BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0511200 Os04g0511200|X89891
(244 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD 504 e-143
Os04g0510900 Similar to Embryo-specific protein 1 (ATS1) 333 5e-92
Os06g0254700 Caleosin related family protein 168 3e-42
Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD 147 5e-36
Os02g0734500 107 7e-24
Os03g0222600 Caleosin related family protein 107 1e-23
Os02g0734400 Caleosin related family protein 103 9e-23
AK110656 97 1e-20
Os06g0254300 Caleosin related family protein 92 4e-19
>Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD
Length = 244
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MAEEAASKAAPTDALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEG 60
MAEEAASKAAPTDALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEG
Sbjct: 1 MAEEAASKAAPTDALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEG 60
Query: 61 RDHRQMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLP 120
RDHRQMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLP
Sbjct: 61 RDHRQMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLP 120
Query: 121 SWIPSLLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWR 180
SWIPSLLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWR
Sbjct: 121 SWIPSLLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWR 180
Query: 181 MTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAH 240
MTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAH
Sbjct: 181 MTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAH 240
Query: 241 EKQK 244
EKQK
Sbjct: 241 EKQK 244
>Os04g0510900 Similar to Embryo-specific protein 1 (ATS1)
Length = 310
Score = 333 bits (855), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 154/232 (66%), Positives = 188/232 (81%), Gaps = 3/232 (1%)
Query: 13 DALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEGRDH--RQMSVLQ 70
D+L+ VA ++PVT ERPVR DLE +PKPYLARAL APD+YHP+GT DH +SVLQ
Sbjct: 78 DSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYHPDGTTTDDHEHHHLSVLQ 137
Query: 71 QHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLPSWIPSLLFPI 130
QHVAFFD D +GI+YPWETY G R LGFN+I+SF +A+ +NV +SYPTLP W+PS FPI
Sbjct: 138 QHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPI 197
Query: 131 HIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTEGQRVALD 190
+I NIHR+KHGSDS TYDNEGRFMPVNFE+IFSK ART+PD+LT+ ++W+MTEG R LD
Sbjct: 198 YIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLD 257
Query: 191 LLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAHEK 242
L G A+K EW +LYVLA+DEEG+L +EA+RR +DGSLFE +A Q RE H K
Sbjct: 258 LFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQ-REQHAK 308
>Os06g0254700 Caleosin related family protein
Length = 215
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
Query: 46 ALVAPDVYHPEGTEGRDHR-QMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSF 104
A+V + + G E +R +++ LQ+HVAFFD + DGI+YP ETY G R +G V++S
Sbjct: 17 AVVRDNNNNAGGGEAEVYRSELTPLQKHVAFFDRNKDGIIYPSETYQGFRAIGAGVVLSA 76
Query: 105 FLAIAINVGLSYPTLPSWIPS-LLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFS 163
A+ IN GL T+P + L PI++KNIH+ KHGSDS YD GRF+P FE IF
Sbjct: 77 VGAVFINGGLGPKTIPENTKTGLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFK 136
Query: 164 KNARTAPDKLTFGDIWRMTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRC 223
K+A T PD LT ++ + + R D G + EW +LY L KD++GFL K+ VR
Sbjct: 137 KHAHTRPDALTDKELKELLQSNREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAV 196
Query: 224 FDGSLFESIAQQRREAHEK 242
+DGSLF + Q+++ A +K
Sbjct: 197 YDGSLFAKMEQEKQSAKKK 215
>Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD
Length = 373
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 107/171 (62%)
Query: 66 MSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLPSWIPS 125
++ LQ+H AFFD DGDGIV ETY GLR LG +S A IN LS T P +
Sbjct: 196 VTALQKHAAFFDKDGDGIVSLSETYDGLRALGLGSGLSSLSAAFINGVLSPKTRPDNGTA 255
Query: 126 LLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTEGQ 185
I+I+NI++ HGSDSS YD+EGRF+ FE IF+K+A+T PD LT +I + +
Sbjct: 256 PRLSIYIENIYKGIHGSDSSAYDSEGRFVAEKFEEIFAKHAKTVPDALTSDEIDELLQAN 315
Query: 186 RVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQR 236
R D G +A+ EW +LY + KD++G LRKEAVR +DGSLF +A R
Sbjct: 316 RKPGDYTGWVAASSEWKILYKIGKDKDGLLRKEAVREVYDGSLFTKLAAAR 366
>Os02g0734500
Length = 182
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 69 LQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLPSWIPSLLF 128
LQ+HVAFFD D DGI+ ETY GLR LGF + + A IN + T P F
Sbjct: 22 LQKHVAFFDSDHDGIITFGETYRGLRTLGFGIFGATVSATFINGDIGPKTRPEDADGSWF 81
Query: 129 PIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTEG---Q 185
I+++NIH+ HGSD+ +D+EGR +A+T PD LT ++ M
Sbjct: 82 SIYVQNIHKGIHGSDTGAFDSEGR------------HAKTVPDGLTSDELDEMLHAYADH 129
Query: 186 RVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRRE 238
D G + + EW + AKD++ LRK+ VR +DGS F +A++ +
Sbjct: 130 TEHKDSSGWLQAATEWRATFEAAKDKDDILRKDTVRAVYDGSFFSKLAKENDD 182
>Os03g0222600 Caleosin related family protein
Length = 125
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 59/78 (75%)
Query: 15 LSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEGRDHRQMSVLQQHVA 74
L +VA A VT ER + +L+ Q+PKPYLARAL A D HP+GT GRD R MSVLQQH A
Sbjct: 47 LETVAPHAAVTGERKLNPNLQEQLPKPYLARALAAVDPSHPQGTRGRDARGMSVLQQHAA 106
Query: 75 FFDLDGDGIVYPWETYGG 92
FFD +GDGI+YPWET+ G
Sbjct: 107 FFDRNGDGIIYPWETFQG 124
>Os02g0734400 Caleosin related family protein
Length = 173
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%)
Query: 128 FPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTEGQRV 187
F I+I+NIH+ HGSD+ +D+EGRF+ F+ IF+K+A+T PD LT ++ M R
Sbjct: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
Query: 188 ALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRR 237
D G + + EW + L KD++GFLRK+ VR +DGS F +A +++
Sbjct: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKKK 166
>AK110656
Length = 162
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 105 FLAIAINVGLSYPTLP-------SWIPSLLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVN 157
F +AIN +SYPTLP +W+P I++ N+HR+KHGSD+ ++D G+F
Sbjct: 1 FAMLAINGAMSYPTLPRISKSLRNWLPDPYMRIYVANMHRSKHGSDTESFDRRGQFRQSQ 60
Query: 158 FESIFSK-NARTAPDKLTFGDIWRMTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLR 216
E+ S+ ++R D L++GD+ M +R DL G A EW Y+L +G++R
Sbjct: 61 LEAELSECSSRYGKDALSYGDVLAMFRERRDVFDLFGMTAFLLEWSATYMLIWPADGYMR 120
Query: 217 KEAVRRCFDGSLFESIAQQRREA 239
K+ + +DGSLF +A + +
Sbjct: 121 KDDILGVYDGSLFVVLAHRYKNG 143
>Os06g0254300 Caleosin related family protein
Length = 157
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 114 LSYPTLPSWIPSLLFP--------------IHIKNIHRAKHGSDSSTYDNEGRFMPVNFE 159
L Y T I +LFP I+IKNI++ HGSD+ D +GRF+P FE
Sbjct: 4 LIYCTHKEIIDQILFPYSNVQKDAPLPHLSIYIKNIYKGMHGSDTGALDAKGRFVPAKFE 63
Query: 160 SIFSKNARTAPDKLTFGDIWRMTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEA 219
IFSK+A+ PD LT ++ M R D A EW L+Y LA D+ G+ K++
Sbjct: 64 EIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLASDKNGYFHKDS 123
Query: 220 VRRCFDGSLFESIAQQR 236
VR +DGS+F + ++R
Sbjct: 124 VRGIYDGSVFVKLEEER 140
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,491,238
Number of extensions: 364177
Number of successful extensions: 892
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 887
Number of HSP's successfully gapped: 9
Length of query: 244
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 146
Effective length of database: 11,918,829
Effective search space: 1740149034
Effective search space used: 1740149034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)