Os06g0254700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Caleosin related family protein.
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Os06g0254700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Caleosin related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 412.59 | 0.954 | 9.57 | -8.54 | 0.598 | 3.4 | 1.5 | -9.57 | -1.33 | 8.99 | 26.22 | 1242 | -- | -- |
| 433.8 | 0.97 | 9.27 | -6.2 | 0.624 | 2.44 | 1.82 | -- | -0.779 | 9.1 | 26.51 | 1196 | -- | -- |
| 419.8 | 0.954 | 9.58 | -8.52 | 0.607 | 3.44 | -- | -9.86 | -1.34 | 9.49 | 26.14 | 1224 | -- | -- |
| 444.69 | 0.982 | 9.28 | -6.15 | 0.611 | 2.4 | -- | -- | -0.802 | 9.45 | 26.44 | 1212 | -- | -- |
| 437.7 | 0.974 | 9.59 | -8.52 | -- | 3.27 | -- | -9.4 | -1.33 | -- | 26.22 | 1293 | -- | -- |
| 663.25 | 1.21 | 9.26 | -5.46 | 0.448 | -- | 2.1 | -- | -0.705 | 6.79 | -- | -- | -- | -- |
| 674.39 | 1.22 | 9.26 | -5.42 | 0.458 | -- | -- | -- | -0.711 | 6.5 | -- | -- | -- | -- |
| 460.12 | 0.999 | 9.28 | -6.14 | -- | 2.26 | -- | -- | -0.766 | -- | 26.6 | 1293 | -- | -- |
| 1374.06 | 1.73 | 9.03 | -- | 0.586 | 1.35 | -- | -- | 0.162 | 8.41 | 28.7 | 1170 | -- | -- |
| 685.31 | 1.22 | 9.27 | -5.41 | -- | -- | -- | -- | -0.701 | -- | -- | -- | -- | -- |
| 1449.61 | 1.78 | 9.12 | -- | 0.395 | -- | -- | -- | -0.107 | 7.28 | -- | -- | -- | -- |
| 1379.75 | 1.73 | 9.09 | -- | -- | 1.22 | -- | -- | 0.134 | -- | 31.54 | 1197 | -- | -- |
| 1457.91 | 1.78 | 9.13 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 409.86 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 9 | 412.26 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 21 |
| 11 | 412.46 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 17 | 412.94 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 23 | 413.30 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 45 | 414.25 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 48 | 414.36 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 49 | 414.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 56 | 414.54 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 67 | 414.85 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 75 | 415.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 104 | 415.77 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 105 | 415.78 | wind | 5 | 43200 | > th | dose dependent | sin | 15 | NA |
| 110 | 415.84 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 111 | 415.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 19 |
| 138 | 416.18 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 22 |
| 211 | 416.85 | wind | 3 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 256 | 417.26 | wind | 3 | 43200 | > th | dose dependent | no | NA | NA |
| 261 | 417.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 287 | 417.52 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 290 | 417.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 311 | 417.69 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 313 | 417.70 | wind | 5 | 43200 | > th | dose independent | sin | 15 | NA |
| 346 | 418.03 | wind | 5 | 43200 | < th | dose independent | sin | 14 | NA |
| 450 | 418.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 557 | 419.79 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 598 | 420.49 | wind | 3 | 43200 | > th | dose dependent | sin | 1 | NA |
| 656 | 421.17 | wind | 5 | 43200 | < th | dose independent | sin | 0 | NA |
| 666 | 421.32 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 734 | 422.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 778 | 422.65 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 836 | 423.26 | wind | 9 | 43200 | > th | dose dependent | sin | 14 | NA |
| 864 | 423.58 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 950 | 424.51 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |