Os03g0793100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 43 protein.
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Os03g0793100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 43 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.3 | 0.368 | 8.61 | 0.561 | 1.58 | 1.36 | -0.482 | 1.29 | 0.649 | 22.5 | 21.02 | 7149 | -- | -- |
| 63.35 | 0.371 | 8.67 | 0.559 | 1.59 | 1.16 | -0.279 | -- | 0.574 | 22.3 | 22 | 8041 | -- | -- |
| 61.92 | 0.366 | 8.61 | 0.522 | 1.57 | 1.39 | -- | 1.27 | 0.631 | 22.5 | 21.02 | 7989 | -- | -- |
| 62.91 | 0.369 | 8.67 | 0.478 | 1.58 | 1.06 | -- | -- | 0.581 | 22.5 | 22 | 8054 | -- | -- |
| 210.41 | 0.676 | 8.58 | 0.719 | -- | 1.42 | -- | 1.24 | 0.614 | -- | 21.6 | 5248 | -- | -- |
| 92.03 | 0.45 | 8.58 | 1.17 | 1.61 | -- | -0.415 | -- | 0.997 | 22.5 | -- | -- | -- | -- |
| 92.74 | 0.451 | 8.58 | 1.19 | 1.61 | -- | -- | -- | 0.998 | 22.6 | -- | -- | -- | -- |
| 200.32 | 0.659 | 8.62 | 0.701 | -- | 1.45 | -- | -- | 0.65 | -- | 24.6 | 3791 | -- | -- |
| 64.79 | 0.375 | 8.68 | -- | 1.59 | 1.36 | -- | -- | 0.518 | 22.5 | 21.1 | 8095 | -- | -- |
| 251.99 | 0.742 | 8.54 | 1.22 | -- | -- | -- | -- | 1 | -- | -- | -- | -- | -- |
| 130.11 | 0.534 | 8.61 | -- | 1.62 | -- | -- | -- | 0.865 | 22.6 | -- | -- | -- | -- |
| 195.58 | 0.651 | 8.66 | -- | -- | 1.63 | -- | -- | 0.455 | -- | 25.2 | 2256 | -- | -- |
| 291.24 | 0.797 | 8.57 | -- | -- | -- | -- | -- | 0.87 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 11 | 62.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 13 | 62.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 14 | 62.91 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 19 |
| 16 | 62.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 34 | 63.04 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 21 |
| 48 | 63.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 70 | 63.14 | temperature | 25 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 86 | 63.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 91 | 63.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 22 |
| 94 | 63.19 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 108 | 63.20 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 151 | 63.28 | temperature | 25 | 4320 | < th | dose dependent | sin | 11 | NA |
| 163 | 63.29 | temperature | 25 | 4320 | < th | dose dependent | sin | 9 | NA |
| 206 | 63.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 11 |
| 304 | 63.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 335 | 63.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 346 | 63.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 468 | 63.79 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 503 | 63.84 | temperature | 15 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 513 | 63.85 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 624 | 64.01 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 707 | 64.09 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 798 | 64.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 828 | 64.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 907 | 64.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 13 |