BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0653200 Os04g0653200|AB112773
(417 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0653200 Similar to Low affinity calcium transporter CA... 803 0.0
Os03g0397400 Similar to Low affinity calcium transporter CA... 600 e-172
Os01g0557500 Cation/proton exchanger 1a 317 1e-86
Os05g0594200 Similar to Cation/proton exchanger 1a 314 6e-86
Os02g0314100 Calcium/proton exchanger family protein 251 9e-67
Os02g0138900 Sodium/calcium exchanger membrane region domai... 133 3e-31
AK072134 130 1e-30
>Os04g0653200 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 417
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/417 (95%), Positives = 400/417 (95%)
Query: 1 MENPQIEMGAFKANGPQLQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFG 60
MENPQIEMGAFKANGPQLQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFG
Sbjct: 1 MENPQIEMGAFKANGPQLQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFG 60
Query: 61 PASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEM 120
PASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEM
Sbjct: 61 PASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEM 120
Query: 121 IIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGL 180
IIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGL
Sbjct: 121 IIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGL 180
Query: 181 LLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPI 240
LLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPI
Sbjct: 181 LLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPI 240
Query: 241 GXXXXXXXXXXXXXXXXXIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFI 300
G IGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFI
Sbjct: 241 GSEEMPNEDAAEEDEESEIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFI 300
Query: 301 SVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMD 360
SVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMD
Sbjct: 301 SVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMD 360
Query: 361 LNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
LNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD
Sbjct: 361 LNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
>Os03g0397400 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 437
Score = 600 bits (1548), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/416 (72%), Positives = 351/416 (84%), Gaps = 3/416 (0%)
Query: 3 NPQIEMGAFKANGPQLQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFGPA 62
+P A K ++ G +++ +S + AL S+R+VI +K+N+LLPFGP
Sbjct: 23 SPSPMTAAGKMQALDFEHIGSLAAVAESLSTGSKWRRALTSVRVVILQAKINVLLPFGPL 82
Query: 63 SIILHYTTSRH-GLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMI 121
+++LHY ++ H G VFLFS++GITPLAERLGYATEQLA+YTGPT+GGLLNATFGNATEMI
Sbjct: 83 AVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMI 142
Query: 122 IAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLL 181
I++YALKNGMIRVVQQSLLGSILSNMLLV+GCAFFAGG+VH ++DQVF+KA+AVVNSGLL
Sbjct: 143 ISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLL 202
Query: 182 LMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPIG 241
LMAV+GLMFPAVLHFTHSEV+ G SEVSLSRFSSCIMLVAYASYL+FQL + + YSPIG
Sbjct: 203 LMAVLGLMFPAVLHFTHSEVQYGKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPIG 262
Query: 242 XXXXXXXXXXXXXXXXXIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFIS 301
G E+I WL +LT+W+SILS YLV+AI+GAS+SLN+PVAFIS
Sbjct: 263 EQEEEVTEDEEEEKEITQG--EAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFIS 320
Query: 302 VILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDL 361
VILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGW+MGQ+MDL
Sbjct: 321 VILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDL 380
Query: 362 NFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
NFQLFETATLFITVLVVAFMLQ+G +NY KGLMLILCYLIVAASFFVHVDP SS++
Sbjct: 381 NFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNN 436
>Os01g0557500 Cation/proton exchanger 1a
Length = 451
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/378 (47%), Positives = 249/378 (65%), Gaps = 9/378 (2%)
Query: 41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAI 100
L +++ V +KL +L P P +I VF S+LG+ PLAER+ + TEQ+A+
Sbjct: 54 LANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIAL 113
Query: 101 YTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGI 160
YTGPTVGGLLNAT GNATE+IIA++AL G I VV+ SLLGS+LSN+LLV+G + F GG+
Sbjct: 114 YTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGV 173
Query: 161 VHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASE------VSLSRFS 214
V+ Q + + + V++ LL +AV+ P +L + + S + LSR
Sbjct: 174 VNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRAC 233
Query: 215 SCIMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXXXIGMWESIAWLAMLTLW 274
S +ML +Y +YL+FQL + P +G ++ WLA++T
Sbjct: 234 SFVMLASYVAYLFFQLKTHRQLFEP---QEVDGGDAGDDDEEPALGFASALFWLALMTAV 290
Query: 275 VSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAI 334
+S+LSEY+V IE S S L V+FIS+ILLPIVGNAAEHA AI+FA+K+KLDITLGVA+
Sbjct: 291 ISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVAL 350
Query: 335 GSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLM 394
GS+TQISMFV+P V++ W+MG +MDL+F+L ET +LF+ VLV AF LQDG ++YLKG++
Sbjct: 351 GSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGIL 410
Query: 395 LILCYLIVAASFFVHVDP 412
L+LCY+++ A FFV P
Sbjct: 411 LLLCYIVIGACFFVARQP 428
>Os05g0594200 Similar to Cation/proton exchanger 1a
Length = 453
Score = 314 bits (805), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 76 VFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVV 135
VF+ S++G+ PLAERL + TEQ+A YTGPTVGGLLNATFGN TE+IIA+ AL+ G I VV
Sbjct: 97 VFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVV 156
Query: 136 QQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLH 195
+ SLLGSILSN+LLV+G + F GI + Q + A VN+ LL++AV+ P +L
Sbjct: 157 KCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLR 216
Query: 196 FT----HSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXX 251
+ + G + + LSR S +ML+AY +YL+FQL+ + P
Sbjct: 217 YAVTSGDHAIVSGDAALHLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDDDLV 276
Query: 252 XXXXXXXI-GMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGN 310
+ G ++ WLA++TL ++LS Y+V+ IE AS+S L V+FIS+ILLPIVGN
Sbjct: 277 IAQDDEPVLGFSSAMIWLALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGN 336
Query: 311 AAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETAT 370
AAEHA A++FA+K+K+DITLGV++GS+TQISMFV+P V++ W MG MDL+F L ET +
Sbjct: 337 AAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGS 396
Query: 371 LFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFV 408
LF+ +LV AF LQ+G ++YLKGL+L+LCY +++ FFV
Sbjct: 397 LFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434
>Os02g0314100 Calcium/proton exchanger family protein
Length = 450
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 226/378 (59%), Gaps = 2/378 (0%)
Query: 33 LQRFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLG 92
L+R + ++ V+ +KL L P ++ VF FS++G+ PLAER+
Sbjct: 61 LRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVS 120
Query: 93 YATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMG 152
+ +E +A GPT GG++NAT GN E+IIA++AL + +++ SLLGSILSN+LLV+G
Sbjct: 121 FLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLG 180
Query: 153 CAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHS--EVRQGASEVSL 210
+ GGIV+ K++ K A V+ GLLL+ V+ + V +T S + +S + L
Sbjct: 181 SSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQL 240
Query: 211 SRFSSCIMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXXXIGMWESIAWLAM 270
SR + +ML+AY L FQL + IG ++ WL
Sbjct: 241 SRSCAIVMLIAYFGSLMFQLKTHRQIFELEEDSSDSSSSEDDATDKSVIGFASAMVWLIG 300
Query: 271 LTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITL 330
+ + ++LS Y+V IE AS+S+ +PV FIS+ILLPIVGNAAEHA AI+FA K+K+DI+L
Sbjct: 301 MAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISL 360
Query: 331 GVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYL 390
G+ +GS+TQISM V+P +++ W+ MDL+F L ET +L + V+ AF LQD +YL
Sbjct: 361 GITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYL 420
Query: 391 KGLMLILCYLIVAASFFV 408
KGL L+ Y+++A FFV
Sbjct: 421 KGLNLVFSYIVIAVCFFV 438
>Os02g0138900 Sodium/calcium exchanger membrane region domain containing protein
Length = 129
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 79/100 (79%)
Query: 74 GLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIR 133
G VF SMLGI PLAERLG+ATEQLA++TGP VG LLN+ FGNATE+II+I+AL G +
Sbjct: 21 GWVFPLSMLGIIPLAERLGFATEQLALFTGPKVGRLLNSAFGNATELIISIHALSRGKLH 80
Query: 134 VVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKAT 173
VVQQ LLGSILSN+LLV+G AFF+GG+ Q FSK T
Sbjct: 81 VVQQCLLGSILSNLLLVLGSAFFSGGLACGKTMQTFSKVT 120
>AK072134
Length = 183
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 84/111 (75%)
Query: 76 VFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVV 135
VF+ S++G+ PLAERL + TEQ+A YTGPTVGGLLNATFGN TE+IIA+ AL+ G I VV
Sbjct: 46 VFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVV 105
Query: 136 QQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVM 186
+ SLLGSILSN+LLV+G + F GI + Q + A VN+ LL++AV+
Sbjct: 106 KCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVL 156
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,374,283
Number of extensions: 378853
Number of successful extensions: 936
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 926
Number of HSP's successfully gapped: 7
Length of query: 417
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 314
Effective length of database: 11,657,759
Effective search space: 3660536326
Effective search space used: 3660536326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)