BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0254700 Os06g0254700|AK104598
(215 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0254700 Caleosin related family protein 360 e-100
Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD 200 6e-52
Os04g0510900 Similar to Embryo-specific protein 1 (ATS1) 161 3e-40
Os02g0734400 Caleosin related family protein 154 3e-38
Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD 154 4e-38
Os02g0734500 154 4e-38
Os06g0254300 Caleosin related family protein 147 6e-36
AK110656 74 7e-14
>Os06g0254700 Caleosin related family protein
Length = 215
Score = 360 bits (923), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/215 (82%), Positives = 178/215 (82%)
Query: 1 MASKPADXXXXXXXXXXXXRDXXXXXXXXXXXVYRSELTPLQKHVAFFDRNKDGIIYPSE 60
MASKPAD RD VYRSELTPLQKHVAFFDRNKDGIIYPSE
Sbjct: 1 MASKPADVTATGGGGVAVVRDNNNNAGGGEAEVYRSELTPLQKHVAFFDRNKDGIIYPSE 60
Query: 61 TYQGFRXXXXXXXXXXXXXXFINGGLGPKTIPENTKTGLKLPIYVKNIHKGKHGSDSGVY 120
TYQGFR FINGGLGPKTIPENTKTGLKLPIYVKNIHKGKHGSDSGVY
Sbjct: 61 TYQGFRAIGAGVVLSAVGAVFINGGLGPKTIPENTKTGLKLPIYVKNIHKGKHGSDSGVY 120
Query: 121 DANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNREPKDFKGWLGGFTEWKVLYYL 180
DANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNREPKDFKGWLGGFTEWKVLYYL
Sbjct: 121 DANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNREPKDFKGWLGGFTEWKVLYYL 180
Query: 181 CKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKKK 215
CKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKKK
Sbjct: 181 CKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKKK 215
>Os02g0734600 Similar to EFA27 for EF hand, abscisic acid, 27kD
Length = 373
Score = 200 bits (508), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 38 LTPLQKHVAFFDRNKDGIIYPSETYQGFRXXXXXXXXXXXXXXFINGGLGPKTIPENTKT 97
+T LQKH AFFD++ DGI+ SETY G R FING L PKT P+N T
Sbjct: 196 VTALQKHAAFFDKDGDGIVSLSETYDGLRALGLGSGLSSLSAAFINGVLSPKTRPDN-GT 254
Query: 98 GLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQS 157
+L IY++NI+KG HGSDS YD+ GRFV EKFEEIF KHA T PDALT E+ ELLQ+
Sbjct: 255 APRLSIYIENIYKGIHGSDSSAYDSEGRFVAEKFEEIFAKHAKTVPDALTSDEIDELLQA 314
Query: 158 NREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEK 209
NR+P D+ GW+ +EWK+LY + KDKDG L K+ VR VYDGSLF K+ +
Sbjct: 315 NRKPGDYTGWVAASSEWKILYKIGKDKDGLLRKEAVREVYDGSLFTKLAAAR 366
>Os04g0510900 Similar to Embryo-specific protein 1 (ATS1)
Length = 310
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
Query: 38 LTPLQKHVAFFDRNKDGIIYPSETYQGFRXXXXXXXXXXXXXXFINGGLGPKTIPENTKT 97
L+ LQ+HVAFFDR+ +GIIYP ETY+G R +N + T+P +
Sbjct: 133 LSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPS 192
Query: 98 GLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQS 157
PIY+ NIH+ KHGSDSG YD GRF+P FE IF K+A T PD LT +E+ ++ +
Sbjct: 193 PF-FPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEG 251
Query: 158 NREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKK 214
NRE D GW EW +LY L +D++G+L ++ +R +YDGSLF + +++ K
Sbjct: 252 NREVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQREQHAK 308
>Os02g0734400 Caleosin related family protein
Length = 173
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 89 KTIPENTKTGLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTD 148
K EN T + IY++NIHKG HGSD+G +D+ GRFV EKF+EIF KHA T PD LT
Sbjct: 46 KCTQENA-TASRFSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTA 104
Query: 149 KELKELLQSNREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQE 208
EL E+L++NREPKD+KGW+G TEW+ + L KDKDGFL KDTVR VYDGS F+K+ +
Sbjct: 105 AELDEMLRANREPKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASK 164
Query: 209 KQ 210
K+
Sbjct: 165 KK 166
>Os04g0511200 EFA27 for EF hand, abscisic acid, 27kD
Length = 244
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 106/179 (59%), Gaps = 1/179 (0%)
Query: 37 ELTPLQKHVAFFDRNKDGIIYPSETYQGFRXXXXXXXXXXXXXXFINGGLGPKTIPENTK 96
+++ LQ+HVAFFD + DGI+YP ETY G R IN GL T+P
Sbjct: 65 QMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLPSWIP 124
Query: 97 TGLKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQ 156
+ L PI++KNIH+ KHGSDS YD GRF+P FE IF K+A T PD LT ++ + +
Sbjct: 125 S-LLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWRMTE 183
Query: 157 SNREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAKKK 215
R D G + EW +LY L KD++GFL K+ VR +DGSLF + Q+++ A +K
Sbjct: 184 GQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAHEK 242
>Os02g0734500
Length = 182
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 39 TPLQKHVAFFDRNKDGIIYPSETYQGFRXXXXXXXXXXXXXXFINGGLGPKTIPENTKTG 98
T LQKHVAFFD + DGII ETY+G R FING +GPKT PE+ G
Sbjct: 20 TELQKHVAFFDSDHDGIITFGETYRGLRTLGFGIFGATVSATFINGDIGPKTRPEDAD-G 78
Query: 99 LKLPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQS- 157
IYV+NIHKG HGSD+G +D+ GR HA T PD LT EL E+L +
Sbjct: 79 SWFSIYVQNIHKGIHGSDTGAFDSEGR------------HAKTVPDGLTSDELDEMLHAY 126
Query: 158 --NREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEK 209
+ E KD GWL TEW+ + KDKD L KDTVRAVYDGS F+K+ +E
Sbjct: 127 ADHTEHKDSSGWLQAATEWRATFEAAKDKDDILRKDTVRAVYDGSFFSKLAKEN 180
>Os06g0254300 Caleosin related family protein
Length = 157
Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 85/113 (75%)
Query: 101 LPIYVKNIHKGKHGSDSGVYDANGRFVPEKFEEIFKKHAHTRPDALTDKELKELLQSNRE 160
L IY+KNI+KG HGSD+G DA GRFVP KFEEIF KHA RPDALT E+KE++ +NR+
Sbjct: 32 LSIYIKNIYKGMHGSDTGALDAKGRFVPAKFEEIFSKHAKNRPDALTSLEVKEMILANRD 91
Query: 161 PKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTVRAVYDGSLFAKMEQEKQSAK 213
P D + W EW ++Y L DK+G+ HKD+VR +YDGS+F K+E+E+ S++
Sbjct: 92 PDDPQSWAAPIQEWGLIYGLASDKNGYFHKDSVRGIYDGSVFVKLEEERASSQ 144
>AK110656
Length = 162
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 82 INGGLGPKTIPENTKTGLK--LP-----IYVKNIHKGKHGSDSGVYDANGRFVPEKFE-E 133
ING + T+P +K+ L+ LP IYV N+H+ KHGSD+ +D G+F + E E
Sbjct: 6 INGAMSYPTLPRISKS-LRNWLPDPYMRIYVANMHRSKHGSDTESFDRRGQFRQSQLEAE 64
Query: 134 IFKKHAHTRPDALTDKELKELLQSNREPKDFKGWLGGFTEWKVLYYLCKDKDGFLHKDTV 193
+ + + DAL+ ++ + + R+ D G EW Y L DG++ KD +
Sbjct: 65 LSECSSRYGKDALSYGDVLAMFRERRDVFDLFGMTAFLLEWSATYMLIWPADGYMRKDDI 124
Query: 194 RAVYDGSLFAKMEQ 207
VYDGSLF +
Sbjct: 125 LGVYDGSLFVVLAH 138
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,393,141
Number of extensions: 250105
Number of successful extensions: 439
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 432
Number of HSP's successfully gapped: 8
Length of query: 215
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 118
Effective length of database: 11,971,043
Effective search space: 1412583074
Effective search space used: 1412583074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)