| 235.44 | 0.717 | 10.5 | -0.825 | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
| 81.8 | 0.423 | 10.5 | -- | 1.81 | -- | -- | -- | -0.112 | 5.43 | -- | -- | -- | -- |
| 147.6 | 0.566 | 10.5 | -- | -- | -1.9 | -- | -- | 0.0798 | -- | 24.2 | 269 | -- | -- |
| 253.4 | 0.743 | 10.5 | -- | -- | -- | -- | -- | -0.0738 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 3 | 48.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 6 | 48.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 10 | 48.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 16 |
| 13 | 49.08 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 14 | 49.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 16 |
| 17 | 49.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 25 | 49.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 34 | 49.57 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 35 | 49.59 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 43 | 49.69 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 44 | 49.71 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 45 | 49.73 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 47 | 49.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 50 | 49.77 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 19 |
| 59 | 49.91 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 65 | 49.97 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 69 | 50.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 70 | 50.02 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 76 | 50.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 79 | 50.09 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 82 | 50.12 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 84 | 50.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 91 | 50.15 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 118 | 50.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 144 | 50.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 158 | 50.51 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 162 | 50.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 179 | 50.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 188 | 50.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 189 | 50.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 192 | 50.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 206 | 50.76 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 219 | 50.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 226 | 50.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 237 | 50.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 243 | 50.88 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 249 | 50.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 6 |
| 251 | 50.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 254 | 50.91 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 255 | 50.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 16 |
| 256 | 50.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 261 | 50.94 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 283 | 51.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 284 | 51.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 287 | 51.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 288 | 51.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 293 | 51.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 294 | 51.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 303 | 51.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 316 | 51.08 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 18 |
| 320 | 51.10 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 323 | 51.12 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 327 | 51.12 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 17 |
| 342 | 51.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 15 | 13 |
| 343 | 51.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 352 | 51.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 353 | 51.19 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 8 |
| 366 | 51.22 | wind | 1.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 372 | 51.23 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 6 |
| 377 | 51.24 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 392 | 51.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 395 | 51.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 421 | 51.33 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 423 | 51.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 455 | 51.39 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 472 | 51.43 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 487 | 51.44 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 501 | 51.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 515 | 51.47 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 12 |
| 520 | 51.48 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 523 | 51.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 533 | 51.50 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 542 | 51.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 555 | 51.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 563 | 51.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 570 | 51.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 573 | 51.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 606 | 51.59 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 7 |
| 610 | 51.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 18 |
| 619 | 51.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 18 |
| 621 | 51.60 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 636 | 51.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 8 |
| 638 | 51.62 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 13 |
| 645 | 51.63 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 651 | 51.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 653 | 51.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 658 | 51.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 660 | 51.65 | temperature | 25.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 669 | 51.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 9 |
| 674 | 51.67 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 4 |
| 696 | 51.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 712 | 51.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 6 |
| 743 | 51.75 | temperature | 25.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 751 | 51.76 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 758 | 51.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 769 | 51.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 771 | 51.78 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 775 | 51.79 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 779 | 51.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 783 | 51.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 792 | 51.81 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 813 | 51.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 822 | 51.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 845 | 51.86 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 9 |
| 885 | 51.88 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 919 | 51.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 933 | 51.92 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 941 | 51.93 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 947 | 51.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 948 | 51.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 960 | 51.95 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 964 | 51.95 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 977 | 51.96 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 979 | 51.96 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 989 | 51.96 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |