BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0578000 Os04g0578000|AK064250
(483 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate s... 939 0.0
Os05g0196600 496 e-140
Os05g0319200 474 e-134
Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (... 473 e-133
Os01g0192900 1-aminocyclopropane-1-carboxylate synthase fam... 461 e-130
Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate s... 369 e-102
Z27244 184 2e-46
Z27243 177 2e-44
Z27241 75 1e-13
Os07g0108300 Similar to Alanine aminotransferase 69 8e-12
Os01g0871300 1-aminocyclopropane-1-carboxylate synthase fam... 65 1e-10
>Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 483
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/447 (100%), Positives = 447/447 (100%)
Query: 1 MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI 60
MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI
Sbjct: 1 MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI 60
Query: 61 EEWSKNHPEASICTPEGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVV 120
EEWSKNHPEASICTPEGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVV
Sbjct: 61 EEWSKNHPEASICTPEGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVV 120
Query: 121 MSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTK 180
MSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTK
Sbjct: 121 MSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTK 180
Query: 181 EALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAG 240
EALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAG
Sbjct: 181 EALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAG 240
Query: 241 SVFATPEYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARR 300
SVFATPEYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARR
Sbjct: 241 SVFATPEYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARR 300
Query: 301 MSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAG 360
MSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAG
Sbjct: 301 MSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAG 360
Query: 361 LFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETM 420
LFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETM
Sbjct: 361 LFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETM 420
Query: 421 EVALGRIHDFVRQHQQRRVKAERWAAN 447
EVALGRIHDFVRQHQQRRVKAERWAAN
Sbjct: 421 EVALGRIHDFVRQHQQRRVKAERWAAN 447
>Os05g0196600
Length = 437
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/430 (57%), Positives = 305/430 (70%), Gaps = 15/430 (3%)
Query: 18 HGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLIEEWSKNHPEASICTPEG 77
HGE+S YF GW+AYD +P+D N GVIQMGLAENQ+S DL+EE+ + HPEAS C
Sbjct: 7 HGEDSPYFAGWRAYDEDPYDPITNPQGVIQMGLAENQVSFDLLEEYMREHPEASDCG--- 63
Query: 78 VSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGATGAQETLAFCLA 137
+ + A FQDYHGL FRKAMA FM +RGGKA FDPDRVV++ GAT A E L F LA
Sbjct: 64 -AGVRENALFQDYHGLKSFRKAMASFMETIRGGKARFDPDRVVLTAGATAANELLTFILA 122
Query: 138 NPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSAYDGARRQGISV 197
+PG+A LVPTPYYP FDRD WR+G+ ++P+ C S F++T AL +AYD A G V
Sbjct: 123 DPGDALLVPTPYYPGFDRDLRWRTGVNIVPVSCDSAAGFQVTAGALRAAYDEAVAAGTRV 182
Query: 198 KGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVFATPEYVSIAEVIE- 256
+G+LITNPSNPLGT R L + F H +HL+ DEIY+GSVFA P+ VS+AE+++
Sbjct: 183 RGVLITNPSNPLGTTAARGVLEGILDFVARHDMHLISDEIYSGSVFAAPDLVSVAELVDE 242
Query: 257 ----RDVPWCNRDL---IHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSFGLVSS 309
R D+ +HVVYSLSKD GLPGFRVG++YSYNDAVVAAARRMSSF LVSS
Sbjct: 243 RRRARGGAADAEDIARRVHVVYSLSKDLGLPGFRVGVVYSYNDAVVAAARRMSSFTLVSS 302
Query: 310 QTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRG-NAGLFSWMDLR 368
QTQ LA MLSD F +++ ++ RL RH R +GLR G+ CLRG NAGLF W+D+R
Sbjct: 303 QTQRTLAAMLSDAAFAAAYVRSNRDRLRERHARAVAGLRRAGVACLRGANAGLFVWVDMR 362
Query: 369 RML--REKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETMEVALGR 426
R+L E T EL LWR +V + KLN+SPG+S HCREPGWFRVC ANM ET++VAL R
Sbjct: 363 RLLGDGEATVAGELRLWRRVVAEAKLNISPGSSCHCREPGWFRVCFANMSLETLDVALHR 422
Query: 427 IHDFVRQHQQ 436
+ F+++ +Q
Sbjct: 423 LGCFIKKWEQ 432
>Os05g0319200
Length = 496
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/443 (54%), Positives = 303/443 (68%), Gaps = 20/443 (4%)
Query: 9 LSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLIEEWSKNHP 68
LS A HGE S YF GWKAYD +P+D N GVIQMGLAENQ+S+DL+E + + HP
Sbjct: 19 LSRVATSAAHGEGSPYFAGWKAYDEDPYDAAANPDGVIQMGLAENQVSIDLLEGYLREHP 78
Query: 69 EAS---ICTPEGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGA 125
EA+ + G F+ A FQDYHGL FRKAMA+FM ++ GGKATFDPDR+V++ GA
Sbjct: 79 EAAAWGVAGDGGGDSFRDNALFQDYHGLANFRKAMARFMEKIMGGKATFDPDRIVLTAGA 138
Query: 126 TGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVS 185
T A E L F LA+P +A L+PTPYYP FDRD WR+G+ ++P+ C S N F++T AL +
Sbjct: 139 TAANELLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVPVHCDSANGFQVTAAALQA 198
Query: 186 AYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVFAT 245
A+D A G+ V+G+LITNPSNPLGT R+ L + F + +HLV DEIY+GSVFA
Sbjct: 199 AHDEAAAAGMRVRGVLITNPSNPLGTTARREALEGILGFVARNDIHLVSDEIYSGSVFAA 258
Query: 246 PEYVSIAEVIERDVPWCNR------------DLIHVVYSLSKDFGLPGFRVGIIYSYNDA 293
P+ VS+AE++E D +HVVYSLSKD GLPGFRVG++YS NDA
Sbjct: 259 PDLVSVAELVESSSSRARHRGEDDDGDVGVADRVHVVYSLSKDLGLPGFRVGVVYSRNDA 318
Query: 294 VVAAARRMSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIG 353
VVAAARRMSSF LVSSQTQ LA +LSDE F+ ++ ++ RL RH+ +GL G+
Sbjct: 319 VVAAARRMSSFTLVSSQTQRTLAAVLSDEAFVDAYVAANRARLRERHDHVVAGLARAGVP 378
Query: 354 CLRGNAGLFSWMDLRRMLREKTAEA-----ELELWRVIVHQVKLNVSPGTSFHCREPGWF 408
CLRGNAGLF WMD+RR+L +A EL LW ++ +VKLNVSPG+S HC EPGWF
Sbjct: 379 CLRGNAGLFVWMDMRRLLLGDGGDAATFAGELRLWDRLLREVKLNVSPGSSCHCSEPGWF 438
Query: 409 RVCHANMDDETMEVALGRIHDFV 431
RVC ANM T++VAL RI F+
Sbjct: 439 RVCFANMSLATLDVALERISRFM 461
>Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (EC 4.4.1.14) (ACC
synthase 1) (S-adenosyl-L-methionine
methylthioadenosine-lyase 1)
Length = 487
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/437 (54%), Positives = 308/437 (70%), Gaps = 6/437 (1%)
Query: 1 MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI 60
+A + LLS KA + HG++SSYF GW+ Y+ NPFD N G+IQMGLAENQLS DL+
Sbjct: 6 VAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLL 65
Query: 61 EEWSKNHPEASICTPEG--VSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDR 118
EEW + +P A EG S F+ +A FQDYHGLP F+ A+A+FM + RG K FDP
Sbjct: 66 EEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSN 125
Query: 119 VVMSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRL 178
+V++ GAT A E L FCLA+ G+AFL+PTPYYP FDRD WR+G +++P+ C S N FR+
Sbjct: 126 IVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRV 185
Query: 179 TKEALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIY 238
T+ AL AY A+++ + VKG+LITNPSNPLGT + R L + F +HL+ DEIY
Sbjct: 186 TRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIY 245
Query: 239 AGSVFATPE--YVSIAEVIE-RDVPWCN-RDLIHVVYSLSKDFGLPGFRVGIIYSYNDAV 294
AG+ FA P +VS EV+ RD + D +HVVYSLSKD GLPGFRVG IYS N AV
Sbjct: 246 AGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYSANAAV 305
Query: 295 VAAARRMSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGC 354
V+AA +MSSFGLVSSQTQY LA +L D +F ++ E+K R+ RH++ GLRE+GIGC
Sbjct: 306 VSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGC 365
Query: 355 LRGNAGLFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHAN 414
L NAGLF W+D+ ++R ++ E+ELW+ +V +V LN+SPG+S HCREPGWFRVC AN
Sbjct: 366 LPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFAN 425
Query: 415 MDDETMEVALGRIHDFV 431
M +T++VA+ R+ FV
Sbjct: 426 MSAKTLDVAMQRLRSFV 442
>Os01g0192900 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 461
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/426 (55%), Positives = 297/426 (69%), Gaps = 3/426 (0%)
Query: 9 LSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLIEEWSKNHP 68
LS A HGE+S YF GWKAYD +P+ N GVIQMGLAENQ+S DL+E + ++HP
Sbjct: 18 LSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHP 77
Query: 69 EASICTP--EGVSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGAT 126
EA+ + G F+ A FQDYHGL FRKAMA FMG++RGGKA FDPD +V++ GAT
Sbjct: 78 EAAGWSTGGAGAGSFRDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGAT 137
Query: 127 GAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSA 186
A E L F LANPG+A L+PTPYYP FDRD WR+G+ ++P+ C S N F++T AL +A
Sbjct: 138 AANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVAALQAA 197
Query: 187 YDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVFATP 246
YD A G+ + +LITNPSNPLGT R L + F + + +HL+ DEIY+GSVFA P
Sbjct: 198 YDEAAAVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAP 257
Query: 247 EYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSFGL 306
+ VS+AE++E +H+VYSLSKD GLPGFRVG++YSYNDAVV AARRMSSF L
Sbjct: 258 DLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMSSFTL 317
Query: 307 VSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAGLFSWMD 366
VSSQTQ LA MLSDE F G +++ ++ RL RHE +GL G+ CLRGNAGLF WMD
Sbjct: 318 VSSQTQKTLAAMLSDEAFAGEYIRTNRRRLRERHEHVVAGLARAGVPCLRGNAGLFVWMD 377
Query: 367 L-RRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETMEVALG 425
+ R +L EL LW ++ Q KLN+SPG+S HC E GWFRVC ANM +T+++AL
Sbjct: 378 MRRLLLGGGGVGGELRLWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLDTLDLALH 437
Query: 426 RIHDFV 431
RI F+
Sbjct: 438 RISRFM 443
>Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 542
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 270/422 (63%), Gaps = 7/422 (1%)
Query: 20 ENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLIEEWSKNHPEASICTPEGVS 79
++S Y+ G + +P+ N G+IQ+GLAEN LSLDL+ W + H + G
Sbjct: 119 DDSLYYAGLRRCAADPYHPVTNPSGIIQLGLAENYLSLDLVGRWMEEHAAEAASMAGGED 178
Query: 80 QFKR------IANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGATGAQETLA 133
+ +R +A +Q Y G+ + A+A FM Q+ G +F+P +VV++ GAT A E L+
Sbjct: 179 EDERELSIRGLAAYQPYDGILALKMALAGFMRQIMQGSVSFEPSQVVITSGATPAMEILS 238
Query: 134 FCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSAYDGARRQ 193
FCLA+PG AFLVP+PYYP +DRD WR+GI+L+P+ C S ++F ++ AL AY+ A+++
Sbjct: 239 FCLADPGNAFLVPSPYYPGWDRDIKWRTGIELIPVPCRSTDNFNISITALEIAYNQAKKR 298
Query: 194 GISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVFATPEYVSIAE 253
GI V+G+LI+NP+NP G+ + TL L FA E +HL+ DE++AGS + + ++VS+AE
Sbjct: 299 GIKVRGVLISNPNNPTGSFVPKQTLHDLLEFAAEKNIHLISDEVFAGSTYGSGKFVSVAE 358
Query: 254 VIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSFGLVSSQTQY 313
V++ D+ ++ +H++Y LSKD L GFRVG+IYSYN+++V AA +++ F VS+ TQ
Sbjct: 359 VVD-DLEDFDKGRVHIIYGLSKDLSLAGFRVGVIYSYNESIVTAAAKIARFSSVSTPTQR 417
Query: 314 FLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAGLFSWMDLRRMLRE 373
L MLSD++FI +L+ ++ RL + F L +VGI C + + G + W D+ + +R
Sbjct: 418 LLVAMLSDQKFISDYLKVNRERLRKMYHLFVDALDQVGIECYKSSGGFYCWADMSKFIRS 477
Query: 374 KTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETMEVALGRIHDFVRQ 433
+ + E +LW ++ + K+NV+PG+S HC EPGWFR C + + + V + R+
Sbjct: 478 YSEKGERKLWDRLLEEAKVNVTPGSSCHCIEPGWFRCCFTTLSEHDIPVLVQRLRTITDS 537
Query: 434 HQ 435
H+
Sbjct: 538 HK 539
>Z27244
Length = 124
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%)
Query: 284 VGIIYSYNDAVVAAARRMSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERF 343
VGI+YSYND VV AR+MSSFGLVSSQTQ+ +A+MLSDEEF+ F++ESK RL ARH
Sbjct: 1 VGIVYSYNDRVVQIARKMSSFGLVSSQTQHLIAKMLSDEEFVDEFIRESKLRLAARHAEI 60
Query: 344 TSGLREVGIGCLRGNAGLFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCR 403
T+GL +GIG L+ AGLF WMDLR +L+ T ++E ELWRVIVHQVKLNVSPG SFHC
Sbjct: 61 TTGLDGLGIGWLKAKAGLFLWMDLRNLLKTATFDSETELWRVIVHQVKLNVSPGGSFHCH 120
Query: 404 EPGW 407
EPGW
Sbjct: 121 EPGW 124
>Z27243
Length = 124
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 98/124 (79%)
Query: 284 VGIIYSYNDAVVAAARRMSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERF 343
VG++YSYND VV+ ARRMSSFGLVSSQTQ FLA MLSD+ F+ FL E R+ RH F
Sbjct: 1 VGVVYSYNDVVVSCARRMSSFGLVSSQTQSFLAAMLSDQSFVDNFLVEVSKRVAKRHHMF 60
Query: 344 TSGLREVGIGCLRGNAGLFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCR 403
T GL E+GI CLR NAGLF MDLR ML+++T ++E+ LWRV +++VK+NVSPG+SFHC
Sbjct: 61 TEGLEEMGISCLRSNAGLFVLMDLRHMLKDQTFDSEMALWRVTINKVKINVSPGSSFHCS 120
Query: 404 EPGW 407
EPGW
Sbjct: 121 EPGW 124
>Z27241
Length = 64
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 211 TITDRDTLAMLATFATEHRVHLVCDEIYAGSVFATPEYVSIAEVIERDVPWCNRDLIHVV 270
T DR+ L L F + +HL+ DEIYA + F E++S+AEVIE ++ CNRDLIH+V
Sbjct: 1 TTLDRECLKSLVNFTNDKGIHLIADEIYAATTFGQSEFISVAEVIE-EIEDCNRDLIHIV 59
Query: 271 YSLSK 275
YSLSK
Sbjct: 60 YSLSK 64
>Os07g0108300 Similar to Alanine aminotransferase
Length = 485
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 84 IANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGAT-GAQETLAFCLANPGEA 142
+ + D G+P RK +A+F+ + R G + DP+ + ++ GA+ G + L + N +
Sbjct: 107 LGAYSDSRGIPGIRKEVAEFI-ERRDGYPS-DPELIYLTDGASKGVMQMLNTIIRNERDG 164
Query: 143 FLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSAYDGARRQGISVKGILI 202
LVP P YP + G L+P ++ L L AR +GI+V+ ++I
Sbjct: 165 ILVPVPQYPLYSAAISLFGG-SLVPYYLEEEANWGLDFVNLRQTVASARSKGITVRAMVI 223
Query: 203 TNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVF 243
NP NP G + L F + L+ DE+Y +++
Sbjct: 224 INPGNPTGQCLSEGNIKELLKFCFHENLVLLADEVYQQNIY 264
>Os01g0871300 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 458
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 92 GLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGATG--AQETLAFCLANPGEAFLVPTPY 149
G E RKA+ + + G ++ PD+V++S GA Q LA C +PG+ L+P PY
Sbjct: 119 GTLELRKAICNKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVC--SPGDEVLIPAPY 174
Query: 150 YPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSAYDGARRQGISVKGILITNPSNPL 209
+ ++ + +G + + +F L E L S + R +++ +PSNP
Sbjct: 175 WVSYP-EMATLAGATPVILPTSISENFLLRPELLASKINEKSRL------LILCSPSNPT 227
Query: 210 GTITDRDTLAMLATFATEH-RVHLVCDEIYAGSVFATPEYVSIAEVIERDVPWCNRDLIH 268
G++ ++ L +A ++ R+ ++ DEIY ++ ++ S A + W D
Sbjct: 228 GSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGM---W---DRTL 281
Query: 269 VVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSF 304
V SK F + G+R+G + + V A + S F
Sbjct: 282 TVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQF 317
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,130,741
Number of extensions: 685217
Number of successful extensions: 1402
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1394
Number of HSP's successfully gapped: 11
Length of query: 483
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 378
Effective length of database: 11,553,331
Effective search space: 4367159118
Effective search space used: 4367159118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)